RNA–Protein interactions for RNA: ENST00000409457.5

AGAP1-204, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 1, humanhuman

TSL 1 (best) BASIC

Gene AGAP1, Length 2,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP1-204ENST00000409457 EID1Q9Y6B2 187 aa39.45■■■■□ 3.91
AGAP1-204ENST00000409457 TMC1Q8TDI8 760 aa39.44■■■■□ 3.9
AGAP1-204ENST00000409457 TECPR2O15040 1411 aa39.44■■■■□ 3.9
AGAP1-204ENST00000409457 MED14O60244 1454 aa39.42■■■■□ 3.9
AGAP1-204ENST00000409457 ZNF142P52746 1687 aaPredicted RBP39.41■■■■□ 3.9
AGAP1-204ENST00000409457 CPS1P31327 1500 aa39.41■■■■□ 3.9
AGAP1-204ENST00000409457 BCANQ96GW7 911 aa39.4■■■■□ 3.9
AGAP1-204ENST00000409457 MINK1Q8N4C8 1332 aaPredicted RBP39.4■■■■□ 3.9
AGAP1-204ENST00000409457 SIRT1Q96EB6 747 aa39.39■■■■□ 3.9
AGAP1-204ENST00000409457 CARD14Q9BXL6 1004 aa39.39■■■■□ 3.9
AGAP1-204ENST00000409457 HNRNPUQ00839 825 aaKnown RBP eCLIP39.38■■■■□ 3.89
AGAP1-204ENST00000409457 SETD1BQ9UPS6 1966 aaKnown RBP39.38■■■■□ 3.89
AGAP1-204ENST00000409457 PNISRQ8TF01 805 aaKnown RBP39.38■■■■□ 3.89
AGAP1-204ENST00000409457 SLC12A5Q9H2X9 1139 aa39.38■■■■□ 3.89
AGAP1-204ENST00000409457 FAM135BQ49AJ0 1406 aa39.37■■■■□ 3.89
AGAP1-204ENST00000409457 NINLQ9Y2I6 1382 aa39.37■■■■□ 3.89
AGAP1-204ENST00000409457 SCAF1Q9H7N4 1312 aaKnown RBP39.36■■■■□ 3.89
AGAP1-204ENST00000409457 CABP2Q9NPB3 220 aa39.36■■■■□ 3.89
AGAP1-204ENST00000409457 USP32Q8NFA0 1604 aa39.35■■■■□ 3.89
AGAP1-204ENST00000409457 ATAD2Q6PL18 1390 aa39.34■■■■□ 3.89
AGAP1-204ENST00000409457 PLEKHH1Q9ULM0 1364 aa39.34■■■■□ 3.89
AGAP1-204ENST00000409457 WAPLQ7Z5K2 1190 aa39.33■■■■□ 3.89
AGAP1-204ENST00000409457 DIP2AQ14689 1571 aa39.32■■■■□ 3.89
AGAP1-204ENST00000409457 SRPK2P78362 688 aaKnown RBP39.31■■■■□ 3.88
AGAP1-204ENST00000409457 ANKRD36BQ8N2N9 1353 aa39.31■■■■□ 3.88
AGAP1-204ENST00000409457 NSD3Q9BZ95 1437 aa39.29■■■■□ 3.88
AGAP1-204ENST00000409457 CDK19Q9BWU1 502 aa39.26■■■■□ 3.88
AGAP1-204ENST00000409457 GTF3C3Q9Y5Q9 886 aa39.26■■■■□ 3.88
AGAP1-204ENST00000409457 TBX22Q9Y458 520 aa39.25■■■■□ 3.87
AGAP1-204ENST00000409457 PPP2R1AP30153 589 aa39.23■■■■□ 3.87
AGAP1-204ENST00000409457 SLC26A8Q96RN1 970 aa39.2■■■■□ 3.87
AGAP1-204ENST00000409457 PTPRUQ92729 1446 aa39.2■■■■□ 3.87
AGAP1-204ENST00000409457 ROBO2Q9HCK4 1378 aa39.19■■■■□ 3.86
AGAP1-204ENST00000409457 ZBED9Q6R2W3 1325 aa39.16■■■■□ 3.86
AGAP1-204ENST00000409457 ADGRB2O60241 1585 aa39.15■■■■□ 3.86
AGAP1-204ENST00000409457 CD163L1Q9NR16 1453 aa39.15■■■■□ 3.86
AGAP1-204ENST00000409457 A0A1W2PP64 1363 aa39.15■■■■□ 3.86
AGAP1-204ENST00000409457 WASLO00401 505 aaPredicted RBP39.14■■■■□ 3.86
AGAP1-204ENST00000409457 CGNL1Q0VF96 1302 aa39.13■■■■□ 3.85
AGAP1-204ENST00000409457 SIPA1L2Q9P2F8 1722 aaPredicted RBP39.12■■■■□ 3.85
AGAP1-204ENST00000409457 NSD2O96028 1365 aa39.12■■■■□ 3.85
AGAP1-204ENST00000409457 TERF2IPQ9NYB0 399 aa39.11■■■■□ 3.85
AGAP1-204ENST00000409457 INSRP06213 1382 aa39.11■■■■□ 3.85
AGAP1-204ENST00000409457 XRN1Q8IZH2 1706 aaKnown RBP39.1■■■■□ 3.85
AGAP1-204ENST00000409457 PTCH1Q13635 1447 aa39.1■■■■□ 3.85
AGAP1-204ENST00000409457 ANKLE2Q86XL3 938 aa39.08■■■■□ 3.85
AGAP1-204ENST00000409457 ATP7BP35670 1465 aa39.08■■■■□ 3.85
AGAP1-204ENST00000409457 PIK3R4Q99570 1358 aa39.08■■■■□ 3.85
AGAP1-204ENST00000409457 AMOTL2Q9Y2J4 779 aa39.06■■■■□ 3.84
AGAP1-204ENST00000409457 CABP1Q9NZU7 370 aa39.04■■■■□ 3.84
AGAP1-204ENST00000409457 ANKRD26Q9UPS8 1709 aa39.03■■■■□ 3.84
AGAP1-204ENST00000409457 HDGFL2Q7Z4V5 671 aaPredicted RBP39.02■■■■□ 3.84
AGAP1-204ENST00000409457 MORC1Q86VD1 984 aa39.02■■■■□ 3.84
AGAP1-204ENST00000409457 BLMP54132 1417 aaPredicted RBP38.98■■■■□ 3.83
AGAP1-204ENST00000409457 PPIP5K1Q6PFW1 1433 aa38.97■■■■□ 3.83
AGAP1-204ENST00000409457 CHD2O14647 1828 aaKnown RBP38.96■■■■□ 3.83
AGAP1-204ENST00000409457 KIF20BQ96Q89 1820 aa38.96■■■■□ 3.83
AGAP1-204ENST00000409457 NUDT16Q96DE0 195 aaKnown RBP38.96■■■■□ 3.83
AGAP1-204ENST00000409457 CDC42BPGQ6DT37 1551 aa38.94■■■■□ 3.82
AGAP1-204ENST00000409457 CPSF1Q10570 1443 aaKnown RBP38.93■■■■□ 3.82
AGAP1-204ENST00000409457 TOPAZ1Q8N9V7 1692 aa38.93■■■■□ 3.82
AGAP1-204ENST00000409457 CCDC61Q9Y6R9 512 aa38.92■■■■□ 3.82
AGAP1-204ENST00000409457 AKAP12Q02952 1782 aa38.92■■■■□ 3.82
AGAP1-204ENST00000409457 POLR3AO14802 1390 aaPredicted RBP38.91■■■■□ 3.82
AGAP1-204ENST00000409457 ITSN1Q15811 1721 aa38.9■■■■□ 3.82
AGAP1-204ENST00000409457 MON2Q7Z3U7 1717 aa38.9■■■■□ 3.82
AGAP1-204ENST00000409457 PRR36Q9H6K5 1346 aa38.88■■■■□ 3.81
AGAP1-204ENST00000409457 WDR43Q15061 677 aaKnown RBP eCLIP38.87■■■■□ 3.81
AGAP1-204ENST00000409457 FYB1O15117 783 aa38.87■■■■□ 3.81
AGAP1-204ENST00000409457 NPHP4O75161 1426 aaPredicted RBP38.87■■■■□ 3.81
AGAP1-204ENST00000409457 ADAMTS8Q9UP79 889 aa38.86■■■■□ 3.81
AGAP1-204ENST00000409457 KCNA6P17658 529 aa38.84■■■■□ 3.81
AGAP1-204ENST00000409457 EDC4Q6P2E9 1401 aaKnown RBP38.83■■■■□ 3.81
AGAP1-204ENST00000409457 PELP1Q8IZL8 1130 aaKnown RBP38.82■■■■□ 3.81
AGAP1-204ENST00000409457 TNNT2P45379 298 aaPredicted RBP38.81■■■■□ 3.8
AGAP1-204ENST00000409457 GGNBP2Q9H3C7 697 aa38.81■■■■□ 3.8
AGAP1-204ENST00000409457 SHPRHQ149N8 1683 aa38.8■■■■□ 3.8
AGAP1-204ENST00000409457 NCKAP5LQ9HCH0 1330 aa38.79■■■■□ 3.8
AGAP1-204ENST00000409457 SMG6Q86US8 1419 aaKnown RBP38.76■■■■□ 3.79
AGAP1-204ENST00000409457 ZNF692Q9BU19 519 aaPredicted RBP38.75■■■■□ 3.79
AGAP1-204ENST00000409457 MTHFSP49914 203 aa38.75■■■■□ 3.79
AGAP1-204ENST00000409457 PLEKHG3A1L390 1219 aa38.74■■■■□ 3.79
AGAP1-204ENST00000409457 FMN2Q9NZ56 1722 aa38.72■■■■□ 3.79
AGAP1-204ENST00000409457 NRKQ7Z2Y5 1582 aa38.71■■■■□ 3.79
AGAP1-204ENST00000409457 RGPD8O14715 1765 aaPredicted RBP38.71■■■■□ 3.79
AGAP1-204ENST00000409457 SENP3-EIF4A1A0A087X0R7 540 aa38.7■■■■□ 3.79
AGAP1-204ENST00000409457 SUGP2Q8IX01 1082 aaKnown RBP eCLIP38.7■■■■□ 3.791e-6■■□□□ 14.1
AGAP1-204ENST00000409457 NKTRP30414 1462 aaKnown RBP38.7■■■■□ 3.79
AGAP1-204ENST00000409457 NALCNQ8IZF0 1738 aa38.7■■■■□ 3.79
AGAP1-204ENST00000409457 CFAP53Q96M91 514 aa38.7■■■■□ 3.79
AGAP1-204ENST00000409457 ANKARQ7Z5J8 1434 aa38.68■■■■□ 3.78
AGAP1-204ENST00000409457 NWD1Q149M9 1564 aa38.68■■■■□ 3.78
AGAP1-204ENST00000409457 NUDCQ9Y266 331 aa38.66■■■■□ 3.78
AGAP1-204ENST00000409457 ACEP12821 1306 aa38.65■■■■□ 3.78
AGAP1-204ENST00000409457 NUTM2FA1L443 756 aa38.64■■■■□ 3.78
AGAP1-204ENST00000409457 PDE3BQ13370 1112 aa38.64■■■■□ 3.78
AGAP1-204ENST00000409457 USP6P35125 1406 aa38.6■■■■□ 3.77
AGAP1-204ENST00000409457 SUPT16HQ9Y5B9 1047 aaKnown RBP38.6■■■■□ 3.77
AGAP1-204ENST00000409457 COL3A1P02461 1466 aaPredicted RBP38.59■■■■□ 3.77
AGAP1-204ENST00000409457 NME9Q86XW9 330 aa38.59■■■■□ 3.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms