RNA–Protein interactions for RNA: ENST00000407142.5

PPM1F-203, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PPM1F, Length 5,587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-203ENST00000407142 PLIN1O60240 522 aa18.62■□□□□ 0.57
PPM1F-203ENST00000407142 ABTB2Q8N961 1025 aa18.62■□□□□ 0.57
PPM1F-203ENST00000407142 NECTIN2Q92692 538 aa18.62■□□□□ 0.57
PPM1F-203ENST00000407142 TEX35Q5T0J7 233 aa18.62■□□□□ 0.57
PPM1F-203ENST00000407142 DDX19BQ9UMR2 479 aa18.62■□□□□ 0.57
PPM1F-203ENST00000407142 ZBED9Q6R2W3 1325 aa18.62■□□□□ 0.57
PPM1F-203ENST00000407142 CPLX2Q6PUV4 134 aaKnown RBP18.61■□□□□ 0.57
PPM1F-203ENST00000407142 SMG6Q86US8 1419 aaKnown RBP18.61■□□□□ 0.57
PPM1F-203ENST00000407142 ANKLE2Q86XL3 938 aa18.61■□□□□ 0.57
PPM1F-203ENST00000407142 GGNBP2Q9H3C7 697 aa18.61■□□□□ 0.57
PPM1F-203ENST00000407142 PRM3Q9NNZ6 103 aa18.6■□□□□ 0.57
PPM1F-203ENST00000407142 CHMP5Q9NZZ3 219 aa18.6■□□□□ 0.57
PPM1F-203ENST00000407142 TCEAL9Q9UHQ7 104 aa18.6■□□□□ 0.57
PPM1F-203ENST00000407142 HSP90AB4PQ58FF6 505 aa18.6■□□□□ 0.57
PPM1F-203ENST00000407142 SLC52A1Q9NWF4 448 aa18.6■□□□□ 0.57
PPM1F-203ENST00000407142 AAMPQ13685 434 aa18.59■□□□□ 0.57
PPM1F-203ENST00000407142 RIC3Q7Z5B4 369 aa18.59■□□□□ 0.57
PPM1F-203ENST00000407142 FAM43AQ8N2R8 423 aa18.59■□□□□ 0.57
PPM1F-203ENST00000407142 SCAPERQ9BY12 1400 aa18.59■□□□□ 0.57
PPM1F-203ENST00000407142 SF3B2Q13435 895 aaKnown RBP18.59■□□□□ 0.57
PPM1F-203ENST00000407142 RAD21O60216 631 aa18.58■□□□□ 0.57
PPM1F-203ENST00000407142 PLEKHO1Q53GL0 409 aaPredicted RBP18.58■□□□□ 0.57
PPM1F-203ENST00000407142 HFM1A2PYH4 1435 aa18.58■□□□□ 0.56
PPM1F-203ENST00000407142 TPM2P07951 284 aa18.58■□□□□ 0.56
PPM1F-203ENST00000407142 HMOX1P09601 288 aa18.58■□□□□ 0.56
PPM1F-203ENST00000407142 GAS2L2Q8NHY3 880 aa18.57■□□□□ 0.56
PPM1F-203ENST00000407142 EHBP1L1Q8N3D4 1523 aa18.57■□□□□ 0.56
PPM1F-203ENST00000407142 APPP05067 770 aa18.57■□□□□ 0.56
PPM1F-203ENST00000407142 C9orf84Q5VXU9 1444 aa18.56■□□□□ 0.56
PPM1F-203ENST00000407142 TROQ12816 1431 aaPredicted RBP18.56■□□□□ 0.56
PPM1F-203ENST00000407142 DZIP1LQ8IYY4 767 aaKnown RBP18.55■□□□□ 0.56
PPM1F-203ENST00000407142 CWC22Q9HCG8 908 aaKnown RBP18.55■□□□□ 0.56
PPM1F-203ENST00000407142 ZKSCAN1P17029 563 aaPredicted RBP18.55■□□□□ 0.56
PPM1F-203ENST00000407142 POLA1P09884 1462 aaPredicted RBP18.55■□□□□ 0.56
PPM1F-203ENST00000407142 COG6Q9Y2V7 657 aa18.55■□□□□ 0.56
PPM1F-203ENST00000407142 PATL2C9JE40 543 aaKnown RBP18.55■□□□□ 0.56
PPM1F-203ENST00000407142 CFAP70Q5T0N1 1121 aa18.55■□□□□ 0.56
PPM1F-203ENST00000407142 HECW1Q76N89 1606 aa18.55■□□□□ 0.56
PPM1F-203ENST00000407142 WWC1Q8IX03 1113 aa18.55■□□□□ 0.56
PPM1F-203ENST00000407142 REC8O95072 547 aa18.54■□□□□ 0.56
PPM1F-203ENST00000407142 TRDNQ13061 729 aa18.54■□□□□ 0.56
PPM1F-203ENST00000407142 TATP17735 454 aaPredicted RBP18.54■□□□□ 0.56
PPM1F-203ENST00000407142 PRAM1Q96QH2 718 aa18.54■□□□□ 0.56
PPM1F-203ENST00000407142 MCTP1Q6DN14 999 aa18.54■□□□□ 0.56
PPM1F-203ENST00000407142 DNMBPQ6XZF7 1577 aa18.53■□□□□ 0.56
PPM1F-203ENST00000407142 HOMER1Q86YM7 354 aa18.53■□□□□ 0.56
PPM1F-203ENST00000407142 STRN4Q9NRL3 753 aa18.53■□□□□ 0.56
PPM1F-203ENST00000407142 TRIM29Q14134 588 aa18.53■□□□□ 0.56
PPM1F-203ENST00000407142 DHX16O60231 1041 aaKnown RBP18.52■□□□□ 0.56
PPM1F-203ENST00000407142 ZNF692Q9BU19 519 aaPredicted RBP18.52■□□□□ 0.56
PPM1F-203ENST00000407142 AIMP1Q12904 312 aaKnown RBP18.52■□□□□ 0.55
PPM1F-203ENST00000407142 KIF6Q6ZMV9 814 aa18.52■□□□□ 0.55
PPM1F-203ENST00000407142 RNF20Q5VTR2 975 aa18.51■□□□□ 0.55
PPM1F-203ENST00000407142 IPO7O95373 1038 aaKnown RBP18.51■□□□□ 0.55
PPM1F-203ENST00000407142 ERC2O15083 957 aa18.51■□□□□ 0.55
PPM1F-203ENST00000407142 ERICH2A1L162 156 aa18.5■□□□□ 0.55
PPM1F-203ENST00000407142 RPGRIP1LQ68CZ1 1315 aa18.5■□□□□ 0.55
PPM1F-203ENST00000407142 RAPGEF3O95398 923 aa18.49■□□□□ 0.55
PPM1F-203ENST00000407142 CCDC7Q96M83 1385 aa18.49■□□□□ 0.55
PPM1F-203ENST00000407142 RBM42Q9BTD8 480 aaKnown RBP18.49■□□□□ 0.55
PPM1F-203ENST00000407142 NUTM2BA6NNL0 878 aaPredicted RBP18.49■□□□□ 0.55
PPM1F-203ENST00000407142 NUTM2EB1AL46 878 aaPredicted RBP18.49■□□□□ 0.55
PPM1F-203ENST00000407142 NUTM2AQ8IVF1 878 aaPredicted RBP18.49■□□□□ 0.55
PPM1F-203ENST00000407142 ARGLU1Q9NWB6 273 aaPredicted RBP18.49■□□□□ 0.55
PPM1F-203ENST00000407142 BICD2Q8TD16 824 aa18.48■□□□□ 0.55
PPM1F-203ENST00000407142 CPLX1O14810 134 aa18.48■□□□□ 0.55
PPM1F-203ENST00000407142 CALRP27797 417 aaKnown RBP18.48■□□□□ 0.55
PPM1F-203ENST00000407142 NUCB2P80303 420 aa18.48■□□□□ 0.55
PPM1F-203ENST00000407142 ANO8Q9HCE9 1232 aaPredicted RBP18.48■□□□□ 0.55
PPM1F-203ENST00000407142 ANO2Q9NQ90 1003 aa18.48■□□□□ 0.55
PPM1F-203ENST00000407142 KIF7Q2M1P5 1343 aa18.47■□□□□ 0.55
PPM1F-203ENST00000407142 NOM1Q5C9Z4 860 aaKnown RBP18.47■□□□□ 0.55
PPM1F-203ENST00000407142 ANKRD20A12PQ8NF67 263 aa18.47■□□□□ 0.55
PPM1F-203ENST00000407142 SYNJ1O43426 1573 aa18.47■□□□□ 0.55
PPM1F-203ENST00000407142 NFKBIBQ15653 356 aa18.47■□□□□ 0.55
PPM1F-203ENST00000407142 CCDC30Q5VVM6 783 aa18.47■□□□□ 0.55
PPM1F-203ENST00000407142 PCMTD1Q96MG8 357 aaPredicted RBP18.47■□□□□ 0.55
PPM1F-203ENST00000407142 UBTFL1P0CB47 393 aaPredicted RBP18.46■□□□□ 0.55
PPM1F-203ENST00000407142 HMGB2P26583 209 aaKnown RBP18.46■□□□□ 0.55
PPM1F-203ENST00000407142 TOM1L2Q6ZVM7 507 aa18.46■□□□□ 0.55
PPM1F-203ENST00000407142 NEUROD6Q96NK8 337 aa18.46■□□□□ 0.55
PPM1F-203ENST00000407142 MRE11P49959 708 aa18.46■□□□□ 0.55
PPM1F-203ENST00000407142 MTERF4Q7Z6M4 381 aaKnown RBP18.46■□□□□ 0.55
PPM1F-203ENST00000407142 CCDC47Q96A33 483 aaKnown RBP18.46■□□□□ 0.55
PPM1F-203ENST00000407142 CDK19Q9BWU1 502 aa18.46■□□□□ 0.55
PPM1F-203ENST00000407142 IFT57Q9NWB7 429 aa18.46■□□□□ 0.55
PPM1F-203ENST00000407142 KIAA0586Q9BVV6 1533 aa18.46■□□□□ 0.54
PPM1F-203ENST00000407142 NFXL1Q6ZNB6 911 aa18.45■□□□□ 0.54
PPM1F-203ENST00000407142 TOP2BQ02880 1626 aa18.45■□□□□ 0.54
PPM1F-203ENST00000407142 MAP7D2Q96T17 732 aa18.45■□□□□ 0.54
PPM1F-203ENST00000407142 MNS1Q8NEH6 495 aa18.45■□□□□ 0.54
PPM1F-203ENST00000407142 ACBD3Q9H3P7 528 aa18.45■□□□□ 0.54
PPM1F-203ENST00000407142 MTHFSP49914 203 aa18.45■□□□□ 0.54
PPM1F-203ENST00000407142 SASS6Q6UVJ0 657 aa18.45■□□□□ 0.54
PPM1F-203ENST00000407142 R3HCC1Q9Y3T6 440 aaKnown RBP18.45■□□□□ 0.54
PPM1F-203ENST00000407142 CCDC39Q9UFE4 941 aa18.44■□□□□ 0.54
PPM1F-203ENST00000407142 SPG7Q9UQ90 795 aa18.44■□□□□ 0.54
PPM1F-203ENST00000407142 RTEL1-TNFRSF6BF6WH68 1400 aa18.44■□□□□ 0.54
PPM1F-203ENST00000407142 HOOK1Q9UJC3 728 aaKnown RBP18.44■□□□□ 0.54
PPM1F-203ENST00000407142 KIAA1107Q9UPP5 1409 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms