RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-222ENST00000406454 C22orf23Q9BZE7 217 aa16.23■□□□□ 0.19
CACNA1C-222ENST00000406454 MCTP1Q6DN14 999 aa16.23■□□□□ 0.19
CACNA1C-222ENST00000406454 ERC2O15083 957 aa16.23■□□□□ 0.19
CACNA1C-222ENST00000406454 EXOSC9Q06265 439 aaKnown RBP16.22■□□□□ 0.19
CACNA1C-222ENST00000406454 SYTL4Q96C24 671 aaPredicted RBP16.22■□□□□ 0.19
CACNA1C-222ENST00000406454 HECW1Q76N89 1606 aa16.22■□□□□ 0.19
CACNA1C-222ENST00000406454 TXNDC2Q86VQ3 553 aa16.22■□□□□ 0.19
CACNA1C-222ENST00000406454 UBTFL1P0CB47 393 aaPredicted RBP16.22■□□□□ 0.19
CACNA1C-222ENST00000406454 SLC12A5Q9H2X9 1139 aa16.22■□□□□ 0.19
CACNA1C-222ENST00000406454 CDC45O75419 566 aa16.22■□□□□ 0.19
CACNA1C-222ENST00000406454 GAS2L2Q8NHY3 880 aa16.21■□□□□ 0.19
CACNA1C-222ENST00000406454 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.21■□□□□ 0.19
CACNA1C-222ENST00000406454 RIC3Q7Z5B4 369 aa16.21■□□□□ 0.19
CACNA1C-222ENST00000406454 ARID3AQ99856 593 aa16.21■□□□□ 0.19
CACNA1C-222ENST00000406454 BECN2A8MW95 431 aa16.2■□□□□ 0.18
CACNA1C-222ENST00000406454 GOLGA6L19H0YKK7 550 aa16.2■□□□□ 0.18
CACNA1C-222ENST00000406454 APPP05067 770 aa16.19■□□□□ 0.18
CACNA1C-222ENST00000406454 CALRP27797 417 aaKnown RBP16.19■□□□□ 0.18
CACNA1C-222ENST00000406454 AIMP1Q12904 312 aaKnown RBP16.19■□□□□ 0.18
CACNA1C-222ENST00000406454 CPLX1O14810 134 aa16.19■□□□□ 0.18
CACNA1C-222ENST00000406454 GPRASP1Q5JY77 1395 aa16.19■□□□□ 0.18
CACNA1C-222ENST00000406454 TRIM29Q14134 588 aa16.19■□□□□ 0.18
CACNA1C-222ENST00000406454 SLC52A1Q9NWF4 448 aa16.19■□□□□ 0.18
CACNA1C-222ENST00000406454 NOL10Q9BSC4 688 aaKnown RBP16.18■□□□□ 0.18
CACNA1C-222ENST00000406454 TPM3P06753 285 aa16.18■□□□□ 0.18
CACNA1C-222ENST00000406454 GNAI3P08754 354 aa16.18■□□□□ 0.18
CACNA1C-222ENST00000406454 NUCB2P80303 420 aa16.18■□□□□ 0.18
CACNA1C-222ENST00000406454 PNISRQ8TF01 805 aaKnown RBP16.18■□□□□ 0.18
CACNA1C-222ENST00000406454 VPS53Q5VIR6 699 aa16.18■□□□□ 0.18
CACNA1C-222ENST00000406454 CCDC30Q5VVM6 783 aa16.18■□□□□ 0.18
CACNA1C-222ENST00000406454 AMOTL1Q8IY63 956 aa16.18■□□□□ 0.18
CACNA1C-222ENST00000406454 ABTB2Q8N961 1025 aa16.18■□□□□ 0.18
CACNA1C-222ENST00000406454 ERBINQ96RT1 1412 aa16.18■□□□□ 0.18
CACNA1C-222ENST00000406454 TRDNQ13061 729 aa16.18■□□□□ 0.18
CACNA1C-222ENST00000406454 PDE3AQ14432 1141 aa16.18■□□□□ 0.18
CACNA1C-222ENST00000406454 TWISTNBQ3B726 338 aaPredicted RBP16.17■□□□□ 0.18
CACNA1C-222ENST00000406454 DNMBPQ6XZF7 1577 aa16.17■□□□□ 0.18
CACNA1C-222ENST00000406454 NOC3LQ8WTT2 800 aaKnown RBP16.17■□□□□ 0.18
CACNA1C-222ENST00000406454 CC2D2AQ9P2K1 1620 aa16.17■□□□□ 0.18
CACNA1C-222ENST00000406454 TPD52L1Q16890 204 aaPredicted RBP16.17■□□□□ 0.18
CACNA1C-222ENST00000406454 CDK19Q9BWU1 502 aa16.17■□□□□ 0.18
CACNA1C-222ENST00000406454 SMC3Q9UQE7 1217 aa16.17■□□□□ 0.18
CACNA1C-222ENST00000406454 CABP1Q9NZU7 370 aa16.16■□□□□ 0.18
CACNA1C-222ENST00000406454 KIAA0586Q9BVV6 1533 aa16.16■□□□□ 0.18
CACNA1C-222ENST00000406454 RPGRIP1LQ68CZ1 1315 aa16.16■□□□□ 0.18
CACNA1C-222ENST00000406454 VPS37CA5D8V6 355 aaPredicted RBP16.15■□□□□ 0.18
CACNA1C-222ENST00000406454 MSH5O43196 834 aa16.15■□□□□ 0.18
CACNA1C-222ENST00000406454 PDZRN3Q9UPQ7 1066 aa16.15■□□□□ 0.18
CACNA1C-222ENST00000406454 VPS37DQ86XT2 251 aa16.15■□□□□ 0.18
CACNA1C-222ENST00000406454 NEUROD6Q96NK8 337 aa16.15■□□□□ 0.18
CACNA1C-222ENST00000406454 ESCO1Q5FWF5 840 aa16.15■□□□□ 0.18
CACNA1C-222ENST00000406454 PLEKHO1Q53GL0 409 aaPredicted RBP16.15■□□□□ 0.18
CACNA1C-222ENST00000406454 TSR2Q969E8 191 aaKnown RBP16.15■□□□□ 0.18
CACNA1C-222ENST00000406454 ZNF692Q9BU19 519 aaPredicted RBP16.15■□□□□ 0.18
CACNA1C-222ENST00000406454 NAIPQ13075 1403 aa16.14■□□□□ 0.17
CACNA1C-222ENST00000406454 PES1O00541 588 aaKnown RBP16.14■□□□□ 0.17
CACNA1C-222ENST00000406454 EPRSP07814 1512 aaKnown RBP16.14■□□□□ 0.17
CACNA1C-222ENST00000406454 BICD2Q8TD16 824 aa16.14■□□□□ 0.17
CACNA1C-222ENST00000406454 ANKRD30BQ9BXX2 1392 aa16.13■□□□□ 0.17
CACNA1C-222ENST00000406454 BCAR3O75815 825 aa16.13■□□□□ 0.17
CACNA1C-222ENST00000406454 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.13■□□□□ 0.17
CACNA1C-222ENST00000406454 CDK13Q14004 1512 aaKnown RBP16.13■□□□□ 0.17
CACNA1C-222ENST00000406454 SURF6O75683 361 aaKnown RBP16.12■□□□□ 0.17
CACNA1C-222ENST00000406454 ABCA10Q8WWZ4 1543 aa16.12■□□□□ 0.17
CACNA1C-222ENST00000406454 WDR63Q8IWG1 891 aa16.12■□□□□ 0.17
CACNA1C-222ENST00000406454 NINLQ9Y2I6 1382 aa16.12■□□□□ 0.17
CACNA1C-222ENST00000406454 NFXL1Q6ZNB6 911 aa16.12■□□□□ 0.17
CACNA1C-222ENST00000406454 CLASRPQ8N2M8 674 aaKnown RBP16.12■□□□□ 0.17
CACNA1C-222ENST00000406454 NOB1Q9ULX3 412 aaKnown RBP16.12■□□□□ 0.17
CACNA1C-222ENST00000406454 GCC1Q96CN9 775 aa16.12■□□□□ 0.17
CACNA1C-222ENST00000406454 SULT6B1Q6IMI4 303 aa16.11■□□□□ 0.17
CACNA1C-222ENST00000406454 THEMISQ8N1K5 641 aaPredicted RBP16.11■□□□□ 0.17
CACNA1C-222ENST00000406454 CNTROBQ8N137 903 aa16.11■□□□□ 0.17
CACNA1C-222ENST00000406454 RAPGEF3O95398 923 aa16.11■□□□□ 0.17
CACNA1C-222ENST00000406454 PROSER2Q86WR7 435 aaPredicted RBP16.11■□□□□ 0.17
CACNA1C-222ENST00000406454 CT47B1P0C2W7 299 aaPredicted RBP16.1■□□□□ 0.17
CACNA1C-222ENST00000406454 RTEL1-TNFRSF6BF6WH68 1400 aa16.1■□□□□ 0.17
CACNA1C-222ENST00000406454 TSR1Q2NL82 804 aaKnown RBP16.1■□□□□ 0.17
CACNA1C-222ENST00000406454 AKNAQ7Z591 1439 aa16.1■□□□□ 0.17
CACNA1C-222ENST00000406454 WASHC4Q2M389 1173 aa16.1■□□□□ 0.17
CACNA1C-222ENST00000406454 ERICH2A1L162 156 aa16.1■□□□□ 0.17
CACNA1C-222ENST00000406454 TPM1P09493 284 aa16.1■□□□□ 0.17
CACNA1C-222ENST00000406454 FSD1Q9BTV5 496 aa16.09■□□□□ 0.17
CACNA1C-222ENST00000406454 CCDC184Q52MB2 194 aa16.09■□□□□ 0.17
CACNA1C-222ENST00000406454 ATAD2Q6PL18 1390 aa16.09■□□□□ 0.17
CACNA1C-222ENST00000406454 NFKBIBQ15653 356 aa16.09■□□□□ 0.17
CACNA1C-222ENST00000406454 C1orf115Q9H7X2 142 aa16.09■□□□□ 0.17
CACNA1C-222ENST00000406454 SUPT6HQ7KZ85 1726 aaKnown RBP16.09■□□□□ 0.17
CACNA1C-222ENST00000406454 SMG6Q86US8 1419 aaKnown RBP16.09■□□□□ 0.17
CACNA1C-222ENST00000406454 TPM2P07951 284 aa16.09■□□□□ 0.17
CACNA1C-222ENST00000406454 FBXO3Q9UK99 471 aa16.09■□□□□ 0.17
CACNA1C-222ENST00000406454 RALYLQ86SE5 291 aaKnown RBP16.09■□□□□ 0.17
CACNA1C-222ENST00000406454 GOLGA6L1Q8N7Z2 621 aa16.08■□□□□ 0.17
CACNA1C-222ENST00000406454 TRIM34Q9BYJ4 488 aa16.08■□□□□ 0.16
CACNA1C-222ENST00000406454 SLC4A2P04920 1241 aa16.08■□□□□ 0.16
CACNA1C-222ENST00000406454 RAD21O60216 631 aa16.07■□□□□ 0.16
CACNA1C-222ENST00000406454 GNAI2P04899 355 aa16.07■□□□□ 0.16
CACNA1C-222ENST00000406454 PSMA5P28066 241 aa16.07■□□□□ 0.16
CACNA1C-222ENST00000406454 DHX16O60231 1041 aaKnown RBP16.07■□□□□ 0.16
CACNA1C-222ENST00000406454 WDR97A6NE52 1622 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms