RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 TBX22Q9Y458 520 aa18.08■□□□□ 0.48
CEACAM1-206ENST00000403136 SLC26A8Q96RN1 970 aa18.07■□□□□ 0.48
CEACAM1-206ENST00000403136 CARD14Q9BXL6 1004 aa18.07■□□□□ 0.48
CEACAM1-206ENST00000403136 TULP4Q9NRJ4 1543 aa18.07■□□□□ 0.48
CEACAM1-206ENST00000403136 MYOM1P52179 1685 aa18.06■□□□□ 0.48
CEACAM1-206ENST00000403136 SRPK2P78362 688 aaKnown RBP18.06■□□□□ 0.48
CEACAM1-206ENST00000403136 MED14O60244 1454 aa18.06■□□□□ 0.48
CEACAM1-206ENST00000403136 CEP170BQ9Y4F5 1589 aaPredicted RBP18.06■□□□□ 0.48
CEACAM1-206ENST00000403136 CDK19Q9BWU1 502 aa18.05■□□□□ 0.48
CEACAM1-206ENST00000403136 PLEKHH1Q9ULM0 1364 aa18.05■□□□□ 0.48
CEACAM1-206ENST00000403136 SETD1BQ9UPS6 1966 aaKnown RBP18.05■□□□□ 0.48
CEACAM1-206ENST00000403136 TECPR2O15040 1411 aa18.05■□□□□ 0.48
CEACAM1-206ENST00000403136 FAM9BQ8IZU0 186 aa18.04■□□□□ 0.48
CEACAM1-206ENST00000403136 NPC1L1Q9UHC9 1359 aa18.04■□□□□ 0.48
CEACAM1-206ENST00000403136 BRD4O60885 1362 aaPredicted RBP18.04■□□□□ 0.48
CEACAM1-206ENST00000403136 NLRP13Q86W25 1043 aa18.04■□□□□ 0.48
CEACAM1-206ENST00000403136 ANKLE2Q86XL3 938 aa18.04■□□□□ 0.48
CEACAM1-206ENST00000403136 FAM135BQ49AJ0 1406 aa18.03■□□□□ 0.48
CEACAM1-206ENST00000403136 ATAD2Q6PL18 1390 aa18.01■□□□□ 0.47
CEACAM1-206ENST00000403136 PNISRQ8TF01 805 aaKnown RBP18.01■□□□□ 0.47
CEACAM1-206ENST00000403136 AMOTL2Q9Y2J4 779 aa18■□□□□ 0.47
CEACAM1-206ENST00000403136 NINLQ9Y2I6 1382 aa18■□□□□ 0.47
CEACAM1-206ENST00000403136 ROBO2Q9HCK4 1378 aa17.99■□□□□ 0.47
CEACAM1-206ENST00000403136 WASLO00401 505 aaPredicted RBP17.99■□□□□ 0.47
CEACAM1-206ENST00000403136 PTPRUQ92729 1446 aa17.98■□□□□ 0.47
CEACAM1-206ENST00000403136 ANKRD36BQ8N2N9 1353 aa17.98■□□□□ 0.47
CEACAM1-206ENST00000403136 HNRNPUQ00839 825 aaKnown RBP eCLIP17.97■□□□□ 0.47
CEACAM1-206ENST00000403136 PPP2R1AP30153 589 aa17.96■□□□□ 0.47
CEACAM1-206ENST00000403136 CPS1P31327 1500 aa17.96■□□□□ 0.47
CEACAM1-206ENST00000403136 KNDC1Q76NI1 1749 aa17.96■□□□□ 0.47
CEACAM1-206ENST00000403136 TERF2IPQ9NYB0 399 aa17.96■□□□□ 0.47
CEACAM1-206ENST00000403136 NSD3Q9BZ95 1437 aa17.96■□□□□ 0.47
CEACAM1-206ENST00000403136 ZNF142P52746 1687 aaPredicted RBP17.95■□□□□ 0.46
CEACAM1-206ENST00000403136 CABP1Q9NZU7 370 aa17.95■□□□□ 0.46
CEACAM1-206ENST00000403136 DIP2AQ14689 1571 aa17.94■□□□□ 0.46
CEACAM1-206ENST00000403136 PIK3R4Q99570 1358 aa17.94■□□□□ 0.46
CEACAM1-206ENST00000403136 CGNL1Q0VF96 1302 aa17.93■□□□□ 0.46
CEACAM1-206ENST00000403136 HDGFL2Q7Z4V5 671 aaPredicted RBP17.91■□□□□ 0.46
CEACAM1-206ENST00000403136 NUDT16Q96DE0 195 aaKnown RBP17.91■□□□□ 0.46
CEACAM1-206ENST00000403136 A0A1W2PP64 1363 aa17.91■□□□□ 0.46
CEACAM1-206ENST00000403136 MORC1Q86VD1 984 aa17.91■□□□□ 0.46
CEACAM1-206ENST00000403136 CCDC61Q9Y6R9 512 aa17.9■□□□□ 0.46
CEACAM1-206ENST00000403136 PTCH1Q13635 1447 aa17.89■□□□□ 0.45
CEACAM1-206ENST00000403136 CD163L1Q9NR16 1453 aa17.89■□□□□ 0.45
CEACAM1-206ENST00000403136 KCNA6P17658 529 aa17.89■□□□□ 0.45
CEACAM1-206ENST00000403136 NCKAP5LQ9HCH0 1330 aa17.87■□□□□ 0.45
CEACAM1-206ENST00000403136 NSD2O96028 1365 aa17.86■□□□□ 0.45
CEACAM1-206ENST00000403136 NPHP4O75161 1426 aaPredicted RBP17.86■□□□□ 0.45
CEACAM1-206ENST00000403136 KDM4FA0A1W2PPD8 638 aa17.86■□□□□ 0.45
CEACAM1-206ENST00000403136 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.86■□□□□ 0.45
CEACAM1-206ENST00000403136 USP32Q8NFA0 1604 aa17.85■□□□□ 0.45
CEACAM1-206ENST00000403136 PPIP5K1Q6PFW1 1433 aa17.85■□□□□ 0.45
CEACAM1-206ENST00000403136 PRR36Q9H6K5 1346 aa17.85■□□□□ 0.45
CEACAM1-206ENST00000403136 FYB1O15117 783 aa17.84■□□□□ 0.45
CEACAM1-206ENST00000403136 ZBED9Q6R2W3 1325 aa17.84■□□□□ 0.45
CEACAM1-206ENST00000403136 ATP7BP35670 1465 aa17.84■□□□□ 0.45
CEACAM1-206ENST00000403136 ADGRB2O60241 1585 aa17.83■□□□□ 0.44
CEACAM1-206ENST00000403136 GTF3C3Q9Y5Q9 886 aa17.83■□□□□ 0.44
CEACAM1-206ENST00000403136 SCAF1Q9H7N4 1312 aaKnown RBP17.83■□□□□ 0.44
CEACAM1-206ENST00000403136 CPSF1Q10570 1443 aaKnown RBP17.82■□□□□ 0.44
CEACAM1-206ENST00000403136 TNNT2P45379 298 aaPredicted RBP17.82■□□□□ 0.44
CEACAM1-206ENST00000403136 ZNF692Q9BU19 519 aaPredicted RBP17.82■□□□□ 0.44
CEACAM1-206ENST00000403136 XRN1Q8IZH2 1706 aaKnown RBP17.82■□□□□ 0.44
CEACAM1-206ENST00000403136 GGNBP2Q9H3C7 697 aa17.81■□□□□ 0.44
CEACAM1-206ENST00000403136 INSRP06213 1382 aa17.81■□□□□ 0.44
CEACAM1-206ENST00000403136 PLEKHG3A1L390 1219 aa17.81■□□□□ 0.44
CEACAM1-206ENST00000403136 NUTM2FA1L443 756 aa17.8■□□□□ 0.44
CEACAM1-206ENST00000403136 ADAMTS8Q9UP79 889 aa17.8■□□□□ 0.44
CEACAM1-206ENST00000403136 WDR43Q15061 677 aaKnown RBP eCLIP17.79■□□□□ 0.44
CEACAM1-206ENST00000403136 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.79■□□□□ 0.44
CEACAM1-206ENST00000403136 POLR3AO14802 1390 aaPredicted RBP17.78■□□□□ 0.44
CEACAM1-206ENST00000403136 CHD2O14647 1828 aaKnown RBP17.77■□□□□ 0.44
CEACAM1-206ENST00000403136 MTHFSP49914 203 aa17.77■□□□□ 0.44
CEACAM1-206ENST00000403136 EDC4Q6P2E9 1401 aaKnown RBP17.76■□□□□ 0.43
CEACAM1-206ENST00000403136 ACEP12821 1306 aa17.76■□□□□ 0.43
CEACAM1-206ENST00000403136 CDC42BPGQ6DT37 1551 aa17.75■□□□□ 0.43
CEACAM1-206ENST00000403136 HSPA2P54652 639 aa17.74■□□□□ 0.43
CEACAM1-206ENST00000403136 SENP3-EIF4A1A0A087X0R7 540 aa17.74■□□□□ 0.43
CEACAM1-206ENST00000403136 CFAP53Q96M91 514 aa17.74■□□□□ 0.43
CEACAM1-206ENST00000403136 RBM33Q96EV2 1170 aaKnown RBP17.73■□□□□ 0.43
CEACAM1-206ENST00000403136 BLMP54132 1417 aaPredicted RBP17.73■□□□□ 0.43
CEACAM1-206ENST00000403136 NME9Q86XW9 330 aa17.72■□□□□ 0.43
CEACAM1-206ENST00000403136 PMFBP1Q8TBY8 1022 aa17.71■□□□□ 0.43
CEACAM1-206ENST00000403136 ANKARQ7Z5J8 1434 aa17.71■□□□□ 0.43
CEACAM1-206ENST00000403136 TTC21BQ7Z4L5 1316 aa17.7■□□□□ 0.42
CEACAM1-206ENST00000403136 PROSER2Q86WR7 435 aaPredicted RBP17.7■□□□□ 0.42
CEACAM1-206ENST00000403136 NGDNQ8NEJ9 315 aaKnown RBP17.7■□□□□ 0.42
CEACAM1-206ENST00000403136 ZRANB1Q9UGI0 708 aa17.69■□□□□ 0.42
CEACAM1-206ENST00000403136 COG3Q96JB2 828 aa17.68■□□□□ 0.42
CEACAM1-206ENST00000403136 SALL2Q9Y467 1007 aaPredicted RBP17.68■□□□□ 0.42
CEACAM1-206ENST00000403136 TOPAZ1Q8N9V7 1692 aa17.68■□□□□ 0.42
CEACAM1-206ENST00000403136 C14orf37Q86TY3 774 aa17.68■□□□□ 0.42
CEACAM1-206ENST00000403136 NKTRP30414 1462 aaKnown RBP17.68■□□□□ 0.42
CEACAM1-206ENST00000403136 USP6P35125 1406 aa17.67■□□□□ 0.42
CEACAM1-206ENST00000403136 ADGRL3Q9HAR2 1447 aa17.67■□□□□ 0.42
CEACAM1-206ENST00000403136 AKAP12Q02952 1782 aa17.66■□□□□ 0.42
CEACAM1-206ENST00000403136 MON2Q7Z3U7 1717 aa17.66■□□□□ 0.42
CEACAM1-206ENST00000403136 POLKQ9UBT6 870 aa17.66■□□□□ 0.42
CEACAM1-206ENST00000403136 SSH2Q76I76 1423 aa17.65■□□□□ 0.42
CEACAM1-206ENST00000403136 NWD1Q149M9 1564 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms