RNA–Protein interactions for RNA: ENST00000396208.3

CCP110-202, Transcript of centriolar coiled-coil protein 110, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCP110, Length 5,151 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-202ENST00000396208 TMOD3Q9NYL9 352 aa9.31□□□□□ -0.92
CCP110-202ENST00000396208 GNL3LQ9NVN8 582 aaKnown RBP9.31□□□□□ -0.92
CCP110-202ENST00000396208 GNAI1P63096 354 aa9.31□□□□□ -0.92
CCP110-202ENST00000396208 GNL2Q13823 731 aaKnown RBP9.31□□□□□ -0.92
CCP110-202ENST00000396208 ZMYM3Q14202 1370 aa9.31□□□□□ -0.92
CCP110-202ENST00000396208 GOLGA6L22H0YM25 854 aa9.31□□□□□ -0.92
CCP110-202ENST00000396208 AMOTQ4VCS5 1084 aa9.31□□□□□ -0.92
CCP110-202ENST00000396208 RIC3Q7Z5B4 369 aa9.31□□□□□ -0.92
CCP110-202ENST00000396208 TEX13AQ9BXU3 409 aaPredicted RBP9.31□□□□□ -0.92
CCP110-202ENST00000396208 TCEAL9Q9UHQ7 104 aa9.31□□□□□ -0.92
CCP110-202ENST00000396208 USP47Q96K76 1375 aa9.31□□□□□ -0.92
CCP110-202ENST00000396208 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.31□□□□□ -0.92
CCP110-202ENST00000396208 TULP1O00294 542 aaPredicted RBP9.3□□□□□ -0.92
CCP110-202ENST00000396208 EIF2S2P20042 333 aaKnown RBP9.3□□□□□ -0.92
CCP110-202ENST00000396208 ZC3H6P61129 1189 aaKnown RBP9.3□□□□□ -0.92
CCP110-202ENST00000396208 IDI1Q13907 227 aa9.3□□□□□ -0.92
CCP110-202ENST00000396208 STK32BQ9NY57 414 aa9.3□□□□□ -0.92
CCP110-202ENST00000396208 CAMSAP2Q08AD1 1489 aa9.3□□□□□ -0.92
CCP110-202ENST00000396208 CLSTN1O94985 981 aa9.3□□□□□ -0.92
CCP110-202ENST00000396208 FBXO31Q5XUX0 539 aaPredicted RBP9.3□□□□□ -0.92
CCP110-202ENST00000396208 KDM5BQ9UGL1 1544 aa9.3□□□□□ -0.92
CCP110-202ENST00000396208 FOXO3O43524 673 aa9.3□□□□□ -0.92
CCP110-202ENST00000396208 KCNA6P17658 529 aa9.3□□□□□ -0.92
CCP110-202ENST00000396208 HSP90AB4PQ58FF6 505 aa9.3□□□□□ -0.92
CCP110-202ENST00000396208 NCKAP5LQ9HCH0 1330 aa9.3□□□□□ -0.92
CCP110-202ENST00000396208 TSPYL4Q9UJ04 414 aa9.3□□□□□ -0.92
CCP110-202ENST00000396208 ZNF530Q6P9A1 599 aaPredicted RBP9.3□□□□□ -0.92
CCP110-202ENST00000396208 ATP10BO94823 1461 aa9.29□□□□□ -0.92
CCP110-202ENST00000396208 RPRD2Q5VT52 1461 aaKnown RBP9.29□□□□□ -0.92
CCP110-202ENST00000396208 TMOD2Q9NZR1 351 aa9.29□□□□□ -0.92
CCP110-202ENST00000396208 MTHFSP49914 203 aa9.29□□□□□ -0.92
CCP110-202ENST00000396208 TBX22Q9Y458 520 aa9.29□□□□□ -0.92
CCP110-202ENST00000396208 THOC2Q8NI27 1593 aaKnown RBP9.28□□□□□ -0.92
CCP110-202ENST00000396208 CEP170Q5SW79 1584 aa9.28□□□□□ -0.92
CCP110-202ENST00000396208 API5Q9BZZ5 524 aaKnown RBP9.28□□□□□ -0.92
CCP110-202ENST00000396208 CABP1Q9NZU7 370 aa9.27□□□□□ -0.92
CCP110-202ENST00000396208 MAGI2Q86UL8 1455 aa9.27□□□□□ -0.93
CCP110-202ENST00000396208 ARAP1Q96P48 1450 aa9.27□□□□□ -0.93
CCP110-202ENST00000396208 XPCQ01831 940 aaPredicted RBP9.27□□□□□ -0.93
CCP110-202ENST00000396208 HSP90AB3PQ58FF7 597 aa9.27□□□□□ -0.93
CCP110-202ENST00000396208 RWDD1Q9H446 243 aaPredicted RBP9.27□□□□□ -0.93
CCP110-202ENST00000396208 TOMM22Q9NS69 142 aa9.27□□□□□ -0.93
CCP110-202ENST00000396208 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.26□□□□□ -0.93
CCP110-202ENST00000396208 KIF3AQ9Y496 699 aa9.26□□□□□ -0.93
CCP110-202ENST00000396208 ZFYVE16Q7Z3T8 1539 aa9.26□□□□□ -0.93
CCP110-202ENST00000396208 MYBBP1AQ9BQG0 1328 aaKnown RBP9.26□□□□□ -0.93
CCP110-202ENST00000396208 MARCH6O60337 910 aa9.26□□□□□ -0.93
CCP110-202ENST00000396208 ITPRIPQ8IWB1 547 aa9.26□□□□□ -0.93
CCP110-202ENST00000396208 DUOX2Q9NRD8 1548 aa9.26□□□□□ -0.93
CCP110-202ENST00000396208 PAXIP1Q6ZW49 1069 aaPredicted RBP9.26□□□□□ -0.93
CCP110-202ENST00000396208 CCER2I3L3R5 266 aa9.26□□□□□ -0.93
CCP110-202ENST00000396208 WASLO00401 505 aaPredicted RBP9.26□□□□□ -0.93
CCP110-202ENST00000396208 KRI1Q8N9T8 703 aaKnown RBP9.26□□□□□ -0.93
CCP110-202ENST00000396208 GGNBP2Q9H3C7 697 aa9.26□□□□□ -0.93
CCP110-202ENST00000396208 RIMS2Q9UQ26 1411 aa9.25□□□□□ -0.93
CCP110-202ENST00000396208 G3BP1Q13283 466 aaKnown RBP eCLIP9.25□□□□□ -0.93
CCP110-202ENST00000396208 DDB1Q16531 1140 aa9.25□□□□□ -0.93
CCP110-202ENST00000396208 CCDC30Q5VVM6 783 aa9.25□□□□□ -0.93
CCP110-202ENST00000396208 SYNE3Q6ZMZ3 975 aa9.25□□□□□ -0.93
CCP110-202ENST00000396208 KIAA0556O60303 1618 aa9.25□□□□□ -0.93
CCP110-202ENST00000396208 HTATSF1O43719 755 aaKnown RBP9.25□□□□□ -0.93
CCP110-202ENST00000396208 TIAM1Q13009 1591 aa9.25□□□□□ -0.93
CCP110-202ENST00000396208 NINLQ9Y2I6 1382 aa9.24□□□□□ -0.93
CCP110-202ENST00000396208 TTC21AQ8NDW8 1320 aa9.24□□□□□ -0.93
CCP110-202ENST00000396208 RIPK4P57078 832 aa9.23□□□□□ -0.93
CCP110-202ENST00000396208 ITSN2Q9NZM3 1697 aa9.23□□□□□ -0.93
CCP110-202ENST00000396208 RRP7AQ9Y3A4 280 aaKnown RBP9.23□□□□□ -0.93
CCP110-202ENST00000396208 AKAP17AQ02040 695 aaKnown RBP9.23□□□□□ -0.93
CCP110-202ENST00000396208 FKBP5Q13451 457 aaPredicted RBP9.23□□□□□ -0.93
CCP110-202ENST00000396208 VPS53Q5VIR6 699 aa9.23□□□□□ -0.93
CCP110-202ENST00000396208 TRAPPC8Q9Y2L5 1435 aa9.23□□□□□ -0.93
CCP110-202ENST00000396208 SLC3A2P08195 630 aaKnown RBP9.23□□□□□ -0.93
CCP110-202ENST00000396208 ARHGEF10O15013 1369 aa9.23□□□□□ -0.93
CCP110-202ENST00000396208 RXRBP28702 533 aa9.22□□□□□ -0.93
CCP110-202ENST00000396208 RUNDC1Q96C34 613 aa9.22□□□□□ -0.93
CCP110-202ENST00000396208 TRPC5Q9UL62 973 aaPredicted RBP9.22□□□□□ -0.93
CCP110-202ENST00000396208 MAP3K1Q13233 1512 aa9.22□□□□□ -0.93
CCP110-202ENST00000396208 RFC4P35249 363 aa9.22□□□□□ -0.93
CCP110-202ENST00000396208 ST5P78524 1137 aa9.22□□□□□ -0.93
CCP110-202ENST00000396208 CPLX2Q6PUV4 134 aaKnown RBP9.22□□□□□ -0.93
CCP110-202ENST00000396208 ZRANB1Q9UGI0 708 aa9.22□□□□□ -0.93
CCP110-202ENST00000396208 NCOA1Q15788 1441 aa9.22□□□□□ -0.93
CCP110-202ENST00000396208 TBC1D2BQ9UPU7 963 aa9.22□□□□□ -0.93
CCP110-202ENST00000396208 RPGRQ92834 1020 aaKnown RBP9.21□□□□□ -0.93
CCP110-202ENST00000396208 BEGAINQ9BUH8 593 aa9.21□□□□□ -0.93
CCP110-202ENST00000396208 E9PSI1 815 aa9.21□□□□□ -0.93
CCP110-202ENST00000396208 GOLGA6L4A6NEF3 574 aa9.21□□□□□ -0.94
CCP110-202ENST00000396208 FLAD1Q8NFF5 587 aa9.21□□□□□ -0.94
CCP110-202ENST00000396208 MPHOSPH8Q99549 860 aa9.21□□□□□ -0.94
CCP110-202ENST00000396208 USP21Q9UK80 565 aa9.21□□□□□ -0.94
CCP110-202ENST00000396208 NCBP3Q53F19 620 aaKnown RBP9.2□□□□□ -0.94
CCP110-202ENST00000396208 KDM6BO15054 1643 aa9.2□□□□□ -0.94
CCP110-202ENST00000396208 CCDC7Q96M83 1385 aa9.2□□□□□ -0.94
CCP110-202ENST00000396208 SLAIN2Q9P270 581 aa9.2□□□□□ -0.94
CCP110-202ENST00000396208 FKBP8Q14318 412 aa9.2□□□□□ -0.94
CCP110-202ENST00000396208 IFNL2Q8IZJ0 200 aa9.2□□□□□ -0.94
CCP110-202ENST00000396208 RUFY2Q8WXA3 655 aa9.2□□□□□ -0.94
CCP110-202ENST00000396208 YEATS2Q9ULM3 1422 aa9.2□□□□□ -0.94
CCP110-202ENST00000396208 IGHMBP2P38935 993 aaKnown RBP9.2□□□□□ -0.94
CCP110-202ENST00000396208 PBRM1Q86U86 1689 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms