RNA–Protein interactions for RNA: ENST00000396020.7

RPS29-202, Transcript of ribosomal protein S29, humanhuman

TSL 1 (best) BASIC

Gene RPS29, Length 7,062 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS29-202ENST00000396020 TEX35Q5T0J7 233 aa8.84□□□□□ -0.99
RPS29-202ENST00000396020 AIMP1Q12904 312 aaKnown RBP8.84□□□□□ -0.99
RPS29-202ENST00000396020 RUFY1Q96T51 708 aa8.84□□□□□ -0.99
RPS29-202ENST00000396020 NUTM2GQ5VZR2 741 aa8.84□□□□□ -0.99
RPS29-202ENST00000396020 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.84□□□□□ -0.99
RPS29-202ENST00000396020 HOOK1Q9UJC3 728 aaKnown RBP8.84□□□□□ -0.99
RPS29-202ENST00000396020 AK7Q96M32 723 aa8.83□□□□□ -1
RPS29-202ENST00000396020 PHF23Q9BUL5 403 aaPredicted RBP8.83□□□□□ -1
RPS29-202ENST00000396020 ARAP1Q96P48 1450 aa8.83□□□□□ -1
RPS29-202ENST00000396020 CCDC43Q96MW1 224 aaKnown RBP8.83□□□□□ -1
RPS29-202ENST00000396020 NLRP13Q86W25 1043 aa8.83□□□□□ -1
RPS29-202ENST00000396020 HMOX1P09601 288 aa8.83□□□□□ -1
RPS29-202ENST00000396020 SKOR2Q2VWA4 1001 aaPredicted RBP8.83□□□□□ -1
RPS29-202ENST00000396020 RRP12Q5JTH9 1297 aaKnown RBP8.83□□□□□ -1
RPS29-202ENST00000396020 CALRP27797 417 aaKnown RBP8.82□□□□□ -1
RPS29-202ENST00000396020 PSME1Q06323 249 aa8.82□□□□□ -1
RPS29-202ENST00000396020 ODF2Q5BJF6 829 aa8.82□□□□□ -1
RPS29-202ENST00000396020 ZFYVE27Q5T4F4 411 aa8.82□□□□□ -1
RPS29-202ENST00000396020 CAGE1Q8TC20 777 aa8.82□□□□□ -1
RPS29-202ENST00000396020 ZNF644Q9H582 1327 aaPredicted RBP8.82□□□□□ -1
RPS29-202ENST00000396020 VPS37CA5D8V6 355 aaPredicted RBP8.82□□□□□ -1
RPS29-202ENST00000396020 KIF14Q15058 1648 aa8.82□□□□□ -1
RPS29-202ENST00000396020 CCDC47Q96A33 483 aaKnown RBP8.82□□□□□ -1
RPS29-202ENST00000396020 IFT57Q9NWB7 429 aa8.82□□□□□ -1
RPS29-202ENST00000396020 MAP4K4O95819 1239 aaPredicted RBP8.82□□□□□ -1
RPS29-202ENST00000396020 TMEM132AQ24JP5 1023 aa8.82□□□□□ -1
RPS29-202ENST00000396020 ZKSCAN2Q63HK3 967 aa8.82□□□□□ -1
RPS29-202ENST00000396020 MAP7D2Q96T17 732 aa8.81□□□□□ -1
RPS29-202ENST00000396020 HDAC5Q9UQL6 1122 aa8.81□□□□□ -1
RPS29-202ENST00000396020 TIAM1Q13009 1591 aa8.81□□□□□ -1
RPS29-202ENST00000396020 IQGAP2Q13576 1575 aa8.81□□□□□ -1
RPS29-202ENST00000396020 RIPK4P57078 832 aa8.81□□□□□ -1
RPS29-202ENST00000396020 CT47A1Q5JQC4 288 aaPredicted RBP8.81□□□□□ -1
RPS29-202ENST00000396020 PCF11O94913 1555 aaKnown RBP8.81□□□□□ -1
RPS29-202ENST00000396020 FAM177BA6PVY3 158 aa8.81□□□□□ -1
RPS29-202ENST00000396020 RUFY2Q8WXA3 655 aa8.81□□□□□ -1
RPS29-202ENST00000396020 RRBP1Q9P2E9 1410 aaKnown RBP8.81□□□□□ -1
RPS29-202ENST00000396020 ANKRD20A12PQ8NF67 263 aa8.81□□□□□ -1
RPS29-202ENST00000396020 RBM33Q96EV2 1170 aaKnown RBP8.81□□□□□ -1
RPS29-202ENST00000396020 POLA1P09884 1462 aaPredicted RBP8.8□□□□□ -1
RPS29-202ENST00000396020 CTTNBP2Q8WZ74 1663 aa8.8□□□□□ -1
RPS29-202ENST00000396020 CPLX1O14810 134 aa8.8□□□□□ -1
RPS29-202ENST00000396020 NEXNQ0ZGT2 675 aa8.8□□□□□ -1
RPS29-202ENST00000396020 SMC3Q9UQE7 1217 aa8.8□□□□□ -1
RPS29-202ENST00000396020 RIC3Q7Z5B4 369 aa8.8□□□□□ -1
RPS29-202ENST00000396020 ATP6V1DQ9Y5K8 247 aa8.8□□□□□ -1
RPS29-202ENST00000396020 E9PSI1 815 aa8.8□□□□□ -1
RPS29-202ENST00000396020 TRDNQ13061 729 aa8.8□□□□□ -1
RPS29-202ENST00000396020 OLFM4Q6UX06 510 aa8.8□□□□□ -1
RPS29-202ENST00000396020 TEFQ10587 303 aa8.79□□□□□ -1
RPS29-202ENST00000396020 BICRAQ9NZM4 1560 aa8.79□□□□□ -1
RPS29-202ENST00000396020 IKQ13123 557 aaPredicted RBP8.79□□□□□ -1
RPS29-202ENST00000396020 NEUROD6Q96NK8 337 aa8.79□□□□□ -1
RPS29-202ENST00000396020 TSPYL4Q9UJ04 414 aa8.79□□□□□ -1
RPS29-202ENST00000396020 G3BP1Q13283 466 aaKnown RBP eCLIP8.79□□□□□ -1
RPS29-202ENST00000396020 NINLQ9Y2I6 1382 aa8.79□□□□□ -1
RPS29-202ENST00000396020 WASHC4Q2M389 1173 aa8.79□□□□□ -1
RPS29-202ENST00000396020 MIA2Q96PC5 1412 aa8.78□□□□□ -1
RPS29-202ENST00000396020 BRPF1P55201 1214 aaPredicted RBP8.78□□□□□ -1
RPS29-202ENST00000396020 PDE3BQ13370 1112 aa8.78□□□□□ -1
RPS29-202ENST00000396020 LRRFIP1Q32MZ4 808 aaKnown RBP8.78□□□□□ -1
RPS29-202ENST00000396020 ROCK1Q13464 1354 aa8.78□□□□□ -1
RPS29-202ENST00000396020 PTPN23Q9H3S7 1636 aa8.78□□□□□ -1
RPS29-202ENST00000396020 CEBPZQ03701 1054 aaKnown RBP8.78□□□□□ -1
RPS29-202ENST00000396020 INTS3Q68E01 1043 aaKnown RBP8.78□□□□□ -1
RPS29-202ENST00000396020 ANKRD50Q9ULJ7 1429 aa8.78□□□□□ -1
RPS29-202ENST00000396020 SMC2O95347 1197 aa8.78□□□□□ -1
RPS29-202ENST00000396020 PLCD4Q9BRC7 762 aa8.78□□□□□ -1
RPS29-202ENST00000396020 R3HCC1Q9Y3T6 440 aaKnown RBP8.78□□□□□ -1
RPS29-202ENST00000396020 SPC24Q8NBT2 197 aa8.77□□□□□ -1
RPS29-202ENST00000396020 DNAJC2Q99543 621 aaKnown RBP8.77□□□□□ -1
RPS29-202ENST00000396020 PLEKHH2Q8IVE3 1493 aa8.77□□□□□ -1
RPS29-202ENST00000396020 ATF3P18847 181 aa8.77□□□□□ -1.01
RPS29-202ENST00000396020 BIVM-ERCC5R4GMW8 1640 aa8.77□□□□□ -1.01
RPS29-202ENST00000396020 IPO7O95373 1038 aaKnown RBP8.77□□□□□ -1.01
RPS29-202ENST00000396020 FKBP5Q13451 457 aaPredicted RBP8.77□□□□□ -1.01
RPS29-202ENST00000396020 C9orf84Q5VXU9 1444 aa8.77□□□□□ -1.01
RPS29-202ENST00000396020 ZKSCAN1P17029 563 aaPredicted RBP8.76□□□□□ -1.01
RPS29-202ENST00000396020 C1orf115Q9H7X2 142 aa8.76□□□□□ -1.01
RPS29-202ENST00000396020 CDK13Q14004 1512 aaKnown RBP8.76□□□□□ -1.01
RPS29-202ENST00000396020 APAF1O14727 1248 aa8.76□□□□□ -1.01
RPS29-202ENST00000396020 DIAPH1O60610 1272 aaKnown RBP8.76□□□□□ -1.01
RPS29-202ENST00000396020 PANK1Q8TE04 598 aa8.76□□□□□ -1.01
RPS29-202ENST00000396020 LNPKQ9C0E8 428 aa8.76□□□□□ -1.01
RPS29-202ENST00000396020 BRMS1Q9HCU9 246 aa8.76□□□□□ -1.01
RPS29-202ENST00000396020 DDX58O95786 925 aaKnown RBP8.76□□□□□ -1.01
RPS29-202ENST00000396020 TTC39AQ5SRH9 613 aa8.76□□□□□ -1.01
RPS29-202ENST00000396020 RNF20Q5VTR2 975 aa8.76□□□□□ -1.01
RPS29-202ENST00000396020 MNS1Q8NEH6 495 aa8.76□□□□□ -1.01
RPS29-202ENST00000396020 NOM1Q5C9Z4 860 aaKnown RBP8.75□□□□□ -1.01
RPS29-202ENST00000396020 RBM10P98175 930 aaKnown RBP8.75□□□□□ -1.01
RPS29-202ENST00000396020 KIF6Q6ZMV9 814 aa8.75□□□□□ -1.01
RPS29-202ENST00000396020 PPP1R1BQ9UD71 204 aaPredicted RBP8.75□□□□□ -1.01
RPS29-202ENST00000396020 REC8O95072 547 aa8.75□□□□□ -1.01
RPS29-202ENST00000396020 STK3Q13188 491 aa8.75□□□□□ -1.01
RPS29-202ENST00000396020 CNTROBQ8N137 903 aa8.75□□□□□ -1.01
RPS29-202ENST00000396020 CABP2Q9NPB3 220 aa8.75□□□□□ -1.01
RPS29-202ENST00000396020 DDX19BQ9UMR2 479 aa8.75□□□□□ -1.01
RPS29-202ENST00000396020 DZIP1LQ8IYY4 767 aaKnown RBP8.74□□□□□ -1.01
RPS29-202ENST00000396020 SPINK5Q9NQ38 1064 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms