RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 ERBB3P21860 1342 aa9.15□□□□□ -0.94
HMGB1P10-201ENST00000395823 RETREG2Q8NC44 543 aa9.15□□□□□ -0.94
HMGB1P10-201ENST00000395823 EPS8L1Q8TE68 723 aa9.15□□□□□ -0.94
HMGB1P10-201ENST00000395823 SYMPKQ92797 1274 aaKnown RBP9.15□□□□□ -0.94
HMGB1P10-201ENST00000395823 SLF2Q8IX21 1173 aa9.14□□□□□ -0.95
HMGB1P10-201ENST00000395823 HELBQ8NG08 1087 aaPredicted RBP9.14□□□□□ -0.95
HMGB1P10-201ENST00000395823 BHMG1C9JSJ3 638 aaPredicted RBP9.12□□□□□ -0.95
HMGB1P10-201ENST00000395823 C6orf229H3BNL8 230 aa9.12□□□□□ -0.95
HMGB1P10-201ENST00000395823 PBX2P40425 430 aa9.12□□□□□ -0.95
HMGB1P10-201ENST00000395823 LAPTM4BQ86VI4 370 aa9.12□□□□□ -0.95
HMGB1P10-201ENST00000395823 TSC1Q92574 1164 aa9.12□□□□□ -0.95
HMGB1P10-201ENST00000395823 ATP6V1AP38606 617 aa9.11□□□□□ -0.95
HMGB1P10-201ENST00000395823 HDGFL1Q5TGJ6 251 aa9.11□□□□□ -0.95
HMGB1P10-201ENST00000395823 PER1O15534 1290 aaPredicted RBP9.1□□□□□ -0.95
HMGB1P10-201ENST00000395823 ST18O60284 1047 aa9.1□□□□□ -0.95
HMGB1P10-201ENST00000395823 HDGFP51858 240 aaKnown RBP9.1□□□□□ -0.95
HMGB1P10-201ENST00000395823 VAC14Q08AM6 782 aa9.1□□□□□ -0.95
HMGB1P10-201ENST00000395823 PRR7Q8TB68 274 aa9.1□□□□□ -0.95
HMGB1P10-201ENST00000395823 ZBTB7CA1YPR0 619 aa9.09□□□□□ -0.95
HMGB1P10-201ENST00000395823 PPP1R15AO75807 674 aaPredicted RBP9.09□□□□□ -0.95
HMGB1P10-201ENST00000395823 WASHC4Q2M389 1173 aa9.09□□□□□ -0.95
HMGB1P10-201ENST00000395823 GRIPAP1Q4V328 841 aa9.09□□□□□ -0.95
HMGB1P10-201ENST00000395823 MORN1Q5T089 497 aa9.09□□□□□ -0.95
HMGB1P10-201ENST00000395823 ZNF687Q8N1G0 1237 aa9.09□□□□□ -0.95
HMGB1P10-201ENST00000395823 MARVELD3Q96A59 401 aa9.09□□□□□ -0.95
HMGB1P10-201ENST00000395823 ZFRQ96KR1 1074 aaKnown RBP9.09□□□□□ -0.95
HMGB1P10-201ENST00000395823 RNF40O75150 1001 aa9.08□□□□□ -0.96
HMGB1P10-201ENST00000395823 SLC4A3P48751 1232 aa9.08□□□□□ -0.96
HMGB1P10-201ENST00000395823 CFAP70Q5T0N1 1121 aa9.08□□□□□ -0.96
HMGB1P10-201ENST00000395823 ALG2Q9H553 416 aa9.08□□□□□ -0.96
HMGB1P10-201ENST00000395823 POTEB3A0JP26 581 aa9.07□□□□□ -0.96
HMGB1P10-201ENST00000395823 EMP3P54852 163 aa9.07□□□□□ -0.96
HMGB1P10-201ENST00000395823 SRPK2P78362 688 aaKnown RBP9.07□□□□□ -0.96
HMGB1P10-201ENST00000395823 NR6A1Q15406 480 aa9.07□□□□□ -0.96
HMGB1P10-201ENST00000395823 PUS10Q3MIT2 529 aaKnown RBP9.07□□□□□ -0.96
HMGB1P10-201ENST00000395823 POTEBQ6S5H4 581 aa9.07□□□□□ -0.96
HMGB1P10-201ENST00000395823 NBPF3Q9H094 633 aa9.07□□□□□ -0.96
HMGB1P10-201ENST00000395823 SLC27A5Q9Y2P5 690 aa9.07□□□□□ -0.96
HMGB1P10-201ENST00000395823 UCN2Q96RP3 112 aa9.06□□□□□ -0.96
HMGB1P10-201ENST00000395823 ACTN4O43707 911 aaKnown RBP9.05□□□□□ -0.96
HMGB1P10-201ENST00000395823 KMT5BQ4FZB7 885 aa9.05□□□□□ -0.96
HMGB1P10-201ENST00000395823 RETREG3Q86VR2 466 aa9.05□□□□□ -0.96
HMGB1P10-201ENST00000395823 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.04□□□□□ -0.96
HMGB1P10-201ENST00000395823 FAM205CA6NFA0 338 aa9.04□□□□□ -0.96
HMGB1P10-201ENST00000395823 TK2O00142 265 aa9.04□□□□□ -0.96
HMGB1P10-201ENST00000395823 PBXIP1Q96AQ6 731 aa9.04□□□□□ -0.96
HMGB1P10-201ENST00000395823 PPP1R12CQ9BZL4 782 aa9.04□□□□□ -0.96
HMGB1P10-201ENST00000395823 RNF19BQ6ZMZ0 732 aa9.03□□□□□ -0.96
HMGB1P10-201ENST00000395823 KCTD17Q8N5Z5 321 aa9.03□□□□□ -0.96
HMGB1P10-201ENST00000395823 DESI1Q6ICB0 168 aa9.02□□□□□ -0.97
HMGB1P10-201ENST00000395823 BLOC1S3Q6QNY0 202 aa9.02□□□□□ -0.97
HMGB1P10-201ENST00000395823 PALM3A6NDB9 673 aaPredicted RBP9.01□□□□□ -0.97
HMGB1P10-201ENST00000395823 RFX1P22670 979 aa9.01□□□□□ -0.97
HMGB1P10-201ENST00000395823 LYPD8Q6UX82 237 aa9.01□□□□□ -0.97
HMGB1P10-201ENST00000395823 MRPL50Q8N5N7 158 aaKnown RBP9.01□□□□□ -0.97
HMGB1P10-201ENST00000395823 LRCH3Q96II8 777 aa9.01□□□□□ -0.97
HMGB1P10-201ENST00000395823 HRO43593 1189 aa9□□□□□ -0.97
HMGB1P10-201ENST00000395823 Q3C1V9 767 aa9□□□□□ -0.97
HMGB1P10-201ENST00000395823 ADGRD1Q6QNK2 874 aa9□□□□□ -0.97
HMGB1P10-201ENST00000395823 AEBP1Q8IUX7 1158 aa9□□□□□ -0.97
HMGB1P10-201ENST00000395823 CDKN2AIPQ9NXV6 580 aaPredicted RBP9□□□□□ -0.97
HMGB1P10-201ENST00000395823 LSM11P83369 360 aaKnown RBP eCLIP8.99□□□□□ -0.97
HMGB1P10-201ENST00000395823 HS3ST6Q96QI5 342 aa8.99□□□□□ -0.97
HMGB1P10-201ENST00000395823 SOX11P35716 441 aa8.98□□□□□ -0.97
HMGB1P10-201ENST00000395823 APLP1P51693 650 aa8.98□□□□□ -0.97
HMGB1P10-201ENST00000395823 LHX8Q68G74 356 aa8.98□□□□□ -0.97
HMGB1P10-201ENST00000395823 BRICD5Q6PL45 260 aa8.98□□□□□ -0.97
HMGB1P10-201ENST00000395823 THAP11Q96EK4 314 aa8.98□□□□□ -0.97
HMGB1P10-201ENST00000395823 TFIP11Q9UBB9 837 aaKnown RBP8.98□□□□□ -0.97
HMGB1P10-201ENST00000395823 USB1Q9BQ65 265 aaKnown RBP8.97□□□□□ -0.97
HMGB1P10-201ENST00000395823 CCDC9Q9Y3X0 531 aaKnown RBP8.97□□□□□ -0.97
HMGB1P10-201ENST00000395823 MAFBQ9Y5Q3 323 aaPredicted RBP8.97□□□□□ -0.97
HMGB1P10-201ENST00000395823 ACIN1Q9UKV3 1341 aaKnown RBP8.97□□□□□ -0.97
HMGB1P10-201ENST00000395823 F12P00748 615 aaPredicted RBP8.96□□□□□ -0.98
HMGB1P10-201ENST00000395823 FBXO45P0C2W1 286 aa8.96□□□□□ -0.98
HMGB1P10-201ENST00000395823 LMOD1P29536 600 aaPredicted RBP8.96□□□□□ -0.98
HMGB1P10-201ENST00000395823 SALL2Q9Y467 1007 aaPredicted RBP8.96□□□□□ -0.98
HMGB1P10-201ENST00000395823 CARNS1A5YM72 827 aa8.95□□□□□ -0.98
HMGB1P10-201ENST00000395823 BCAMP50895 628 aa8.95□□□□□ -0.98
HMGB1P10-201ENST00000395823 TBC1D9Q6ZT07 1266 aa8.95□□□□□ -0.98
HMGB1P10-201ENST00000395823 PRR14Q9BWN1 585 aa8.95□□□□□ -0.98
HMGB1P10-201ENST00000395823 USTQ9Y2C2 406 aa8.95□□□□□ -0.98
HMGB1P10-201ENST00000395823 SOWAHBA6NEL2 793 aa8.94□□□□□ -0.98
HMGB1P10-201ENST00000395823 NR1H3Q13133 447 aa8.94□□□□□ -0.98
HMGB1P10-201ENST00000395823 SEMA3FQ13275 785 aa8.94□□□□□ -0.98
HMGB1P10-201ENST00000395823 LCE2DQ5TA82 110 aaPredicted RBP8.94□□□□□ -0.98
HMGB1P10-201ENST00000395823 SCUBE3Q8IX30 993 aa8.94□□□□□ -0.98
HMGB1P10-201ENST00000395823 MAP10Q9P2G4 905 aa8.94□□□□□ -0.98
HMGB1P10-201ENST00000395823 HPS5Q9UPZ3 1129 aa8.94□□□□□ -0.98
HMGB1P10-201ENST00000395823 ANKK1Q8NFD2 765 aa8.93□□□□□ -0.98
HMGB1P10-201ENST00000395823 FKBPLQ9UIM3 349 aa8.93□□□□□ -0.98
HMGB1P10-201ENST00000395823 PIK3CDO00329 1044 aa8.92□□□□□ -0.98
HMGB1P10-201ENST00000395823 JUNDP17535 347 aa8.92□□□□□ -0.98
HMGB1P10-201ENST00000395823 NPM2Q86SE8 214 aaKnown RBP8.92□□□□□ -0.98
HMGB1P10-201ENST00000395823 ATG7O95352 703 aa8.91□□□□□ -0.98
HMGB1P10-201ENST00000395823 PPP4CP60510 307 aa8.91□□□□□ -0.98
HMGB1P10-201ENST00000395823 EIF4G2P78344 907 aaKnown RBP eCLIP8.91□□□□□ -0.98
HMGB1P10-201ENST00000395823 PTPRNQ16849 979 aa8.91□□□□□ -0.98
HMGB1P10-201ENST00000395823 CDCA8Q53HL2 280 aa8.91□□□□□ -0.98
HMGB1P10-201ENST00000395823 PCDHB3Q9Y5E6 796 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms