RNA–Protein interactions for RNA: ENST00000390442.3

TRAV12-3-201, Transcript of T cell receptor alpha variable 12-3, humanhuman

APPRIS P1 BASIC

Gene TRAV12-3, Length 399 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3-201ENST00000390442 SPDYE2BA6NHP3 402 aa10.49□□□□□ -0.73
TRAV12-3-201ENST00000390442 SPDYE6P0CI01 402 aa10.49□□□□□ -0.73
TRAV12-3-201ENST00000390442 SPDYE2Q495Y8 402 aa10.49□□□□□ -0.73
TRAV12-3-201ENST00000390442 TRIM52Q96A61 297 aa10.49□□□□□ -0.73
TRAV12-3-201ENST00000390442 JCADQ9P266 1359 aa10.49□□□□□ -0.73
TRAV12-3-201ENST00000390442 RIMS2Q9UQ26 1411 aa10.49□□□□□ -0.73
TRAV12-3-201ENST00000390442 NRXN3Q9Y4C0 1643 aa10.48□□□□□ -0.73
TRAV12-3-201ENST00000390442 SSUH2Q9Y2M2 353 aa10.48□□□□□ -0.73
TRAV12-3-201ENST00000390442 ADAMTS13Q76LX8 1427 aa10.48□□□□□ -0.73
TRAV12-3-201ENST00000390442 NEXMIFQ5QGS0 1516 aa10.48□□□□□ -0.73
TRAV12-3-201ENST00000390442 KIF1BO60333 1816 aa10.47□□□□□ -0.73
TRAV12-3-201ENST00000390442 HS6ST3Q8IZP7 471 aa10.47□□□□□ -0.73
TRAV12-3-201ENST00000390442 SPATA31E1Q6ZUB1 1445 aa10.47□□□□□ -0.73
TRAV12-3-201ENST00000390442 SLAIN2Q9P270 581 aa10.46□□□□□ -0.73
TRAV12-3-201ENST00000390442 PLEKHG1Q9ULL1 1385 aa10.46□□□□□ -0.74
TRAV12-3-201ENST00000390442 COL16A1Q07092 1604 aaPredicted RBP10.46□□□□□ -0.74
TRAV12-3-201ENST00000390442 MEX3CQ5U5Q3 659 aaKnown RBP10.45□□□□□ -0.74
TRAV12-3-201ENST00000390442 CHD2O14647 1828 aaKnown RBP10.44□□□□□ -0.74
TRAV12-3-201ENST00000390442 ANKRD30BQ9BXX2 1392 aa10.44□□□□□ -0.74
TRAV12-3-201ENST00000390442 ACIN1Q9UKV3 1341 aaKnown RBP10.44□□□□□ -0.74
TRAV12-3-201ENST00000390442 HOMEZQ8IX15 550 aa10.44□□□□□ -0.74
TRAV12-3-201ENST00000390442 PPLO60437 1756 aa10.44□□□□□ -0.74
TRAV12-3-201ENST00000390442 LRP6O75581 1613 aa10.44□□□□□ -0.74
TRAV12-3-201ENST00000390442 SETBP1Q9Y6X0 1596 aa10.43□□□□□ -0.74
TRAV12-3-201ENST00000390442 PPP1R15AO75807 674 aaPredicted RBP10.43□□□□□ -0.74
TRAV12-3-201ENST00000390442 NUTM2DQ5VT03 806 aaPredicted RBP10.43□□□□□ -0.74
TRAV12-3-201ENST00000390442 C14orf37Q86TY3 774 aa10.43□□□□□ -0.74
TRAV12-3-201ENST00000390442 CIZ1Q9ULV3 898 aaPredicted RBP10.43□□□□□ -0.74
TRAV12-3-201ENST00000390442 IFT172Q9UG01 1749 aa10.43□□□□□ -0.74
TRAV12-3-201ENST00000390442 SPATA31A6Q5VVP1 1343 aa10.42□□□□□ -0.74
TRAV12-3-201ENST00000390442 ZNF772Q68DY9 489 aaPredicted RBP10.42□□□□□ -0.74
TRAV12-3-201ENST00000390442 UPF1Q92900 1129 aaKnown RBP eCLIP10.42□□□□□ -0.74
TRAV12-3-201ENST00000390442 PTPRUQ92729 1446 aa10.41□□□□□ -0.74
TRAV12-3-201ENST00000390442 SHPRHQ149N8 1683 aa10.41□□□□□ -0.74
TRAV12-3-201ENST00000390442 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.41□□□□□ -0.74
TRAV12-3-201ENST00000390442 TBX22Q9Y458 520 aa10.41□□□□□ -0.74
TRAV12-3-201ENST00000390442 AHDC1Q5TGY3 1603 aaPredicted RBP10.4□□□□□ -0.74
TRAV12-3-201ENST00000390442 ZBTB47Q9UFB7 747 aaPredicted RBP10.4□□□□□ -0.74
TRAV12-3-201ENST00000390442 CCDC144AA2RUR9 1427 aa10.4□□□□□ -0.75
TRAV12-3-201ENST00000390442 DIP2AQ14689 1571 aa10.39□□□□□ -0.75
TRAV12-3-201ENST00000390442 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.39□□□□□ -0.75
TRAV12-3-201ENST00000390442 HDGFP51858 240 aaKnown RBP10.39□□□□□ -0.75
TRAV12-3-201ENST00000390442 XRN1Q8IZH2 1706 aaKnown RBP10.38□□□□□ -0.75
TRAV12-3-201ENST00000390442 RPGRIP1LQ68CZ1 1315 aa10.38□□□□□ -0.75
TRAV12-3-201ENST00000390442 NRXN1Q9ULB1 1477 aa10.38□□□□□ -0.75
TRAV12-3-201ENST00000390442 ATF3P18847 181 aa10.38□□□□□ -0.75
TRAV12-3-201ENST00000390442 CADPS2Q86UW7 1296 aa10.38□□□□□ -0.75
TRAV12-3-201ENST00000390442 NCOA3Q9Y6Q9 1424 aa10.38□□□□□ -0.75
TRAV12-3-201ENST00000390442 METP08581 1390 aa10.38□□□□□ -0.75
TRAV12-3-201ENST00000390442 PIK3R4Q99570 1358 aa10.38□□□□□ -0.75
TRAV12-3-201ENST00000390442 RXRBP28702 533 aa10.37□□□□□ -0.75
TRAV12-3-201ENST00000390442 ADGRF5Q8IZF2 1346 aa10.36□□□□□ -0.75
TRAV12-3-201ENST00000390442 PRAG1Q86YV5 1406 aa10.36□□□□□ -0.75
TRAV12-3-201ENST00000390442 NUTM2BA6NNL0 878 aaPredicted RBP10.36□□□□□ -0.75
TRAV12-3-201ENST00000390442 NUTM2EB1AL46 878 aaPredicted RBP10.36□□□□□ -0.75
TRAV12-3-201ENST00000390442 NUTM2AQ8IVF1 878 aaPredicted RBP10.36□□□□□ -0.75
TRAV12-3-201ENST00000390442 ASXL1Q8IXJ9 1541 aa10.36□□□□□ -0.75
TRAV12-3-201ENST00000390442 CDK12Q9NYV4 1490 aaPredicted RBP10.36□□□□□ -0.75
TRAV12-3-201ENST00000390442 TRIM26Q12899 539 aaPredicted RBP10.35□□□□□ -0.75
TRAV12-3-201ENST00000390442 ZNF326Q5BKZ1 582 aaKnown RBP10.35□□□□□ -0.75
TRAV12-3-201ENST00000390442 C19orf44Q9H6X5 657 aa10.35□□□□□ -0.75
TRAV12-3-201ENST00000390442 DHX57Q6P158 1386 aaKnown RBP10.35□□□□□ -0.75
TRAV12-3-201ENST00000390442 PIK3C2GO75747 1445 aa10.34□□□□□ -0.75
TRAV12-3-201ENST00000390442 AFF2P51816 1311 aa10.33□□□□□ -0.76
TRAV12-3-201ENST00000390442 SRCAPQ6ZRS2 3230 aa10.33□□□□□ -0.76
TRAV12-3-201ENST00000390442 VGFO15240 615 aaPredicted RBP10.33□□□□□ -0.76
TRAV12-3-201ENST00000390442 PLEKHG5O94827 1062 aa10.33□□□□□ -0.76
TRAV12-3-201ENST00000390442 RGL3Q3MIN7 710 aa10.33□□□□□ -0.76
TRAV12-3-201ENST00000390442 BRINP3Q76B58 766 aa10.33□□□□□ -0.76
TRAV12-3-201ENST00000390442 MYOM2P54296 1465 aa10.33□□□□□ -0.76
TRAV12-3-201ENST00000390442 AMOTL2Q9Y2J4 779 aa10.32□□□□□ -0.76
TRAV12-3-201ENST00000390442 NHSL1Q5SYE7 1610 aa10.31□□□□□ -0.76
TRAV12-3-201ENST00000390442 RGS12O14924 1447 aa10.31□□□□□ -0.76
TRAV12-3-201ENST00000390442 DCCP43146 1447 aa10.31□□□□□ -0.76
TRAV12-3-201ENST00000390442 C8orf37Q96NL8 207 aa10.3□□□□□ -0.76
TRAV12-3-201ENST00000390442 C14orf93Q9H972 538 aaKnown RBP10.3□□□□□ -0.76
TRAV12-3-201ENST00000390442 ROBO2Q9HCK4 1378 aa10.29□□□□□ -0.76
TRAV12-3-201ENST00000390442 TECPR2O15040 1411 aa10.29□□□□□ -0.76
TRAV12-3-201ENST00000390442 ADGRB1O14514 1584 aa10.29□□□□□ -0.76
TRAV12-3-201ENST00000390442 NALCNQ8IZF0 1738 aa10.28□□□□□ -0.76
TRAV12-3-201ENST00000390442 MST1RQ04912 1400 aa10.28□□□□□ -0.76
TRAV12-3-201ENST00000390442 PTCH1Q13635 1447 aa10.28□□□□□ -0.76
TRAV12-3-201ENST00000390442 RBM6P78332 1123 aaKnown RBP10.28□□□□□ -0.76
TRAV12-3-201ENST00000390442 LRRC59Q96AG4 307 aaKnown RBP10.28□□□□□ -0.76
TRAV12-3-201ENST00000390442 KNDC1Q76NI1 1749 aa10.27□□□□□ -0.76
TRAV12-3-201ENST00000390442 SIN3AQ96ST3 1273 aa10.27□□□□□ -0.77
TRAV12-3-201ENST00000390442 QTRT2Q9H974 415 aaKnown RBP10.27□□□□□ -0.77
TRAV12-3-201ENST00000390442 PNPLA6Q8IY17 1366 aa10.26□□□□□ -0.77
TRAV12-3-201ENST00000390442 ABCC11Q96J66 1382 aa10.26□□□□□ -0.77
TRAV12-3-201ENST00000390442 CFAP70Q5T0N1 1121 aa10.26□□□□□ -0.77
TRAV12-3-201ENST00000390442 TMEM132EQ6IEE7 984 aa10.26□□□□□ -0.77
TRAV12-3-201ENST00000390442 LRPPRCP42704 1394 aaKnown RBP10.26□□□□□ -0.77
TRAV12-3-201ENST00000390442 ATAD2Q6PL18 1390 aa10.26□□□□□ -0.77
TRAV12-3-201ENST00000390442 LAMC1P11047 1609 aa10.25□□□□□ -0.77
TRAV12-3-201ENST00000390442 GTPBP6O43824 516 aaPredicted RBP10.25□□□□□ -0.77
TRAV12-3-201ENST00000390442 DDX17Q92841 729 aaKnown RBP10.25□□□□□ -0.77
TRAV12-3-201ENST00000390442 NGLY1Q96IV0 654 aa10.25□□□□□ -0.77
TRAV12-3-201ENST00000390442 YTHDC2Q9H6S0 1430 aaKnown RBP10.24□□□□□ -0.77
TRAV12-3-201ENST00000390442 ADGRL3Q9HAR2 1447 aa10.24□□□□□ -0.77
TRAV12-3-201ENST00000390442 ADAMTS2O95450 1211 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms