RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 PPM1FP49593 454 aaPredicted RBP7.04□□□□□ -1.28
RFC1-202ENST00000381897 TRAK2O60296 914 aa7.03□□□□□ -1.28
RFC1-202ENST00000381897 ZFP91Q96JP5 570 aaPredicted RBP7.03□□□□□ -1.28
RFC1-202ENST00000381897 CT47B1P0C2W7 299 aaPredicted RBP7.03□□□□□ -1.28
RFC1-202ENST00000381897 FTSJ3Q8IY81 847 aaKnown RBP7.03□□□□□ -1.28
RFC1-202ENST00000381897 CLUAP1Q96AJ1 413 aa7.03□□□□□ -1.28
RFC1-202ENST00000381897 TRIM34Q9BYJ4 488 aa7.03□□□□□ -1.28
RFC1-202ENST00000381897 GRPEL1Q9HAV7 217 aa7.02□□□□□ -1.28
RFC1-202ENST00000381897 CC2D2AQ9P2K1 1620 aa7.02□□□□□ -1.29
RFC1-202ENST00000381897 POGKQ9P215 609 aa7.02□□□□□ -1.29
RFC1-202ENST00000381897 IFT140Q96RY7 1462 aa7.02□□□□□ -1.29
RFC1-202ENST00000381897 WDHD1O75717 1129 aaPredicted RBP7.02□□□□□ -1.29
RFC1-202ENST00000381897 CNGA1P29973 690 aa7.02□□□□□ -1.29
RFC1-202ENST00000381897 GTF2F1P35269 517 aaKnown RBP eCLIP7.02□□□□□ -1.29
RFC1-202ENST00000381897 GOLGA6L6A8MZA4 724 aa7.01□□□□□ -1.29
RFC1-202ENST00000381897 PEX14O75381 377 aa7.01□□□□□ -1.29
RFC1-202ENST00000381897 MCM4P33991 863 aa7.01□□□□□ -1.29
RFC1-202ENST00000381897 KIAA2012Q0VF49 1180 aa7.01□□□□□ -1.29
RFC1-202ENST00000381897 CENPJQ9HC77 1338 aaPredicted RBP7.01□□□□□ -1.29
RFC1-202ENST00000381897 RPRD2Q5VT52 1461 aaKnown RBP7.01□□□□□ -1.29
RFC1-202ENST00000381897 HECW1Q76N89 1606 aa7.01□□□□□ -1.29
RFC1-202ENST00000381897 PKD2Q13563 968 aa7.01□□□□□ -1.29
RFC1-202ENST00000381897 BTN2A1Q7KYR7 527 aa7.01□□□□□ -1.29
RFC1-202ENST00000381897 CFTRP13569 1480 aa7.01□□□□□ -1.29
RFC1-202ENST00000381897 SETQ01105 290 aaPredicted RBP7.01□□□□□ -1.29
RFC1-202ENST00000381897 CALD1Q05682 793 aaKnown RBP7.01□□□□□ -1.29
RFC1-202ENST00000381897 SERPINA10Q9UK55 444 aa7.01□□□□□ -1.29
RFC1-202ENST00000381897 CLEC11AQ9Y240 323 aa7.01□□□□□ -1.29
RFC1-202ENST00000381897 ABL1P00519 1130 aa7□□□□□ -1.29
RFC1-202ENST00000381897 CASC1Q6TDU7 716 aa7□□□□□ -1.29
RFC1-202ENST00000381897 INSRP06213 1382 aa7□□□□□ -1.29
RFC1-202ENST00000381897 ZNF692Q9BU19 519 aaPredicted RBP7□□□□□ -1.29
RFC1-202ENST00000381897 DCAF11Q8TEB1 546 aa7□□□□□ -1.29
RFC1-202ENST00000381897 CFDP1Q9UEE9 299 aaPredicted RBP7□□□□□ -1.29
RFC1-202ENST00000381897 ROCK1Q13464 1354 aa7□□□□□ -1.29
RFC1-202ENST00000381897 SYAP1Q96A49 352 aaPredicted RBP7□□□□□ -1.29
RFC1-202ENST00000381897 IGBP1P78318 339 aa6.99□□□□□ -1.29
RFC1-202ENST00000381897 KIAA1211Q6ZU35 1233 aa6.99□□□□□ -1.29
RFC1-202ENST00000381897 THOC2Q8NI27 1593 aaKnown RBP6.99□□□□□ -1.29
RFC1-202ENST00000381897 LAMC3Q9Y6N6 1575 aa6.99□□□□□ -1.29
RFC1-202ENST00000381897 NBPF8Q3BBV2 869 aa6.99□□□□□ -1.29
RFC1-202ENST00000381897 TCEAL9Q9UHQ7 104 aa6.99□□□□□ -1.29
RFC1-202ENST00000381897 NASPP49321 788 aaPredicted RBP6.99□□□□□ -1.29
RFC1-202ENST00000381897 CFAP53Q96M91 514 aa6.99□□□□□ -1.29
RFC1-202ENST00000381897 PDE3AQ14432 1141 aa6.99□□□□□ -1.29
RFC1-202ENST00000381897 ST20-MTHFSA0A0A6YYL1 179 aa6.98□□□□□ -1.29
RFC1-202ENST00000381897 ZSCAN30Q86W11 494 aa6.98□□□□□ -1.29
RFC1-202ENST00000381897 ANKRD30BQ9BXX2 1392 aa6.98□□□□□ -1.29
RFC1-202ENST00000381897 NUTM2BA6NNL0 878 aaPredicted RBP6.98□□□□□ -1.29
RFC1-202ENST00000381897 NUTM2EB1AL46 878 aaPredicted RBP6.98□□□□□ -1.29
RFC1-202ENST00000381897 PSME1Q06323 249 aa6.98□□□□□ -1.29
RFC1-202ENST00000381897 NUTM2DQ5VT03 806 aaPredicted RBP6.98□□□□□ -1.29
RFC1-202ENST00000381897 TAF3Q5VWG9 929 aa6.98□□□□□ -1.29
RFC1-202ENST00000381897 NUTM2AQ8IVF1 878 aaPredicted RBP6.98□□□□□ -1.29
RFC1-202ENST00000381897 CCDC34Q96HJ3 373 aa6.98□□□□□ -1.29
RFC1-202ENST00000381897 RRAGDQ9NQL2 400 aaPredicted RBP6.98□□□□□ -1.29
RFC1-202ENST00000381897 CCDC39Q9UFE4 941 aa6.98□□□□□ -1.29
RFC1-202ENST00000381897 LRPPRCP42704 1394 aaKnown RBP6.97□□□□□ -1.29
RFC1-202ENST00000381897 ZNF644Q9H582 1327 aaPredicted RBP6.97□□□□□ -1.29
RFC1-202ENST00000381897 TSPY2A6NKD2 308 aa6.97□□□□□ -1.29
RFC1-202ENST00000381897 PPP1R12AO14974 1030 aaPredicted RBP6.97□□□□□ -1.29
RFC1-202ENST00000381897 U2SURPO15042 1029 aaKnown RBP6.97□□□□□ -1.29
RFC1-202ENST00000381897 TSPY3P0CV98 308 aa6.97□□□□□ -1.29
RFC1-202ENST00000381897 TSPY8P0CW00 308 aa6.97□□□□□ -1.29
RFC1-202ENST00000381897 TERF1P54274 439 aa6.97□□□□□ -1.29
RFC1-202ENST00000381897 TSPY1Q01534 308 aa6.97□□□□□ -1.29
RFC1-202ENST00000381897 MAPK8IP2Q13387 824 aaPredicted RBP6.97□□□□□ -1.29
RFC1-202ENST00000381897 GNL2Q13823 731 aaKnown RBP6.97□□□□□ -1.29
RFC1-202ENST00000381897 C22orf23Q9BZE7 217 aa6.97□□□□□ -1.29
RFC1-202ENST00000381897 RBM27Q9P2N5 1060 aaKnown RBP6.97□□□□□ -1.29
RFC1-202ENST00000381897 C8orf34Q49A92 452 aa6.97□□□□□ -1.29
RFC1-202ENST00000381897 CERS3Q8IU89 383 aa6.97□□□□□ -1.29
RFC1-202ENST00000381897 KANK1Q14678 1352 aa6.97□□□□□ -1.29
RFC1-202ENST00000381897 TSR1Q2NL82 804 aaKnown RBP6.97□□□□□ -1.29
RFC1-202ENST00000381897 HSP90AB2PQ58FF8 381 aa6.97□□□□□ -1.29
RFC1-202ENST00000381897 DDX49Q9Y6V7 483 aaKnown RBP6.97□□□□□ -1.29
RFC1-202ENST00000381897 ABCA5Q8WWZ7 1642 aa6.97□□□□□ -1.29
RFC1-202ENST00000381897 KIAA1107Q9UPP5 1409 aa6.97□□□□□ -1.29
RFC1-202ENST00000381897 XRCC6P12956 609 aaKnown RBP eCLIP6.96□□□□□ -1.29
RFC1-202ENST00000381897 HSP90AB4PQ58FF6 505 aa6.96□□□□□ -1.29
RFC1-202ENST00000381897 FAM212AQ96EL1 285 aa6.96□□□□□ -1.29
RFC1-202ENST00000381897 CDCA7LQ96GN5 454 aa6.96□□□□□ -1.29
RFC1-202ENST00000381897 POLR3EQ9NVU0 708 aa6.96□□□□□ -1.29
RFC1-202ENST00000381897 DHX29Q7Z478 1369 aaKnown RBP6.96□□□□□ -1.29
RFC1-202ENST00000381897 G3BP2Q9UN86 482 aaKnown RBP6.96□□□□□ -1.3
RFC1-202ENST00000381897 A0A0G2JS52 829 aa6.95□□□□□ -1.3
RFC1-202ENST00000381897 GRXCR2A6NFK2 248 aa6.95□□□□□ -1.3
RFC1-202ENST00000381897 TANGO6Q9C0B7 1094 aa6.95□□□□□ -1.3
RFC1-202ENST00000381897 ZHX3Q9H4I2 956 aa6.95□□□□□ -1.3
RFC1-202ENST00000381897 NUP155O75694 1391 aa6.95□□□□□ -1.3
RFC1-202ENST00000381897 TSNAXIP1Q2TAA8 658 aa6.95□□□□□ -1.3
RFC1-202ENST00000381897 TMA7Q9Y2S6 64 aaKnown RBP6.95□□□□□ -1.3
RFC1-202ENST00000381897 MCM5P33992 734 aa6.95□□□□□ -1.3
RFC1-202ENST00000381897 RETREG2Q8NC44 543 aa6.95□□□□□ -1.3
RFC1-202ENST00000381897 CUL7Q14999 1698 aa6.94□□□□□ -1.3
RFC1-202ENST00000381897 IPO8O15397 1037 aaKnown RBP6.94□□□□□ -1.3
RFC1-202ENST00000381897 NUCB2P80303 420 aa6.94□□□□□ -1.3
RFC1-202ENST00000381897 CREBRFQ8IUR6 639 aa6.94□□□□□ -1.3
RFC1-202ENST00000381897 SMAP1Q8IYB5 467 aaPredicted RBP6.94□□□□□ -1.3
RFC1-202ENST00000381897 PANK3Q9H999 370 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms