RNA–Protein interactions for RNA: ENST00000378702.8

DMD-209, Transcript of dystrophin, humanhuman

TSL 1 (best) BASIC

Gene DMD, Length 2,617 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-209ENST00000378702 TRPM1Q7Z4N2 1603 aa12.76□□□□□ -0.37
DMD-209ENST00000378702 IRX5P78411 483 aaPredicted RBP12.75□□□□□ -0.37
DMD-209ENST00000378702 PRIM1P49642 420 aaKnown RBP12.75□□□□□ -0.37
DMD-209ENST00000378702 KIF3AQ9Y496 699 aa12.75□□□□□ -0.37
DMD-209ENST00000378702 PKD2Q13563 968 aa12.75□□□□□ -0.37
DMD-209ENST00000378702 CAVIN1Q6NZI2 390 aaKnown RBP12.75□□□□□ -0.37
DMD-209ENST00000378702 PDCL2Q8N4E4 241 aa12.74□□□□□ -0.37
DMD-209ENST00000378702 NESP48681 1621 aa12.74□□□□□ -0.37
DMD-209ENST00000378702 SPDYE4A6NLX3 237 aa12.74□□□□□ -0.37
DMD-209ENST00000378702 PPP2R1AP30153 589 aa12.74□□□□□ -0.37
DMD-209ENST00000378702 BCL2L12Q9HB09 334 aa12.73□□□□□ -0.37
DMD-209ENST00000378702 ADGBQ8N7X0 1667 aa12.73□□□□□ -0.37
DMD-209ENST00000378702 CHRM1P11229 460 aaPredicted RBP12.73□□□□□ -0.37
DMD-209ENST00000378702 ZNF771Q7L3S4 317 aaPredicted RBP12.73□□□□□ -0.37
DMD-209ENST00000378702 TEX2Q8IWB9 1127 aa12.73□□□□□ -0.37
DMD-209ENST00000378702 LAMC1P11047 1609 aa12.72□□□□□ -0.37
DMD-209ENST00000378702 DISP3Q9P2K9 1392 aa12.72□□□□□ -0.37
DMD-209ENST00000378702 K7ELQ4 463 aaPredicted RBP12.72□□□□□ -0.37
DMD-209ENST00000378702 FEZ1Q99689 392 aa12.72□□□□□ -0.37
DMD-209ENST00000378702 PIK3C2GO75747 1445 aa12.72□□□□□ -0.37
DMD-209ENST00000378702 GABPB1Q06547 395 aaPredicted RBP12.72□□□□□ -0.37
DMD-209ENST00000378702 PIBF1Q8WXW3 757 aa12.72□□□□□ -0.37
DMD-209ENST00000378702 DNAJC2Q99543 621 aaKnown RBP12.72□□□□□ -0.37
DMD-209ENST00000378702 LMBRD1Q9NUN5 540 aa12.72□□□□□ -0.37
DMD-209ENST00000378702 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.72□□□□□ -0.37
DMD-209ENST00000378702 NGEFQ8N5V2 710 aa12.71□□□□□ -0.37
DMD-209ENST00000378702 ANKRD7Q92527 254 aa12.71□□□□□ -0.37
DMD-209ENST00000378702 LRSAM1Q6UWE0 723 aa12.71□□□□□ -0.38
DMD-209ENST00000378702 ZFP91Q96JP5 570 aaPredicted RBP12.71□□□□□ -0.38
DMD-209ENST00000378702 KIF2CQ99661 725 aa12.71□□□□□ -0.38
DMD-209ENST00000378702 IGSF3O75054 1194 aa12.7□□□□□ -0.38
DMD-209ENST00000378702 GPRASP1Q5JY77 1395 aa12.7□□□□□ -0.38
DMD-209ENST00000378702 AK9Q5TCS8 1911 aa12.7□□□□□ -0.38
DMD-209ENST00000378702 KDM5DQ9BY66 1539 aa12.7□□□□□ -0.38
DMD-209ENST00000378702 APAF1O14727 1248 aa12.69□□□□□ -0.38
DMD-209ENST00000378702 CD2BP2O95400 341 aaKnown RBP12.69□□□□□ -0.38
DMD-209ENST00000378702 RLBP1P12271 317 aa12.69□□□□□ -0.38
DMD-209ENST00000378702 U2AF2P26368 475 aaKnown RBP eCLIP12.69□□□□□ -0.384e-6■■□□□ 13.2
DMD-209ENST00000378702 TESK2Q96S53 571 aa12.69□□□□□ -0.38
DMD-209ENST00000378702 KDM2AQ9Y2K7 1162 aa12.69□□□□□ -0.38
DMD-209ENST00000378702 DMRT2Q9Y5R5 561 aa12.69□□□□□ -0.38
DMD-209ENST00000378702 PRDM15P57071 1507 aaPredicted RBP12.69□□□□□ -0.38
DMD-209ENST00000378702 KCNJ4P48050 445 aa12.69□□□□□ -0.38
DMD-209ENST00000378702 MCTP1Q6DN14 999 aa12.69□□□□□ -0.38
DMD-209ENST00000378702 FOXD4L1Q9NU39 408 aa12.69□□□□□ -0.38
DMD-209ENST00000378702 OGFRQ9NZT2 677 aa12.69□□□□□ -0.38
DMD-209ENST00000378702 IRX3P78415 501 aaPredicted RBP12.68□□□□□ -0.38
DMD-209ENST00000378702 FKBP5Q13451 457 aaPredicted RBP12.68□□□□□ -0.38
DMD-209ENST00000378702 NOLC1Q14978 699 aaKnown RBP eCLIP12.68□□□□□ -0.38
DMD-209ENST00000378702 CCDC146Q8IYE0 955 aa12.68□□□□□ -0.38
DMD-209ENST00000378702 GAS2L2Q8NHY3 880 aa12.68□□□□□ -0.38
DMD-209ENST00000378702 PRAG1Q86YV5 1406 aa12.68□□□□□ -0.38
DMD-209ENST00000378702 ERBINQ96RT1 1412 aa12.68□□□□□ -0.38
DMD-209ENST00000378702 ABCA10Q8WWZ4 1543 aa12.68□□□□□ -0.38
DMD-209ENST00000378702 ITSN2Q9NZM3 1697 aa12.68□□□□□ -0.38
DMD-209ENST00000378702 CCDC66A2RUB6 948 aa12.68□□□□□ -0.38
DMD-209ENST00000378702 EIF4G3O43432 1585 aaKnown RBP12.68□□□□□ -0.38
DMD-209ENST00000378702 PTMAP06454 111 aaKnown RBP12.67□□□□□ -0.38
DMD-209ENST00000378702 SPTLC3Q9NUV7 552 aa12.67□□□□□ -0.38
DMD-209ENST00000378702 FAM177BA6PVY3 158 aa12.67□□□□□ -0.38
DMD-209ENST00000378702 CYP2E1P05181 493 aaPredicted RBP12.67□□□□□ -0.38
DMD-209ENST00000378702 RARSP54136 660 aaKnown RBP12.67□□□□□ -0.38
DMD-209ENST00000378702 ADGRL2O95490 1459 aa12.67□□□□□ -0.38
DMD-209ENST00000378702 GRIN2AQ12879 1464 aa12.67□□□□□ -0.38
DMD-209ENST00000378702 RGS22Q8NE09 1264 aa12.66□□□□□ -0.38
DMD-209ENST00000378702 NPC1L1Q9UHC9 1359 aa12.66□□□□□ -0.38
DMD-209ENST00000378702 SLFN14P0C7P3 912 aa12.66□□□□□ -0.38
DMD-209ENST00000378702 NUCB2P80303 420 aa12.66□□□□□ -0.38
DMD-209ENST00000378702 GPT2Q8TD30 523 aa12.66□□□□□ -0.38
DMD-209ENST00000378702 MAGI2Q86UL8 1455 aa12.65□□□□□ -0.38
DMD-209ENST00000378702 TIGD1Q96MW7 591 aa12.65□□□□□ -0.38
DMD-209ENST00000378702 ABCC10Q5T3U5 1492 aa12.65□□□□□ -0.38
DMD-209ENST00000378702 TULP2O00295 520 aa12.65□□□□□ -0.38
DMD-209ENST00000378702 RBM27Q9P2N5 1060 aaKnown RBP12.65□□□□□ -0.38
DMD-209ENST00000378702 TNNQ9UQP3 1299 aa12.65□□□□□ -0.38
DMD-209ENST00000378702 CDK13Q14004 1512 aaKnown RBP12.65□□□□□ -0.39
DMD-209ENST00000378702 CTIFO43310 598 aaKnown RBP12.64□□□□□ -0.39
DMD-209ENST00000378702 KIF16BQ96L93 1317 aa12.64□□□□□ -0.39
DMD-209ENST00000378702 HDAC1Q13547 482 aaPredicted RBP12.64□□□□□ -0.39
DMD-209ENST00000378702 AMER1Q5JTC6 1135 aaPredicted RBP12.64□□□□□ -0.39
DMD-209ENST00000378702 TMEM63CQ9P1W3 806 aa12.64□□□□□ -0.39
DMD-209ENST00000378702 WDR7Q9Y4E6 1490 aa12.64□□□□□ -0.39
DMD-209ENST00000378702 SYCE3A1L190 88 aa12.63□□□□□ -0.39
DMD-209ENST00000378702 CROCC2H7BZ55 1655 aa12.63□□□□□ -0.39
DMD-209ENST00000378702 POLA1P09884 1462 aaPredicted RBP12.63□□□□□ -0.39
DMD-209ENST00000378702 ZNF644Q9H582 1327 aaPredicted RBP12.63□□□□□ -0.39
DMD-209ENST00000378702 TMF1P82094 1093 aa12.63□□□□□ -0.39
DMD-209ENST00000378702 MVPQ14764 893 aaKnown RBP12.63□□□□□ -0.39
DMD-209ENST00000378702 DIAPH3Q9NSV4 1193 aa12.63□□□□□ -0.39
DMD-209ENST00000378702 ZBTB7CA1YPR0 619 aa12.62□□□□□ -0.39
DMD-209ENST00000378702 KLHL34Q8N239 644 aa12.62□□□□□ -0.39
DMD-209ENST00000378702 SECISBP2LQ93073 1101 aaKnown RBP12.62□□□□□ -0.39
DMD-209ENST00000378702 KNSTRNQ9Y448 316 aa12.62□□□□□ -0.39
DMD-209ENST00000378702 WWC1Q8IX03 1113 aa12.61□□□□□ -0.39
DMD-209ENST00000378702 ASXL1Q8IXJ9 1541 aa12.61□□□□□ -0.39
DMD-209ENST00000378702 PRPF40AO75400 957 aaKnown RBP12.61□□□□□ -0.39
DMD-209ENST00000378702 CAPN2P17655 700 aa12.61□□□□□ -0.39
DMD-209ENST00000378702 RIOK3O14730 519 aaKnown RBP12.6□□□□□ -0.39
DMD-209ENST00000378702 RNF214Q8ND24 703 aa12.6□□□□□ -0.39
DMD-209ENST00000378702 CHMP4AQ9BY43 222 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms