RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 CBFA2T2O43439 604 aa7.9□□□□□ -1.14
UBR4-204ENST00000375254 CRACR2AQ9BSW2 395 aa7.9□□□□□ -1.14
UBR4-204ENST00000375254 FBXO3Q9UK99 471 aa7.9□□□□□ -1.14
UBR4-204ENST00000375254 GOLIM4O00461 696 aa7.9□□□□□ -1.15
UBR4-204ENST00000375254 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.9□□□□□ -1.15
UBR4-204ENST00000375254 SDF4Q9BRK5 362 aa7.89□□□□□ -1.15
UBR4-204ENST00000375254 VGFO15240 615 aaPredicted RBP7.89□□□□□ -1.15
UBR4-204ENST00000375254 TCHPQ9BT92 498 aa7.89□□□□□ -1.15
UBR4-204ENST00000375254 ZNHIT6Q9NWK9 470 aaKnown RBP7.89□□□□□ -1.15
UBR4-204ENST00000375254 B4GALNT4Q76KP1 1039 aa7.89□□□□□ -1.15
UBR4-204ENST00000375254 ROCK2O75116 1388 aaKnown RBP7.89□□□□□ -1.15
UBR4-204ENST00000375254 PTPN14Q15678 1187 aa7.89□□□□□ -1.15
UBR4-204ENST00000375254 PAXIP1Q6ZW49 1069 aaPredicted RBP7.89□□□□□ -1.15
UBR4-204ENST00000375254 INTS3Q68E01 1043 aaKnown RBP7.89□□□□□ -1.15
UBR4-204ENST00000375254 ATP6V1AP38606 617 aa7.89□□□□□ -1.15
UBR4-204ENST00000375254 ZHX1Q9UKY1 873 aaPredicted RBP7.89□□□□□ -1.15
UBR4-204ENST00000375254 ERICH4A6NGS2 130 aa7.89□□□□□ -1.15
UBR4-204ENST00000375254 FILIP1LQ4L180 1135 aa7.88□□□□□ -1.15
UBR4-204ENST00000375254 CCDC38Q502W7 563 aa7.88□□□□□ -1.15
UBR4-204ENST00000375254 ODF2Q5BJF6 829 aa7.88□□□□□ -1.15
UBR4-204ENST00000375254 CCDC73Q6ZRK6 1079 aa7.88□□□□□ -1.15
UBR4-204ENST00000375254 ITPRIPQ8IWB1 547 aa7.88□□□□□ -1.15
UBR4-204ENST00000375254 RNF168Q8IYW5 571 aaPredicted RBP7.88□□□□□ -1.15
UBR4-204ENST00000375254 PPM1EQ8WY54 764 aa7.88□□□□□ -1.15
UBR4-204ENST00000375254 DAAM2Q86T65 1068 aa7.88□□□□□ -1.15
UBR4-204ENST00000375254 FMNL2Q96PY5 1086 aa7.88□□□□□ -1.15
UBR4-204ENST00000375254 HSPA4P34932 840 aa7.88□□□□□ -1.15
UBR4-204ENST00000375254 CENPJQ9HC77 1338 aaPredicted RBP7.88□□□□□ -1.15
UBR4-204ENST00000375254 PLEKHG5O94827 1062 aa7.88□□□□□ -1.15
UBR4-204ENST00000375254 SEPT6Q14141 434 aa7.88□□□□□ -1.15
UBR4-204ENST00000375254 ZSCAN12O43309 604 aa7.88□□□□□ -1.15
UBR4-204ENST00000375254 WWC1Q8IX03 1113 aa7.88□□□□□ -1.15
UBR4-204ENST00000375254 RBM33Q96EV2 1170 aaKnown RBP7.88□□□□□ -1.15
UBR4-204ENST00000375254 BCL11BQ9C0K0 894 aaPredicted RBP7.88□□□□□ -1.15
UBR4-204ENST00000375254 PSMA5P28066 241 aa7.87□□□□□ -1.15
UBR4-204ENST00000375254 CENPHQ9H3R5 247 aa7.87□□□□□ -1.15
UBR4-204ENST00000375254 SMC4Q9NTJ3 1288 aa7.87□□□□□ -1.15
UBR4-204ENST00000375254 GSDMDP57764 484 aa7.87□□□□□ -1.15
UBR4-204ENST00000375254 SMTNL1A8MU46 457 aa7.87□□□□□ -1.15
UBR4-204ENST00000375254 KTN1Q86UP2 1357 aaKnown RBP7.87□□□□□ -1.15
UBR4-204ENST00000375254 EBAG9O00559 213 aa7.87□□□□□ -1.15
UBR4-204ENST00000375254 CCDC196A0A1B0GTZ2 297 aa7.86□□□□□ -1.15
UBR4-204ENST00000375254 TUBB2AQ13885 445 aa7.86□□□□□ -1.15
UBR4-204ENST00000375254 TUBB2BQ9BVA1 445 aa7.86□□□□□ -1.15
UBR4-204ENST00000375254 MKRN1Q9UHC7 482 aaKnown RBP7.86□□□□□ -1.15
UBR4-204ENST00000375254 GTF2F1P35269 517 aaKnown RBP eCLIP7.86□□□□□ -1.15
UBR4-204ENST00000375254 MAP2K1Q02750 393 aaPredicted RBP7.86□□□□□ -1.15
UBR4-204ENST00000375254 PAK3O75914 559 aaPredicted RBP7.86□□□□□ -1.15
UBR4-204ENST00000375254 MAP2K2P36507 400 aa7.86□□□□□ -1.15
UBR4-204ENST00000375254 SPECC1LQ69YQ0 1117 aa7.86□□□□□ -1.15
UBR4-204ENST00000375254 IMMTQ16891 758 aaKnown RBP7.86□□□□□ -1.15
UBR4-204ENST00000375254 SMC3Q9UQE7 1217 aa7.86□□□□□ -1.15
UBR4-204ENST00000375254 ARFGAP3Q9NP61 516 aa7.85□□□□□ -1.15
UBR4-204ENST00000375254 KIF5BP33176 963 aa7.85□□□□□ -1.15
UBR4-204ENST00000375254 ZKSCAN2Q63HK3 967 aa7.85□□□□□ -1.15
UBR4-204ENST00000375254 ZFYP08048 801 aaPredicted RBP7.85□□□□□ -1.15
UBR4-204ENST00000375254 ANKS4BQ8N8V4 417 aa7.85□□□□□ -1.15
UBR4-204ENST00000375254 USH1CQ9Y6N9 552 aa7.85□□□□□ -1.15
UBR4-204ENST00000375254 CCDC102AQ96A19 550 aa7.85□□□□□ -1.15
UBR4-204ENST00000375254 DACH1Q9UI36 760 aa7.85□□□□□ -1.15
UBR4-204ENST00000375254 CTAGE5O15320 804 aa7.85□□□□□ -1.15
UBR4-204ENST00000375254 PPFIBP1Q86W92 1011 aa7.84□□□□□ -1.15
UBR4-204ENST00000375254 ANKRD45Q5TZF3 282 aa7.84□□□□□ -1.15
UBR4-204ENST00000375254 ERCC3P19447 782 aa7.84□□□□□ -1.15
UBR4-204ENST00000375254 CCDC148Q8NFR7 591 aa7.84□□□□□ -1.15
UBR4-204ENST00000375254 TXLNAP40222 546 aa7.84□□□□□ -1.15
UBR4-204ENST00000375254 PDE3AQ14432 1141 aa7.84□□□□□ -1.15
UBR4-204ENST00000375254 SYNE3Q6ZMZ3 975 aa7.84□□□□□ -1.15
UBR4-204ENST00000375254 GBP6Q6ZN66 633 aa7.84□□□□□ -1.15
UBR4-204ENST00000375254 CFAP45Q9UL16 551 aa7.84□□□□□ -1.15
UBR4-204ENST00000375254 NAP1L1P55209 391 aaKnown RBP7.84□□□□□ -1.15
UBR4-204ENST00000375254 PLCD3Q8N3E9 789 aa7.84□□□□□ -1.15
UBR4-204ENST00000375254 OTUD6BQ8N6M0 293 aa7.84□□□□□ -1.16
UBR4-204ENST00000375254 KINO60870 393 aaKnown RBP7.83□□□□□ -1.16
UBR4-204ENST00000375254 BICD2Q8TD16 824 aa7.83□□□□□ -1.16
UBR4-204ENST00000375254 KIF1CO43896 1103 aaKnown RBP7.83□□□□□ -1.16
UBR4-204ENST00000375254 POTEDQ86YR6 584 aa7.83□□□□□ -1.16
UBR4-204ENST00000375254 TICAM2Q86XR7 235 aa7.83□□□□□ -1.16
UBR4-204ENST00000375254 CEP120Q8N960 986 aa7.83□□□□□ -1.16
UBR4-204ENST00000375254 ZNF396Q96N95 335 aaPredicted RBP7.83□□□□□ -1.16
UBR4-204ENST00000375254 BRMS1Q9HCU9 246 aa7.83□□□□□ -1.16
UBR4-204ENST00000375254 WDR33Q9C0J8 1336 aaKnown RBP7.83□□□□□ -1.16
UBR4-204ENST00000375254 TACO1Q9BSH4 297 aaKnown RBP7.83□□□□□ -1.16
UBR4-204ENST00000375254 SMC2O95347 1197 aa7.83□□□□□ -1.16
UBR4-204ENST00000375254 DDX46Q7L014 1031 aaKnown RBP7.83□□□□□ -1.16
UBR4-204ENST00000375254 RNF214Q8ND24 703 aa7.83□□□□□ -1.16
UBR4-204ENST00000375254 DDX19BQ9UMR2 479 aa7.83□□□□□ -1.16
UBR4-204ENST00000375254 NINLQ9Y2I6 1382 aa7.83□□□□□ -1.16
UBR4-204ENST00000375254 GIGYF2Q6Y7W6 1299 aaKnown RBP7.83□□□□□ -1.16
UBR4-204ENST00000375254 PPFIA3O75145 1194 aa7.83□□□□□ -1.16
UBR4-204ENST00000375254 LMAN1P49257 510 aa7.82□□□□□ -1.16
UBR4-204ENST00000375254 DBN1Q16643 649 aa7.82□□□□□ -1.16
UBR4-204ENST00000375254 NPHP1O15259 732 aa7.82□□□□□ -1.16
UBR4-204ENST00000375254 CASQ1P31415 396 aa7.82□□□□□ -1.16
UBR4-204ENST00000375254 JMYQ8N9B5 988 aa7.82□□□□□ -1.16
UBR4-204ENST00000375254 KLHL10Q6JEL2 608 aa7.82□□□□□ -1.16
UBR4-204ENST00000375254 TRIM29Q14134 588 aa7.82□□□□□ -1.16
UBR4-204ENST00000375254 SEPT7Q16181 437 aaKnown RBP7.82□□□□□ -1.16
UBR4-204ENST00000375254 ZBTB17Q13105 803 aa7.82□□□□□ -1.16
UBR4-204ENST00000375254 NUP133Q8WUM0 1156 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms