RNA–Protein interactions for RNA: ENST00000373063.7

FOXP4-204, Transcript of forkhead box P4, humanhuman

TSL 1 (best) BASIC

Gene FOXP4, Length 5,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP4-204ENST00000373063 TSR1Q2NL82 804 aaKnown RBP27.5■■□□□ 1.99
FOXP4-204ENST00000373063 RNF20Q5VTR2 975 aa27.5■■□□□ 1.99
FOXP4-204ENST00000373063 PRAM1Q96QH2 718 aa27.5■■□□□ 1.99
FOXP4-204ENST00000373063 RRP1P56182 461 aaKnown RBP27.5■■□□□ 1.99
FOXP4-204ENST00000373063 ATP6V1DQ9Y5K8 247 aa27.5■■□□□ 1.99
FOXP4-204ENST00000373063 TATP17735 454 aaPredicted RBP27.49■■□□□ 1.99
FOXP4-204ENST00000373063 NCOA2Q15596 1464 aa27.49■■□□□ 1.99
FOXP4-204ENST00000373063 ANKLE2Q86XL3 938 aa27.49■■□□□ 1.99
FOXP4-204ENST00000373063 WASHC4Q2M389 1173 aa27.48■■□□□ 1.99
FOXP4-204ENST00000373063 GOLGA6L3A6NEY3 463 aa27.48■■□□□ 1.99
FOXP4-204ENST00000373063 REC8O95072 547 aa27.48■■□□□ 1.99
FOXP4-204ENST00000373063 CCDC47Q96A33 483 aaKnown RBP27.48■■□□□ 1.99
FOXP4-204ENST00000373063 POGZQ7Z3K3 1410 aa27.48■■□□□ 1.99
FOXP4-204ENST00000373063 TOM1L2Q6ZVM7 507 aa27.47■■□□□ 1.99
FOXP4-204ENST00000373063 CFAP70Q5T0N1 1121 aa27.47■■□□□ 1.99
FOXP4-204ENST00000373063 ERC2O15083 957 aa27.47■■□□□ 1.99
FOXP4-204ENST00000373063 GAS2L2Q8NHY3 880 aa27.47■■□□□ 1.99
FOXP4-204ENST00000373063 NESP48681 1621 aa27.46■■□□□ 1.99
FOXP4-204ENST00000373063 KRI1Q8N9T8 703 aaKnown RBP27.46■■□□□ 1.99
FOXP4-204ENST00000373063 EXOC6Q8TAG9 804 aa27.45■■□□□ 1.99
FOXP4-204ENST00000373063 UBTFL1P0CB47 393 aaPredicted RBP27.45■■□□□ 1.98
FOXP4-204ENST00000373063 CASKIN1Q8WXD9 1431 aa27.44■■□□□ 1.98
FOXP4-204ENST00000373063 SCAPERQ9BY12 1400 aa27.43■■□□□ 1.98
FOXP4-204ENST00000373063 DDX54Q8TDD1 881 aaKnown RBP27.42■■□□□ 1.98
FOXP4-204ENST00000373063 LRRC9Q6ZRR7 1453 aa27.41■■□□□ 1.98
FOXP4-204ENST00000373063 FAM161AQ3B820 660 aa27.41■■□□□ 1.98
FOXP4-204ENST00000373063 PCMTD1Q96MG8 357 aaPredicted RBP27.41■■□□□ 1.98
FOXP4-204ENST00000373063 GOLGA6L19H0YKK7 550 aa27.4■■□□□ 1.98
FOXP4-204ENST00000373063 IKQ13123 557 aaPredicted RBP27.4■■□□□ 1.98
FOXP4-204ENST00000373063 TPM1P09493 284 aa27.4■■□□□ 1.98
FOXP4-204ENST00000373063 MTMR7Q9Y216 660 aa27.4■■□□□ 1.98
FOXP4-204ENST00000373063 CCDC30Q5VVM6 783 aa27.4■■□□□ 1.98
FOXP4-204ENST00000373063 DEKP35659 375 aaKnown RBP27.39■■□□□ 1.98
FOXP4-204ENST00000373063 CABP4P57796 275 aa27.39■■□□□ 1.98
FOXP4-204ENST00000373063 SNAPC4Q5SXM2 1469 aa27.39■■□□□ 1.98
FOXP4-204ENST00000373063 RALYLQ86SE5 291 aaKnown RBP27.39■■□□□ 1.98
FOXP4-204ENST00000373063 RAPGEF3O95398 923 aa27.39■■□□□ 1.97
FOXP4-204ENST00000373063 BECN2A8MW95 431 aa27.39■■□□□ 1.97
FOXP4-204ENST00000373063 CC2D2AQ9P2K1 1620 aa27.38■■□□□ 1.97
FOXP4-204ENST00000373063 IPO9Q96P70 1041 aaKnown RBP27.38■■□□□ 1.97
FOXP4-204ENST00000373063 MTHFSP49914 203 aa27.38■■□□□ 1.97
FOXP4-204ENST00000373063 PLEKHH2Q8IVE3 1493 aa27.38■■□□□ 1.97
FOXP4-204ENST00000373063 CDK19Q9BWU1 502 aa27.37■■□□□ 1.97
FOXP4-204ENST00000373063 ZBED9Q6R2W3 1325 aa27.37■■□□□ 1.97
FOXP4-204ENST00000373063 DDX11L8A8MPP1 907 aa27.36■■□□□ 1.97
FOXP4-204ENST00000373063 FOSBP53539 338 aa27.36■■□□□ 1.97
FOXP4-204ENST00000373063 GOLGA6L1Q8N7Z2 621 aa27.35■■□□□ 1.97
FOXP4-204ENST00000373063 TBC1D2BQ9UPU7 963 aa27.35■■□□□ 1.97
FOXP4-204ENST00000373063 CCAR1Q8IX12 1150 aaKnown RBP27.35■■□□□ 1.97
FOXP4-204ENST00000373063 SLC26A8Q96RN1 970 aa27.35■■□□□ 1.97
FOXP4-204ENST00000373063 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.33■■□□□ 1.97
FOXP4-204ENST00000373063 SAFBQ15424 915 aaKnown RBP eCLIP27.33■■□□□ 1.97
FOXP4-204ENST00000373063 SPG7Q9UQ90 795 aa27.33■■□□□ 1.97
FOXP4-204ENST00000373063 KIF7Q2M1P5 1343 aa27.32■■□□□ 1.96
FOXP4-204ENST00000373063 INTS3Q68E01 1043 aaKnown RBP27.32■■□□□ 1.96
FOXP4-204ENST00000373063 PRDM11Q9NQV5 511 aa27.32■■□□□ 1.96
FOXP4-204ENST00000373063 HOOK1Q9UJC3 728 aaKnown RBP27.31■■□□□ 1.96
FOXP4-204ENST00000373063 PRKAR2BP31323 418 aa27.31■■□□□ 1.96
FOXP4-204ENST00000373063 KIF21BO75037 1637 aa27.31■■□□□ 1.96
FOXP4-204ENST00000373063 CNNM1Q9NRU3 951 aa27.31■■□□□ 1.96
FOXP4-204ENST00000373063 ANKRD20A12PQ8NF67 263 aa27.3■■□□□ 1.96
FOXP4-204ENST00000373063 C9orf84Q5VXU9 1444 aa27.3■■□□□ 1.96
FOXP4-204ENST00000373063 ZNF692Q9BU19 519 aaPredicted RBP27.3■■□□□ 1.96
FOXP4-204ENST00000373063 CCDC7Q96M83 1385 aa27.3■■□□□ 1.96
FOXP4-204ENST00000373063 SLC52A1Q9NWF4 448 aa27.29■■□□□ 1.96
FOXP4-204ENST00000373063 DDX49Q9Y6V7 483 aaKnown RBP27.29■■□□□ 1.96
FOXP4-204ENST00000373063 NINLQ9Y2I6 1382 aa27.29■■□□□ 1.96
FOXP4-204ENST00000373063 DNAJC2Q99543 621 aaKnown RBP27.29■■□□□ 1.96
FOXP4-204ENST00000373063 ARID3AQ99856 593 aa27.29■■□□□ 1.96
FOXP4-204ENST00000373063 FSD1Q9BTV5 496 aa27.28■■□□□ 1.96
FOXP4-204ENST00000373063 CABP1Q9NZU7 370 aa27.28■■□□□ 1.96
FOXP4-204ENST00000373063 BRMS1Q9HCU9 246 aa27.28■■□□□ 1.96
FOXP4-204ENST00000373063 CNTLNQ9NXG0 1405 aa27.28■■□□□ 1.96
FOXP4-204ENST00000373063 SLC4A3P48751 1232 aa27.27■■□□□ 1.96
FOXP4-204ENST00000373063 XPCQ01831 940 aaPredicted RBP27.27■■□□□ 1.96
FOXP4-204ENST00000373063 BICD2Q8TD16 824 aa27.27■■□□□ 1.96
FOXP4-204ENST00000373063 RTEL1-TNFRSF6BF6WH68 1400 aa27.27■■□□□ 1.96
FOXP4-204ENST00000373063 LNPKQ9C0E8 428 aa27.27■■□□□ 1.96
FOXP4-204ENST00000373063 VPS37CA5D8V6 355 aaPredicted RBP27.26■■□□□ 1.95
FOXP4-204ENST00000373063 ZNF530Q6P9A1 599 aaPredicted RBP27.26■■□□□ 1.95
FOXP4-204ENST00000373063 GNL3LQ9NVN8 582 aaKnown RBP27.25■■□□□ 1.95
FOXP4-204ENST00000373063 PDE4AP27815 886 aa27.25■■□□□ 1.95
FOXP4-204ENST00000373063 SMC3Q9UQE7 1217 aa27.25■■□□□ 1.95
FOXP4-204ENST00000373063 TTC39AQ5SRH9 613 aa27.25■■□□□ 1.95
FOXP4-204ENST00000373063 GNAI3P08754 354 aa27.24■■□□□ 1.95
FOXP4-204ENST00000373063 CNTROBQ8N137 903 aa27.24■■□□□ 1.95
FOXP4-204ENST00000373063 SLC3A2P08195 630 aaKnown RBP27.24■■□□□ 1.95
FOXP4-204ENST00000373063 R3HCC1Q9Y3T6 440 aaKnown RBP27.24■■□□□ 1.95
FOXP4-204ENST00000373063 CFTRP13569 1480 aa27.23■■□□□ 1.95
FOXP4-204ENST00000373063 KDM4AO75164 1064 aa27.23■■□□□ 1.95
FOXP4-204ENST00000373063 SULT6B1Q6IMI4 303 aa27.23■■□□□ 1.95
FOXP4-204ENST00000373063 CLASRPQ8N2M8 674 aaKnown RBP27.23■■□□□ 1.95
FOXP4-204ENST00000373063 SURF6O75683 361 aaKnown RBP27.22■■□□□ 1.95
FOXP4-204ENST00000373063 XBP1P17861 261 aa27.22■■□□□ 1.95
FOXP4-204ENST00000373063 SART3Q15020 963 aaKnown RBP27.22■■□□□ 1.95
FOXP4-204ENST00000373063 TOPBP1Q92547 1522 aa27.21■■□□□ 1.95
FOXP4-204ENST00000373063 PANK1Q8TE04 598 aa27.21■■□□□ 1.95
FOXP4-204ENST00000373063 IPO7O95373 1038 aaKnown RBP27.2■■□□□ 1.95
FOXP4-204ENST00000373063 TCP11L2Q8N4U5 519 aa27.2■■□□□ 1.95
FOXP4-204ENST00000373063 HFM1A2PYH4 1435 aa27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms