RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 CT47A1Q5JQC4 288 aaPredicted RBP13.08□□□□□ -0.32
TRERF1-203ENST00000372917 CFDP1Q9UEE9 299 aaPredicted RBP13.08□□□□□ -0.32
TRERF1-203ENST00000372917 MIA2Q96PC5 1412 aa13.08□□□□□ -0.32
TRERF1-203ENST00000372917 KIF15Q9NS87 1388 aa13.08□□□□□ -0.32
TRERF1-203ENST00000372917 TERF2Q15554 542 aa13.07□□□□□ -0.32
TRERF1-203ENST00000372917 PLCD4Q9BRC7 762 aa13.07□□□□□ -0.32
TRERF1-203ENST00000372917 SMC4Q9NTJ3 1288 aa13.07□□□□□ -0.32
TRERF1-203ENST00000372917 PHF14O94880 888 aa13.07□□□□□ -0.32
TRERF1-203ENST00000372917 C17orf53Q8N3J3 647 aaPredicted RBP13.07□□□□□ -0.32
TRERF1-203ENST00000372917 SNAPC4Q5SXM2 1469 aa13.07□□□□□ -0.32
TRERF1-203ENST00000372917 TSPY4P0CV99 314 aa13.07□□□□□ -0.32
TRERF1-203ENST00000372917 TSPY10P0CW01 314 aa13.07□□□□□ -0.32
TRERF1-203ENST00000372917 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.07□□□□□ -0.32
TRERF1-203ENST00000372917 RNF214Q8ND24 703 aa13.07□□□□□ -0.32
TRERF1-203ENST00000372917 SIRT1Q96EB6 747 aa13.07□□□□□ -0.32
TRERF1-203ENST00000372917 RAD54L2Q9Y4B4 1467 aa13.07□□□□□ -0.32
TRERF1-203ENST00000372917 RBM25P49756 843 aaKnown RBP13.07□□□□□ -0.32
TRERF1-203ENST00000372917 RPRD2Q5VT52 1461 aaKnown RBP13.06□□□□□ -0.32
TRERF1-203ENST00000372917 EGFL6Q8IUX8 553 aa13.06□□□□□ -0.32
TRERF1-203ENST00000372917 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.06□□□□□ -0.32
TRERF1-203ENST00000372917 TDRD9Q8NDG6 1382 aaKnown RBP13.06□□□□□ -0.32
TRERF1-203ENST00000372917 CFAP44Q96MT7 982 aa13.06□□□□□ -0.32
TRERF1-203ENST00000372917 MYBBP1AQ9BQG0 1328 aaKnown RBP13.06□□□□□ -0.32
TRERF1-203ENST00000372917 SRPK2P78362 688 aaKnown RBP13.06□□□□□ -0.32
TRERF1-203ENST00000372917 PDLIM2Q96JY6 352 aa13.06□□□□□ -0.32
TRERF1-203ENST00000372917 ANKRD30BQ9BXX2 1392 aa13.05□□□□□ -0.32
TRERF1-203ENST00000372917 CUL7Q14999 1698 aa13.05□□□□□ -0.32
TRERF1-203ENST00000372917 CEP83Q9Y592 693 aa13.05□□□□□ -0.32
TRERF1-203ENST00000372917 NINLQ9Y2I6 1382 aa13.05□□□□□ -0.32
TRERF1-203ENST00000372917 FANCD2Q9BXW9 1451 aa13.05□□□□□ -0.32
TRERF1-203ENST00000372917 MAPK8IP3Q9UPT6 1336 aa13.05□□□□□ -0.32
TRERF1-203ENST00000372917 GTF2F1P35269 517 aaKnown RBP eCLIP13.05□□□□□ -0.32
TRERF1-203ENST00000372917 NOLC1Q14978 699 aaKnown RBP eCLIP13.05□□□□□ -0.32
TRERF1-203ENST00000372917 GOLIM4O00461 696 aa13.05□□□□□ -0.32
TRERF1-203ENST00000372917 C22orf23Q9BZE7 217 aa13.05□□□□□ -0.32
TRERF1-203ENST00000372917 OS9Q13438 667 aaPredicted RBP13.04□□□□□ -0.32
TRERF1-203ENST00000372917 TICAM2Q86XR7 235 aa13.04□□□□□ -0.32
TRERF1-203ENST00000372917 PRIM1P49642 420 aaKnown RBP13.04□□□□□ -0.32
TRERF1-203ENST00000372917 NCAPGQ9BPX3 1015 aa13.04□□□□□ -0.32
TRERF1-203ENST00000372917 RASSF4Q9H2L5 321 aa13.04□□□□□ -0.32
TRERF1-203ENST00000372917 ABCA10Q8WWZ4 1543 aa13.04□□□□□ -0.32
TRERF1-203ENST00000372917 THOC2Q8NI27 1593 aaKnown RBP13.04□□□□□ -0.32
TRERF1-203ENST00000372917 PRDM2Q13029 1718 aa13.04□□□□□ -0.32
TRERF1-203ENST00000372917 WDR43Q15061 677 aaKnown RBP eCLIP13.04□□□□□ -0.32
TRERF1-203ENST00000372917 BRD4O60885 1362 aaPredicted RBP13.03□□□□□ -0.32
TRERF1-203ENST00000372917 UGGT2Q9NYU1 1516 aa13.03□□□□□ -0.32
TRERF1-203ENST00000372917 STK26Q9P289 416 aa13.03□□□□□ -0.32
TRERF1-203ENST00000372917 CTTNBP2Q8WZ74 1663 aa13.03□□□□□ -0.32
TRERF1-203ENST00000372917 DHX16O60231 1041 aaKnown RBP13.03□□□□□ -0.32
TRERF1-203ENST00000372917 IGHDP01880 384 aa13.03□□□□□ -0.32
TRERF1-203ENST00000372917 HNRNPH2P55795 449 aaKnown RBP13.03□□□□□ -0.32
TRERF1-203ENST00000372917 PKD2Q13563 968 aa13.03□□□□□ -0.32
TRERF1-203ENST00000372917 RAD51AP2Q09MP3 1159 aa13.02□□□□□ -0.32
TRERF1-203ENST00000372917 GRIN2BQ13224 1484 aa13.02□□□□□ -0.33
TRERF1-203ENST00000372917 RIOK3O14730 519 aaKnown RBP13.02□□□□□ -0.33
TRERF1-203ENST00000372917 CCDC172P0C7W6 258 aa13.02□□□□□ -0.33
TRERF1-203ENST00000372917 KLHL40Q2TBA0 621 aa13.02□□□□□ -0.33
TRERF1-203ENST00000372917 C10orf67Q8IYJ2 551 aa13.02□□□□□ -0.33
TRERF1-203ENST00000372917 DIAPH3Q9NSV4 1193 aa13.02□□□□□ -0.33
TRERF1-203ENST00000372917 ZSCAN23Q3MJ62 389 aa13.02□□□□□ -0.33
TRERF1-203ENST00000372917 GCC2Q8IWJ2 1684 aa13.02□□□□□ -0.33
TRERF1-203ENST00000372917 TCOF1Q13428 1488 aaKnown RBP13.01□□□□□ -0.33
TRERF1-203ENST00000372917 GYS2P54840 703 aa13.01□□□□□ -0.33
TRERF1-203ENST00000372917 DHX29Q7Z478 1369 aaKnown RBP13.01□□□□□ -0.33
TRERF1-203ENST00000372917 NESP48681 1621 aa13.01□□□□□ -0.33
TRERF1-203ENST00000372917 NLRP13Q86W25 1043 aa13.01□□□□□ -0.33
TRERF1-203ENST00000372917 ICE2Q659A1 982 aa13.01□□□□□ -0.33
TRERF1-203ENST00000372917 ZNF592Q92610 1267 aa13.01□□□□□ -0.33
TRERF1-203ENST00000372917 GOLGA6L6A8MZA4 724 aa13□□□□□ -0.33
TRERF1-203ENST00000372917 BRPF1P55201 1214 aaPredicted RBP13□□□□□ -0.33
TRERF1-203ENST00000372917 MCCP23508 829 aa13□□□□□ -0.33
TRERF1-203ENST00000372917 MCTP1Q6DN14 999 aa13□□□□□ -0.33
TRERF1-203ENST00000372917 DRC1Q96MC2 740 aa13□□□□□ -0.33
TRERF1-203ENST00000372917 SPATA31E1Q6ZUB1 1445 aa13□□□□□ -0.33
TRERF1-203ENST00000372917 KRT222Q8N1A0 295 aa13□□□□□ -0.33
TRERF1-203ENST00000372917 ZNF692Q9BU19 519 aaPredicted RBP13□□□□□ -0.33
TRERF1-203ENST00000372917 SSFA2P28290 1259 aa12.99□□□□□ -0.33
TRERF1-203ENST00000372917 HSP90AB3PQ58FF7 597 aa12.99□□□□□ -0.33
TRERF1-203ENST00000372917 IRF6O14896 467 aa12.99□□□□□ -0.33
TRERF1-203ENST00000372917 NOP2P46087 812 aaKnown RBP12.99□□□□□ -0.33
TRERF1-203ENST00000372917 RAB3GAP1Q15042 981 aa12.99□□□□□ -0.33
TRERF1-203ENST00000372917 POLA1P09884 1462 aaPredicted RBP12.99□□□□□ -0.33
TRERF1-203ENST00000372917 ROCK1Q13464 1354 aa12.99□□□□□ -0.33
TRERF1-203ENST00000372917 DNMBPQ6XZF7 1577 aa12.99□□□□□ -0.33
TRERF1-203ENST00000372917 ZNF445P59923 1031 aa12.98□□□□□ -0.33
TRERF1-203ENST00000372917 ANKRD7Q92527 254 aa12.98□□□□□ -0.33
TRERF1-203ENST00000372917 SLC26A8Q96RN1 970 aa12.98□□□□□ -0.33
TRERF1-203ENST00000372917 TDO2P48775 406 aa12.98□□□□□ -0.33
TRERF1-203ENST00000372917 PIBF1Q8WXW3 757 aa12.98□□□□□ -0.33
TRERF1-203ENST00000372917 TTC12Q9H892 705 aaPredicted RBP12.98□□□□□ -0.33
TRERF1-203ENST00000372917 SATB1Q01826 763 aa12.98□□□□□ -0.33
TRERF1-203ENST00000372917 TEX14Q8IWB6 1497 aa12.98□□□□□ -0.33
TRERF1-203ENST00000372917 RBM27Q9P2N5 1060 aaKnown RBP12.97□□□□□ -0.33
TRERF1-203ENST00000372917 CTNNA3Q9UI47 895 aa12.97□□□□□ -0.33
TRERF1-203ENST00000372917 SEMA3FQ13275 785 aa12.97□□□□□ -0.33
TRERF1-203ENST00000372917 ABCA5Q8WWZ7 1642 aa12.97□□□□□ -0.33
TRERF1-203ENST00000372917 DNAJC21Q5F1R6 531 aaKnown RBP12.97□□□□□ -0.33
TRERF1-203ENST00000372917 DDX41Q9UJV9 622 aaKnown RBP12.97□□□□□ -0.33
TRERF1-203ENST00000372917 CTR9Q6PD62 1173 aa12.96□□□□□ -0.33
TRERF1-203ENST00000372917 NLRP1Q9C000 1473 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms