RNA–Protein interactions for RNA: ENST00000372731.8

SPTAN1-202, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPTAN1, Length 7,889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-202ENST00000372731 WASHC4Q2M389 1173 aa11.11□□□□□ -0.63
SPTAN1-202ENST00000372731 ATP2B2Q01814 1243 aa11.11□□□□□ -0.63
SPTAN1-202ENST00000372731 ZNF428Q96B54 188 aa11.11□□□□□ -0.63
SPTAN1-202ENST00000372731 TIMELESSQ9UNS1 1208 aa11.11□□□□□ -0.63
SPTAN1-202ENST00000372731 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.11□□□□□ -0.63
SPTAN1-202ENST00000372731 ANKRD45Q5TZF3 282 aa11.11□□□□□ -0.63
SPTAN1-202ENST00000372731 CADPSQ9ULU8 1353 aa11.11□□□□□ -0.63
SPTAN1-202ENST00000372731 NEBLO76041 1014 aa11.11□□□□□ -0.63
SPTAN1-202ENST00000372731 CCDC144AA2RUR9 1427 aa11.1□□□□□ -0.63
SPTAN1-202ENST00000372731 STRN4Q9NRL3 753 aa11.1□□□□□ -0.63
SPTAN1-202ENST00000372731 HSP90AB4PQ58FF6 505 aa11.1□□□□□ -0.63
SPTAN1-202ENST00000372731 NEUROD6Q96NK8 337 aa11.1□□□□□ -0.63
SPTAN1-202ENST00000372731 ERC2O15083 957 aa11.1□□□□□ -0.63
SPTAN1-202ENST00000372731 RBM42Q9BTD8 480 aaKnown RBP11.09□□□□□ -0.63
SPTAN1-202ENST00000372731 GOLGA6L3A6NEY3 463 aa11.09□□□□□ -0.63
SPTAN1-202ENST00000372731 KRT18P05783 430 aaKnown RBP11.09□□□□□ -0.63
SPTAN1-202ENST00000372731 PDE3BQ13370 1112 aa11.09□□□□□ -0.63
SPTAN1-202ENST00000372731 ZNF644Q9H582 1327 aaPredicted RBP11.09□□□□□ -0.63
SPTAN1-202ENST00000372731 MIA2Q96PC5 1412 aa11.09□□□□□ -0.63
SPTAN1-202ENST00000372731 FAM177BA6PVY3 158 aa11.08□□□□□ -0.64
SPTAN1-202ENST00000372731 FANCD2Q9BXW9 1451 aa11.08□□□□□ -0.64
SPTAN1-202ENST00000372731 CALRP27797 417 aaKnown RBP11.08□□□□□ -0.64
SPTAN1-202ENST00000372731 RAD54L2Q9Y4B4 1467 aa11.08□□□□□ -0.64
SPTAN1-202ENST00000372731 MATR3P43243 847 aaKnown RBP eCLIP11.08□□□□□ -0.64
SPTAN1-202ENST00000372731 AIMP1Q12904 312 aaKnown RBP11.07□□□□□ -0.64
SPTAN1-202ENST00000372731 ANKRD18AQ8IVF6 992 aa11.07□□□□□ -0.64
SPTAN1-202ENST00000372731 REC8O95072 547 aa11.07□□□□□ -0.64
SPTAN1-202ENST00000372731 TXLNAP40222 546 aa11.07□□□□□ -0.64
SPTAN1-202ENST00000372731 FKBP5Q13451 457 aaPredicted RBP11.07□□□□□ -0.64
SPTAN1-202ENST00000372731 OLFM4Q6UX06 510 aa11.07□□□□□ -0.64
SPTAN1-202ENST00000372731 DDX11L8A8MPP1 907 aa11.06□□□□□ -0.64
SPTAN1-202ENST00000372731 CHMP5Q9NZZ3 219 aa11.06□□□□□ -0.64
SPTAN1-202ENST00000372731 TSPYL4Q9UJ04 414 aa11.06□□□□□ -0.64
SPTAN1-202ENST00000372731 NINLQ9Y2I6 1382 aa11.06□□□□□ -0.64
SPTAN1-202ENST00000372731 PROSER2Q86WR7 435 aaPredicted RBP11.06□□□□□ -0.64
SPTAN1-202ENST00000372731 HOMER1Q86YM7 354 aa11.06□□□□□ -0.64
SPTAN1-202ENST00000372731 BICD2Q8TD16 824 aa11.06□□□□□ -0.64
SPTAN1-202ENST00000372731 IBSPP21815 317 aaPredicted RBP11.06□□□□□ -0.64
SPTAN1-202ENST00000372731 TTLL12Q14166 644 aaPredicted RBP11.06□□□□□ -0.64
SPTAN1-202ENST00000372731 CRBNQ96SW2 442 aa11.05□□□□□ -0.64
SPTAN1-202ENST00000372731 HMOX1P09601 288 aa11.05□□□□□ -0.64
SPTAN1-202ENST00000372731 ESCO1Q5FWF5 840 aa11.05□□□□□ -0.64
SPTAN1-202ENST00000372731 PDCL3Q9H2J4 239 aa11.05□□□□□ -0.64
SPTAN1-202ENST00000372731 TMOD2Q9NZR1 351 aa11.05□□□□□ -0.64
SPTAN1-202ENST00000372731 DIAPH1O60610 1272 aaKnown RBP11.05□□□□□ -0.64
SPTAN1-202ENST00000372731 CNNM1Q9NRU3 951 aa11.05□□□□□ -0.64
SPTAN1-202ENST00000372731 EXOC6Q8TAG9 804 aa11.05□□□□□ -0.64
SPTAN1-202ENST00000372731 PTPRGP23470 1445 aa11.05□□□□□ -0.64
SPTAN1-202ENST00000372731 MAGEC2Q9UBF1 373 aaPredicted RBP11.05□□□□□ -0.64
SPTAN1-202ENST00000372731 ZSCAN29Q8IWY8 852 aaPredicted RBP11.04□□□□□ -0.64
SPTAN1-202ENST00000372731 ERC1Q8IUD2 1116 aa11.04□□□□□ -0.64
SPTAN1-202ENST00000372731 C16orf71Q8IYS4 520 aaPredicted RBP11.04□□□□□ -0.64
SPTAN1-202ENST00000372731 DCTN1Q14203 1278 aa11.04□□□□□ -0.64
SPTAN1-202ENST00000372731 ZKSCAN2Q63HK3 967 aa11.04□□□□□ -0.64
SPTAN1-202ENST00000372731 FOSBP53539 338 aa11.03□□□□□ -0.64
SPTAN1-202ENST00000372731 ACBD3Q9H3P7 528 aa11.03□□□□□ -0.64
SPTAN1-202ENST00000372731 COG6Q9Y2V7 657 aa11.03□□□□□ -0.64
SPTAN1-202ENST00000372731 KIF15Q9NS87 1388 aa11.03□□□□□ -0.64
SPTAN1-202ENST00000372731 ATAD2BQ9ULI0 1458 aa11.03□□□□□ -0.64
SPTAN1-202ENST00000372731 KDM4AO75164 1064 aa11.03□□□□□ -0.64
SPTAN1-202ENST00000372731 TMEM132EQ6IEE7 984 aa11.03□□□□□ -0.64
SPTAN1-202ENST00000372731 CABP2Q9NPB3 220 aa11.03□□□□□ -0.64
SPTAN1-202ENST00000372731 SASS6Q6UVJ0 657 aa11.03□□□□□ -0.64
SPTAN1-202ENST00000372731 ABTB2Q8N961 1025 aa11.03□□□□□ -0.64
SPTAN1-202ENST00000372731 TTC39AQ5SRH9 613 aa11.02□□□□□ -0.64
SPTAN1-202ENST00000372731 DRC1Q96MC2 740 aa11.02□□□□□ -0.64
SPTAN1-202ENST00000372731 DHX57Q6P158 1386 aaKnown RBP11.02□□□□□ -0.64
SPTAN1-202ENST00000372731 MYCNP04198 464 aaPredicted RBP11.02□□□□□ -0.64
SPTAN1-202ENST00000372731 CAGE1Q8TC20 777 aa11.02□□□□□ -0.64
SPTAN1-202ENST00000372731 ZNF592Q92610 1267 aa11.02□□□□□ -0.64
SPTAN1-202ENST00000372731 MYBBP1AQ9BQG0 1328 aaKnown RBP11.02□□□□□ -0.65
SPTAN1-202ENST00000372731 APAF1O14727 1248 aa11.02□□□□□ -0.65
SPTAN1-202ENST00000372731 NEFHP12036 1026 aa11.02□□□□□ -0.65
SPTAN1-202ENST00000372731 TATP17735 454 aaPredicted RBP11.02□□□□□ -0.65
SPTAN1-202ENST00000372731 API5Q9BZZ5 524 aaKnown RBP11.02□□□□□ -0.65
SPTAN1-202ENST00000372731 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.02□□□□□ -0.65
SPTAN1-202ENST00000372731 NAT10Q9H0A0 1025 aaKnown RBP11.02□□□□□ -0.65
SPTAN1-202ENST00000372731 SEPT7Q16181 437 aaKnown RBP11.02□□□□□ -0.65
SPTAN1-202ENST00000372731 TOM1L2Q6ZVM7 507 aa11.02□□□□□ -0.65
SPTAN1-202ENST00000372731 NLRP13Q86W25 1043 aa11.02□□□□□ -0.65
SPTAN1-202ENST00000372731 TEX35Q5T0J7 233 aa11.01□□□□□ -0.65
SPTAN1-202ENST00000372731 CCDC73Q6ZRK6 1079 aa11.01□□□□□ -0.65
SPTAN1-202ENST00000372731 PLEKHO1Q53GL0 409 aaPredicted RBP11.01□□□□□ -0.65
SPTAN1-202ENST00000372731 SMARCA4P51532 1647 aa11.01□□□□□ -0.65
SPTAN1-202ENST00000372731 WDR70Q9NW82 654 aa11.01□□□□□ -0.65
SPTAN1-202ENST00000372731 AQRO60306 1485 aaKnown RBP eCLIP11.01□□□□□ -0.653e-7■■■□□ 18.7
SPTAN1-202ENST00000372731 SCLT1Q96NL6 688 aa11□□□□□ -0.65
SPTAN1-202ENST00000372731 PPP4R3AQ6IN85 833 aa11□□□□□ -0.65
SPTAN1-202ENST00000372731 TSHZ2Q9NRE2 1034 aa11□□□□□ -0.65
SPTAN1-202ENST00000372731 PSMA5P28066 241 aa11□□□□□ -0.65
SPTAN1-202ENST00000372731 CABP4P57796 275 aa11□□□□□ -0.65
SPTAN1-202ENST00000372731 SKOR2Q2VWA4 1001 aaPredicted RBP11□□□□□ -0.65
SPTAN1-202ENST00000372731 CCDC158Q5M9N0 1113 aa11□□□□□ -0.65
SPTAN1-202ENST00000372731 SMC3Q9UQE7 1217 aa11□□□□□ -0.65
SPTAN1-202ENST00000372731 USP47Q96K76 1375 aa11□□□□□ -0.65
SPTAN1-202ENST00000372731 ERLIN2O94905 339 aa11□□□□□ -0.65
SPTAN1-202ENST00000372731 E9PSI1 815 aa11□□□□□ -0.65
SPTAN1-202ENST00000372731 TNIP1Q15025 636 aa10.99□□□□□ -0.65
SPTAN1-202ENST00000372731 ZNF76P36508 570 aa10.99□□□□□ -0.65
SPTAN1-202ENST00000372731 RIPK4P57078 832 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms