RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 ARAP1Q96P48 1450 aa17.12■□□□□ 0.33
RAPGEF1-202ENST00000372190 URB2Q14146 1524 aaKnown RBP17.12■□□□□ 0.33
RAPGEF1-202ENST00000372190 KIF16BQ96L93 1317 aa17.12■□□□□ 0.33
RAPGEF1-202ENST00000372190 UNC13AQ9UPW8 1703 aa17.12■□□□□ 0.33
RAPGEF1-202ENST00000372190 STRN4Q9NRL3 753 aa17.11■□□□□ 0.33
RAPGEF1-202ENST00000372190 TSPYL1Q9H0U9 437 aa17.11■□□□□ 0.33
RAPGEF1-202ENST00000372190 PRXQ9BXM0 1461 aa17.1■□□□□ 0.33
RAPGEF1-202ENST00000372190 MFAP1P55081 439 aaKnown RBP17.1■□□□□ 0.33
RAPGEF1-202ENST00000372190 ERCC4Q92889 916 aaPredicted RBP17.1■□□□□ 0.33
RAPGEF1-202ENST00000372190 MNS1Q8NEH6 495 aa17.1■□□□□ 0.33
RAPGEF1-202ENST00000372190 ELL2O00472 640 aaPredicted RBP17.09■□□□□ 0.33
RAPGEF1-202ENST00000372190 PRAM1Q96QH2 718 aa17.09■□□□□ 0.33
RAPGEF1-202ENST00000372190 SLC26A8Q96RN1 970 aa17.09■□□□□ 0.33
RAPGEF1-202ENST00000372190 GIMAP7Q8NHV1 300 aa17.09■□□□□ 0.33
RAPGEF1-202ENST00000372190 CREBRFQ8IUR6 639 aa17.09■□□□□ 0.33
RAPGEF1-202ENST00000372190 CFAP70Q5T0N1 1121 aa17.08■□□□□ 0.33
RAPGEF1-202ENST00000372190 CDK13Q14004 1512 aaKnown RBP17.08■□□□□ 0.33
RAPGEF1-202ENST00000372190 RRP9O43818 475 aaKnown RBP17.08■□□□□ 0.33
RAPGEF1-202ENST00000372190 HOMER1Q86YM7 354 aa17.08■□□□□ 0.32
RAPGEF1-202ENST00000372190 R3HCC1Q9Y3T6 440 aaKnown RBP17.08■□□□□ 0.32
RAPGEF1-202ENST00000372190 DDX49Q9Y6V7 483 aaKnown RBP17.08■□□□□ 0.32
RAPGEF1-202ENST00000372190 ZNF608Q9ULD9 1512 aaPredicted RBP17.08■□□□□ 0.32
RAPGEF1-202ENST00000372190 CLUAP1Q96AJ1 413 aa17.07■□□□□ 0.32
RAPGEF1-202ENST00000372190 FBXO3Q9UK99 471 aa17.07■□□□□ 0.32
RAPGEF1-202ENST00000372190 BECN2A8MW95 431 aa17.06■□□□□ 0.32
RAPGEF1-202ENST00000372190 TRIM6-TRIM34B2RNG4 842 aa17.06■□□□□ 0.32
RAPGEF1-202ENST00000372190 GGNBP2Q9H3C7 697 aa17.06■□□□□ 0.32
RAPGEF1-202ENST00000372190 PDE3BQ13370 1112 aa17.06■□□□□ 0.32
RAPGEF1-202ENST00000372190 AEBP1Q8IUX7 1158 aa17.06■□□□□ 0.32
RAPGEF1-202ENST00000372190 SUPT6HQ7KZ85 1726 aaKnown RBP17.06■□□□□ 0.32
RAPGEF1-202ENST00000372190 ADGRL1O94910 1474 aa17.06■□□□□ 0.32
RAPGEF1-202ENST00000372190 ARHGEF11O15085 1522 aa17.06■□□□□ 0.32
RAPGEF1-202ENST00000372190 GOLGA6L7A0A1B0GV03 622 aa17.05■□□□□ 0.32
RAPGEF1-202ENST00000372190 EPRSP07814 1512 aaKnown RBP17.05■□□□□ 0.32
RAPGEF1-202ENST00000372190 IPO7O95373 1038 aaKnown RBP17.04■□□□□ 0.32
RAPGEF1-202ENST00000372190 KIAA0754O94854 1291 aa17.04■□□□□ 0.32
RAPGEF1-202ENST00000372190 NECTIN2Q92692 538 aa17.04■□□□□ 0.32
RAPGEF1-202ENST00000372190 SMG6Q86US8 1419 aaKnown RBP17.04■□□□□ 0.32
RAPGEF1-202ENST00000372190 PLB1Q6P1J6 1458 aa17.04■□□□□ 0.32
RAPGEF1-202ENST00000372190 KIF14Q15058 1648 aa17.04■□□□□ 0.32
RAPGEF1-202ENST00000372190 DDX58O95786 925 aaKnown RBP17.04■□□□□ 0.32
RAPGEF1-202ENST00000372190 TPD52L1Q16890 204 aaPredicted RBP17.03■□□□□ 0.32
RAPGEF1-202ENST00000372190 HFM1A2PYH4 1435 aa17.03■□□□□ 0.32
RAPGEF1-202ENST00000372190 FBXW7Q969H0 707 aa17.03■□□□□ 0.32
RAPGEF1-202ENST00000372190 HMOX1P09601 288 aa17.01■□□□□ 0.31
RAPGEF1-202ENST00000372190 RIPK4P57078 832 aa17.01■□□□□ 0.31
RAPGEF1-202ENST00000372190 TOMM22Q9NS69 142 aa17.01■□□□□ 0.31
RAPGEF1-202ENST00000372190 C9orf78Q9NZ63 289 aaPredicted RBP17.01■□□□□ 0.31
RAPGEF1-202ENST00000372190 ERBINQ96RT1 1412 aa17.01■□□□□ 0.31
RAPGEF1-202ENST00000372190 AKNAQ7Z591 1439 aa17.01■□□□□ 0.31
RAPGEF1-202ENST00000372190 NOL10Q9BSC4 688 aaKnown RBP17.01■□□□□ 0.31
RAPGEF1-202ENST00000372190 MAPK8IP2Q13387 824 aaPredicted RBP17■□□□□ 0.31
RAPGEF1-202ENST00000372190 CDK19Q9BWU1 502 aa17■□□□□ 0.31
RAPGEF1-202ENST00000372190 RASSF8Q8NHQ8 419 aa17■□□□□ 0.31
RAPGEF1-202ENST00000372190 PES1O00541 588 aaKnown RBP17■□□□□ 0.31
RAPGEF1-202ENST00000372190 TOM1L2Q6ZVM7 507 aa17■□□□□ 0.31
RAPGEF1-202ENST00000372190 DMRT2Q9Y5R5 561 aa17■□□□□ 0.31
RAPGEF1-202ENST00000372190 DAPK1P53355 1430 aa16.99■□□□□ 0.31
RAPGEF1-202ENST00000372190 RPGRIP1LQ68CZ1 1315 aa16.99■□□□□ 0.31
RAPGEF1-202ENST00000372190 TRIM34Q9BYJ4 488 aa16.99■□□□□ 0.31
RAPGEF1-202ENST00000372190 TSPYL4Q9UJ04 414 aa16.99■□□□□ 0.31
RAPGEF1-202ENST00000372190 FANCIQ9NVI1 1328 aa16.98■□□□□ 0.31
RAPGEF1-202ENST00000372190 VPS37DQ86XT2 251 aa16.98■□□□□ 0.31
RAPGEF1-202ENST00000372190 DENND4BO75064 1496 aaPredicted RBP16.98■□□□□ 0.31
RAPGEF1-202ENST00000372190 CCDC141Q6ZP82 1450 aa16.98■□□□□ 0.31
RAPGEF1-202ENST00000372190 WASHC2AQ641Q2 1341 aa16.98■□□□□ 0.31
RAPGEF1-202ENST00000372190 CCDC39Q9UFE4 941 aa16.98■□□□□ 0.31
RAPGEF1-202ENST00000372190 ST18O60284 1047 aa16.97■□□□□ 0.31
RAPGEF1-202ENST00000372190 HMGN5P82970 282 aaKnown RBP16.97■□□□□ 0.31
RAPGEF1-202ENST00000372190 TATP17735 454 aaPredicted RBP16.97■□□□□ 0.31
RAPGEF1-202ENST00000372190 PDE4AP27815 886 aa16.97■□□□□ 0.31
RAPGEF1-202ENST00000372190 ATP6V1DQ9Y5K8 247 aa16.97■□□□□ 0.31
RAPGEF1-202ENST00000372190 RTEL1-TNFRSF6BF6WH68 1400 aa16.97■□□□□ 0.31
RAPGEF1-202ENST00000372190 RBM33Q96EV2 1170 aaKnown RBP16.97■□□□□ 0.31
RAPGEF1-202ENST00000372190 FOXD4L1Q9NU39 408 aa16.97■□□□□ 0.31
RAPGEF1-202ENST00000372190 SF3A1Q15459 793 aaKnown RBP16.97■□□□□ 0.31
RAPGEF1-202ENST00000372190 PLEKHO1Q53GL0 409 aaPredicted RBP16.97■□□□□ 0.31
RAPGEF1-202ENST00000372190 RBM42Q9BTD8 480 aaKnown RBP16.97■□□□□ 0.31
RAPGEF1-202ENST00000372190 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.97■□□□□ 0.31
RAPGEF1-202ENST00000372190 UBE2Q2Q8WVN8 375 aa16.96■□□□□ 0.31
RAPGEF1-202ENST00000372190 E9PSI1 815 aa16.96■□□□□ 0.31
RAPGEF1-202ENST00000372190 CENPQQ7L2Z9 268 aaPredicted RBP16.96■□□□□ 0.31
RAPGEF1-202ENST00000372190 IFT57Q9NWB7 429 aa16.96■□□□□ 0.31
RAPGEF1-202ENST00000372190 ZNF692Q9BU19 519 aaPredicted RBP16.96■□□□□ 0.31
RAPGEF1-202ENST00000372190 PEG3Q9GZU2 1588 aa16.95■□□□□ 0.3
RAPGEF1-202ENST00000372190 FAM161AQ3B820 660 aa16.95■□□□□ 0.3
RAPGEF1-202ENST00000372190 TIAM1Q13009 1591 aa16.95■□□□□ 0.3
RAPGEF1-202ENST00000372190 CEBPAP49715 358 aaPredicted RBP16.95■□□□□ 0.3
RAPGEF1-202ENST00000372190 PRDM11Q9NQV5 511 aa16.95■□□□□ 0.3
RAPGEF1-202ENST00000372190 PPP1R1BQ9UD71 204 aaPredicted RBP16.95■□□□□ 0.3
RAPGEF1-202ENST00000372190 KIAA1107Q9UPP5 1409 aa16.94■□□□□ 0.3
RAPGEF1-202ENST00000372190 AMOTL1Q8IY63 956 aa16.94■□□□□ 0.3
RAPGEF1-202ENST00000372190 BCL2L13Q9BXK5 485 aa16.94■□□□□ 0.3
RAPGEF1-202ENST00000372190 XPCQ01831 940 aaPredicted RBP16.94■□□□□ 0.3
RAPGEF1-202ENST00000372190 APAF1O14727 1248 aa16.94■□□□□ 0.3
RAPGEF1-202ENST00000372190 RBM10P98175 930 aaKnown RBP16.93■□□□□ 0.3
RAPGEF1-202ENST00000372190 RUNDC1Q96C34 613 aa16.93■□□□□ 0.3
RAPGEF1-202ENST00000372190 RIC3Q7Z5B4 369 aa16.93■□□□□ 0.3
RAPGEF1-202ENST00000372190 TEX14Q8IWB6 1497 aa16.92■□□□□ 0.3
RAPGEF1-202ENST00000372190 FKBP5Q13451 457 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms