RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 SLC26A8Q96RN1 970 aa22.93■■□□□ 1.26
PHGDH-202ENST00000369409 MRS2Q9HD23 443 aa22.93■■□□□ 1.26
PHGDH-202ENST00000369409 RALBP1Q15311 655 aa22.92■■□□□ 1.26
PHGDH-202ENST00000369409 FAM135BQ49AJ0 1406 aa22.92■■□□□ 1.26
PHGDH-202ENST00000369409 CC2D1BQ5T0F9 858 aaKnown RBP22.92■■□□□ 1.26
PHGDH-202ENST00000369409 CABP2Q9NPB3 220 aa22.92■■□□□ 1.26
PHGDH-202ENST00000369409 KNSTRNQ9Y448 316 aa22.92■■□□□ 1.26
PHGDH-202ENST00000369409 PUS7Q96PZ0 661 aaKnown RBP22.91■■□□□ 1.26
PHGDH-202ENST00000369409 TMC1Q8TDI8 760 aa22.9■■□□□ 1.26
PHGDH-202ENST00000369409 PTPRUQ92729 1446 aa22.9■■□□□ 1.26
PHGDH-202ENST00000369409 SRPK2P78362 688 aaKnown RBP22.9■■□□□ 1.26
PHGDH-202ENST00000369409 MYBBP1AQ9BQG0 1328 aaKnown RBP22.9■■□□□ 1.26
PHGDH-202ENST00000369409 XRN1Q8IZH2 1706 aaKnown RBP22.88■■□□□ 1.25
PHGDH-202ENST00000369409 ROBO2Q9HCK4 1378 aa22.88■■□□□ 1.25
PHGDH-202ENST00000369409 SLC12A5Q9H2X9 1139 aa22.88■■□□□ 1.25
PHGDH-202ENST00000369409 ATAD2Q6PL18 1390 aa22.87■■□□□ 1.25
PHGDH-202ENST00000369409 TBX22Q9Y458 520 aa22.87■■□□□ 1.25
PHGDH-202ENST00000369409 USP32Q8NFA0 1604 aa22.87■■□□□ 1.25
PHGDH-202ENST00000369409 AMER1Q5JTC6 1135 aaPredicted RBP22.86■■□□□ 1.25
PHGDH-202ENST00000369409 SIRT1Q96EB6 747 aa22.85■■□□□ 1.25
PHGDH-202ENST00000369409 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.85■■□□□ 1.25
PHGDH-202ENST00000369409 NSD3Q9BZ95 1437 aa22.85■■□□□ 1.25
PHGDH-202ENST00000369409 ANKLE2Q86XL3 938 aa22.85■■□□□ 1.25
PHGDH-202ENST00000369409 CARD14Q9BXL6 1004 aa22.85■■□□□ 1.25
PHGDH-202ENST00000369409 ADGRB2O60241 1585 aa22.84■■□□□ 1.25
PHGDH-202ENST00000369409 NINLQ9Y2I6 1382 aa22.84■■□□□ 1.25
PHGDH-202ENST00000369409 CDK19Q9BWU1 502 aa22.84■■□□□ 1.25
PHGDH-202ENST00000369409 NPC1L1Q9UHC9 1359 aa22.84■■□□□ 1.25
PHGDH-202ENST00000369409 ANKRD36BQ8N2N9 1353 aa22.83■■□□□ 1.25
PHGDH-202ENST00000369409 BRD4O60885 1362 aaPredicted RBP22.83■■□□□ 1.24
PHGDH-202ENST00000369409 PTCH1Q13635 1447 aa22.82■■□□□ 1.24
PHGDH-202ENST00000369409 CHD2O14647 1828 aaKnown RBP22.81■■□□□ 1.24
PHGDH-202ENST00000369409 FAM9BQ8IZU0 186 aa22.8■■□□□ 1.24
PHGDH-202ENST00000369409 AMOTL2Q9Y2J4 779 aa22.8■■□□□ 1.24
PHGDH-202ENST00000369409 NLRP13Q86W25 1043 aa22.79■■□□□ 1.24
PHGDH-202ENST00000369409 PIK3R4Q99570 1358 aa22.79■■□□□ 1.24
PHGDH-202ENST00000369409 A0A1W2PP64 1363 aa22.78■■□□□ 1.24
PHGDH-202ENST00000369409 CD163L1Q9NR16 1453 aa22.78■■□□□ 1.24
PHGDH-202ENST00000369409 WASLO00401 505 aaPredicted RBP22.77■■□□□ 1.24
PHGDH-202ENST00000369409 NPHP4O75161 1426 aaPredicted RBP22.77■■□□□ 1.24
PHGDH-202ENST00000369409 TOPAZ1Q8N9V7 1692 aa22.74■■□□□ 1.23
PHGDH-202ENST00000369409 ITSN1Q15811 1721 aa22.74■■□□□ 1.23
PHGDH-202ENST00000369409 ATP7BP35670 1465 aa22.74■■□□□ 1.23
PHGDH-202ENST00000369409 ANKRD26Q9UPS8 1709 aa22.73■■□□□ 1.23
PHGDH-202ENST00000369409 KIF20BQ96Q89 1820 aa22.73■■□□□ 1.23
PHGDH-202ENST00000369409 HNRNPUQ00839 825 aaKnown RBP eCLIP22.73■■□□□ 1.23
PHGDH-202ENST00000369409 PPIP5K1Q6PFW1 1433 aa22.71■■□□□ 1.23
PHGDH-202ENST00000369409 CGNL1Q0VF96 1302 aa22.71■■□□□ 1.23
PHGDH-202ENST00000369409 PPP2R1AP30153 589 aa22.71■■□□□ 1.23
PHGDH-202ENST00000369409 PNISRQ8TF01 805 aaKnown RBP22.71■■□□□ 1.23
PHGDH-202ENST00000369409 TERF2IPQ9NYB0 399 aa22.71■■□□□ 1.23
PHGDH-202ENST00000369409 AKAP12Q02952 1782 aa22.71■■□□□ 1.23
PHGDH-202ENST00000369409 KCNA6P17658 529 aa22.71■■□□□ 1.23
PHGDH-202ENST00000369409 CABP1Q9NZU7 370 aa22.71■■□□□ 1.23
PHGDH-202ENST00000369409 CDC42BPGQ6DT37 1551 aa22.7■■□□□ 1.22
PHGDH-202ENST00000369409 NCKAP5LQ9HCH0 1330 aa22.7■■□□□ 1.22
PHGDH-202ENST00000369409 KDM4FA0A1W2PPD8 638 aa22.7■■□□□ 1.22
PHGDH-202ENST00000369409 MON2Q7Z3U7 1717 aa22.7■■□□□ 1.22
PHGDH-202ENST00000369409 NALCNQ8IZF0 1738 aa22.69■■□□□ 1.22
PHGDH-202ENST00000369409 HDGFL2Q7Z4V5 671 aaPredicted RBP22.68■■□□□ 1.22
PHGDH-202ENST00000369409 NUDT16Q96DE0 195 aaKnown RBP22.68■■□□□ 1.22
PHGDH-202ENST00000369409 NSD2O96028 1365 aa22.67■■□□□ 1.22
PHGDH-202ENST00000369409 PRR36Q9H6K5 1346 aa22.67■■□□□ 1.22
PHGDH-202ENST00000369409 RGPD8O14715 1765 aaPredicted RBP22.66■■□□□ 1.22
PHGDH-202ENST00000369409 NWD1Q149M9 1564 aa22.66■■□□□ 1.22
PHGDH-202ENST00000369409 FMN2Q9NZ56 1722 aa22.65■■□□□ 1.22
PHGDH-202ENST00000369409 MORC1Q86VD1 984 aa22.64■■□□□ 1.21
PHGDH-202ENST00000369409 CPSF1Q10570 1443 aaKnown RBP22.63■■□□□ 1.21
PHGDH-202ENST00000369409 CCDC61Q9Y6R9 512 aa22.63■■□□□ 1.21
PHGDH-202ENST00000369409 NKTRP30414 1462 aaKnown RBP22.61■■□□□ 1.21
PHGDH-202ENST00000369409 LMTK3Q96Q04 1460 aa22.61■■□□□ 1.21
PHGDH-202ENST00000369409 NUTM2FA1L443 756 aa22.6■■□□□ 1.21
PHGDH-202ENST00000369409 NRKQ7Z2Y5 1582 aa22.6■■□□□ 1.21
PHGDH-202ENST00000369409 EDC4Q6P2E9 1401 aaKnown RBP22.59■■□□□ 1.21
PHGDH-202ENST00000369409 TNNT2P45379 298 aaPredicted RBP22.59■■□□□ 1.21
PHGDH-202ENST00000369409 HSPA2P54652 639 aa22.58■■□□□ 1.21
PHGDH-202ENST00000369409 GGNBP2Q9H3C7 697 aa22.58■■□□□ 1.2
PHGDH-202ENST00000369409 ZBED9Q6R2W3 1325 aa22.56■■□□□ 1.2
PHGDH-202ENST00000369409 FYB1O15117 783 aa22.56■■□□□ 1.2
PHGDH-202ENST00000369409 SHPRHQ149N8 1683 aa22.55■■□□□ 1.2
PHGDH-202ENST00000369409 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.55■■□□□ 1.2
PHGDH-202ENST00000369409 ADGRL3Q9HAR2 1447 aa22.55■■□□□ 1.2
PHGDH-202ENST00000369409 STRCP1A6NGW2 1772 aa22.54■■□□□ 1.2
PHGDH-202ENST00000369409 STRCQ7RTU9 1775 aa22.54■■□□□ 1.2
PHGDH-202ENST00000369409 ANKARQ7Z5J8 1434 aa22.54■■□□□ 1.2
PHGDH-202ENST00000369409 BLMP54132 1417 aaPredicted RBP22.54■■□□□ 1.2
PHGDH-202ENST00000369409 RBM33Q96EV2 1170 aaKnown RBP22.53■■□□□ 1.2
PHGDH-202ENST00000369409 POLR3AO14802 1390 aaPredicted RBP22.52■■□□□ 1.2
PHGDH-202ENST00000369409 WDR43Q15061 677 aaKnown RBP eCLIP22.51■■□□□ 1.19
PHGDH-202ENST00000369409 INSRP06213 1382 aa22.51■■□□□ 1.19
PHGDH-202ENST00000369409 ACEP12821 1306 aa22.51■■□□□ 1.19
PHGDH-202ENST00000369409 PLEKHG3A1L390 1219 aa22.51■■□□□ 1.19
PHGDH-202ENST00000369409 SENP3-EIF4A1A0A087X0R7 540 aa22.49■■□□□ 1.19
PHGDH-202ENST00000369409 ZNF692Q9BU19 519 aaPredicted RBP22.49■■□□□ 1.19
PHGDH-202ENST00000369409 USP6P35125 1406 aa22.49■■□□□ 1.19
PHGDH-202ENST00000369409 ADAMTS8Q9UP79 889 aa22.47■■□□□ 1.19
PHGDH-202ENST00000369409 MAP2P11137 1827 aaKnown RBP22.47■■□□□ 1.19
PHGDH-202ENST00000369409 SCAF1Q9H7N4 1312 aaKnown RBP22.47■■□□□ 1.19
PHGDH-202ENST00000369409 MTHFSP49914 203 aa22.47■■□□□ 1.19
PHGDH-202ENST00000369409 NME9Q86XW9 330 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms