RNA–Protein interactions for RNA: ENST00000362576.1

RNU6-543P-201, Transcript of RNA, U6 small nuclear 543, pseudogene, humanhuman

BASIC

Gene RNU6-543P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-543P-201ENST00000362576 ZBTB7CA1YPR0 619 aa8.41□□□□□ -1.06
RNU6-543P-201ENST00000362576 IFFO2Q5TF58 517 aa8.41□□□□□ -1.06
RNU6-543P-201ENST00000362576 PRPF38BQ5VTL8 546 aaKnown RBP8.41□□□□□ -1.06
RNU6-543P-201ENST00000362576 TSC1Q92574 1164 aa8.41□□□□□ -1.06
RNU6-543P-201ENST00000362576 CALR3Q96L12 384 aaKnown RBP8.41□□□□□ -1.06
RNU6-543P-201ENST00000362576 USP17L8P0C7I0 530 aa8.4□□□□□ -1.06
RNU6-543P-201ENST00000362576 HRCP23327 699 aa8.4□□□□□ -1.06
RNU6-543P-201ENST00000362576 SWT1Q5T5J6 900 aaKnown RBP8.4□□□□□ -1.06
RNU6-543P-201ENST00000362576 HOXA2O43364 376 aa8.39□□□□□ -1.07
RNU6-543P-201ENST00000362576 GRIPAP1Q4V328 841 aa8.39□□□□□ -1.07
RNU6-543P-201ENST00000362576 ZBED2Q9BTP6 218 aa8.39□□□□□ -1.07
RNU6-543P-201ENST00000362576 SEPT9Q9UHD8 586 aaPredicted RBP8.39□□□□□ -1.07
RNU6-543P-201ENST00000362576 HELBQ8NG08 1087 aaPredicted RBP8.38□□□□□ -1.07
RNU6-543P-201ENST00000362576 RABGEF1Q9UJ41 708 aa8.38□□□□□ -1.07
RNU6-543P-201ENST00000362576 TBC1D2BQ9UPU7 963 aa8.38□□□□□ -1.07
RNU6-543P-201ENST00000362576 RNF40O75150 1001 aa8.37□□□□□ -1.07
RNU6-543P-201ENST00000362576 C6orf229H3BNL8 230 aa8.36□□□□□ -1.07
RNU6-543P-201ENST00000362576 SLC10A3P09131 477 aa8.36□□□□□ -1.07
RNU6-543P-201ENST00000362576 GUCA2AQ02747 115 aa8.36□□□□□ -1.07
RNU6-543P-201ENST00000362576 MTMR2Q13614 643 aa8.36□□□□□ -1.07
RNU6-543P-201ENST00000362576 THSD4Q6ZMP0 1018 aa8.36□□□□□ -1.07
RNU6-543P-201ENST00000362576 SLF2Q8IX21 1173 aa8.36□□□□□ -1.07
RNU6-543P-201ENST00000362576 NDUFB9Q9Y6M9 179 aa8.36□□□□□ -1.07
RNU6-543P-201ENST00000362576 ACIN1Q9UKV3 1341 aaKnown RBP8.35□□□□□ -1.07
RNU6-543P-201ENST00000362576 SOCS7O14512 581 aa8.35□□□□□ -1.07
RNU6-543P-201ENST00000362576 CTDSPL2Q05D32 466 aa8.34□□□□□ -1.07
RNU6-543P-201ENST00000362576 FAM98CQ17RN3 349 aaKnown RBP8.34□□□□□ -1.07
RNU6-543P-201ENST00000362576 PCDHGC3Q9UN70 934 aa8.34□□□□□ -1.07
RNU6-543P-201ENST00000362576 RGS20O76081 388 aa8.33□□□□□ -1.08
RNU6-543P-201ENST00000362576 GLMNQ92990 594 aa8.33□□□□□ -1.08
RNU6-543P-201ENST00000362576 HLA-CQ95604 372 aa8.33□□□□□ -1.08
RNU6-543P-201ENST00000362576 POM121CA8CG34 1229 aa8.32□□□□□ -1.08
RNU6-543P-201ENST00000362576 CFHP08603 1231 aa8.32□□□□□ -1.08
RNU6-543P-201ENST00000362576 FUT2Q10981 343 aa8.32□□□□□ -1.08
RNU6-543P-201ENST00000362576 WASHC4Q2M389 1173 aa8.32□□□□□ -1.08
RNU6-543P-201ENST00000362576 SAMD7Q7Z3H4 446 aa8.32□□□□□ -1.08
RNU6-543P-201ENST00000362576 ATP6V1AP38606 617 aa8.31□□□□□ -1.08
RNU6-543P-201ENST00000362576 HDGFL1Q5TGJ6 251 aa8.31□□□□□ -1.08
RNU6-543P-201ENST00000362576 NBPF3Q9H094 633 aa8.31□□□□□ -1.08
RNU6-543P-201ENST00000362576 KMT5BQ4FZB7 885 aa8.3□□□□□ -1.08
RNU6-543P-201ENST00000362576 STAC3Q96MF2 364 aa8.3□□□□□ -1.08
RNU6-543P-201ENST00000362576 A0A0G2JS52 829 aa8.29□□□□□ -1.08
RNU6-543P-201ENST00000362576 PPP1R15AO75807 674 aaPredicted RBP8.29□□□□□ -1.08
RNU6-543P-201ENST00000362576 PTPN5P54829 565 aa8.29□□□□□ -1.08
RNU6-543P-201ENST00000362576 AEBP1Q8IUX7 1158 aa8.29□□□□□ -1.08
RNU6-543P-201ENST00000362576 LRRN4Q8WUT4 740 aa8.29□□□□□ -1.08
RNU6-543P-201ENST00000362576 LAPTM4BQ86VI4 370 aa8.28□□□□□ -1.08
RNU6-543P-201ENST00000362576 GJD4Q96KN9 370 aaPredicted RBP8.28□□□□□ -1.08
RNU6-543P-201ENST00000362576 HMX1Q9NP08 348 aaPredicted RBP8.28□□□□□ -1.08
RNU6-543P-201ENST00000362576 CFAP99D6REC4 459 aa8.27□□□□□ -1.09
RNU6-543P-201ENST00000362576 RFX1P22670 979 aa8.27□□□□□ -1.09
RNU6-543P-201ENST00000362576 RANGAP1P46060 587 aaPredicted RBP8.27□□□□□ -1.09
RNU6-543P-201ENST00000362576 VAC14Q08AM6 782 aa8.27□□□□□ -1.09
RNU6-543P-201ENST00000362576 KCTD17Q8N5Z5 321 aa8.27□□□□□ -1.09
RNU6-543P-201ENST00000362576 PRR7Q8TB68 274 aa8.27□□□□□ -1.09
RNU6-543P-201ENST00000362576 NECTIN2Q92692 538 aa8.27□□□□□ -1.09
RNU6-543P-201ENST00000362576 SYMPKQ92797 1274 aaKnown RBP8.27□□□□□ -1.09
RNU6-543P-201ENST00000362576 TRAIPQ9BWF2 469 aa8.27□□□□□ -1.09
RNU6-543P-201ENST00000362576 PDE4CQ08493 712 aa8.26□□□□□ -1.09
RNU6-543P-201ENST00000362576 IRF5Q13568 498 aa8.26□□□□□ -1.09
RNU6-543P-201ENST00000362576 MRPL50Q8N5N7 158 aaKnown RBP8.26□□□□□ -1.09
RNU6-543P-201ENST00000362576 RETREG2Q8NC44 543 aa8.26□□□□□ -1.09
RNU6-543P-201ENST00000362576 PNMA1Q8ND90 353 aa8.26□□□□□ -1.09
RNU6-543P-201ENST00000362576 WNT2BQ93097 391 aa8.26□□□□□ -1.09
RNU6-543P-201ENST00000362576 Q3C1V9 767 aa8.25□□□□□ -1.09
RNU6-543P-201ENST00000362576 ZFRQ96KR1 1074 aaKnown RBP8.25□□□□□ -1.09
RNU6-543P-201ENST00000362576 TRIM34Q9BYJ4 488 aa8.25□□□□□ -1.09
RNU6-543P-201ENST00000362576 ITGBL1O95965 494 aaPredicted RBP8.24□□□□□ -1.09
RNU6-543P-201ENST00000362576 LRCH3Q96II8 777 aa8.24□□□□□ -1.09
RNU6-543P-201ENST00000362576 CCDC9Q9Y3X0 531 aaKnown RBP8.24□□□□□ -1.09
RNU6-543P-201ENST00000362576 GOLGA8CPA6NN73 597 aa8.23□□□□□ -1.09
RNU6-543P-201ENST00000362576 NR6A1Q15406 480 aa8.23□□□□□ -1.09
RNU6-543P-201ENST00000362576 PUS10Q3MIT2 529 aaKnown RBP8.23□□□□□ -1.09
RNU6-543P-201ENST00000362576 SEMA3FQ13275 785 aa8.22□□□□□ -1.09
RNU6-543P-201ENST00000362576 RETREG3Q86VR2 466 aa8.22□□□□□ -1.09
RNU6-543P-201ENST00000362576 EPS8L1Q8TE68 723 aa8.22□□□□□ -1.09
RNU6-543P-201ENST00000362576 PRR14Q9BWN1 585 aa8.22□□□□□ -1.09
RNU6-543P-201ENST00000362576 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.22□□□□□ -1.09
RNU6-543P-201ENST00000362576 PBXIP1Q96AQ6 731 aa8.21□□□□□ -1.1
RNU6-543P-201ENST00000362576 ACTN4O43707 911 aaKnown RBP8.2□□□□□ -1.1
RNU6-543P-201ENST00000362576 MORN1Q5T089 497 aa8.2□□□□□ -1.1
RNU6-543P-201ENST00000362576 SLC27A5Q9Y2P5 690 aa8.2□□□□□ -1.1
RNU6-543P-201ENST00000362576 PER1O15534 1290 aaPredicted RBP8.19□□□□□ -1.1
RNU6-543P-201ENST00000362576 CSB-PGBD3P0DP91 1061 aa8.19□□□□□ -1.1
RNU6-543P-201ENST00000362576 LMOD1P29536 600 aaPredicted RBP8.19□□□□□ -1.1
RNU6-543P-201ENST00000362576 SOX11P35716 441 aa8.19□□□□□ -1.1
RNU6-543P-201ENST00000362576 PPP4CP60510 307 aa8.19□□□□□ -1.1
RNU6-543P-201ENST00000362576 ADAMTS19Q8TE59 1207 aa8.19□□□□□ -1.1
RNU6-543P-201ENST00000362576 PPP1R12CQ9BZL4 782 aa8.19□□□□□ -1.1
RNU6-543P-201ENST00000362576 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.18□□□□□ -1.1
RNU6-543P-201ENST00000362576 EIF4G2P78344 907 aaKnown RBP eCLIP8.18□□□□□ -1.1
RNU6-543P-201ENST00000362576 ANKK1Q8NFD2 765 aa8.18□□□□□ -1.1
RNU6-543P-201ENST00000362576 SOWAHBA6NEL2 793 aa8.17□□□□□ -1.1
RNU6-543P-201ENST00000362576 NPM2Q86SE8 214 aaKnown RBP8.17□□□□□ -1.1
RNU6-543P-201ENST00000362576 ALG2Q9H553 416 aa8.17□□□□□ -1.1
RNU6-543P-201ENST00000362576 TFIP11Q9UBB9 837 aaKnown RBP8.17□□□□□ -1.1
RNU6-543P-201ENST00000362576 PALM3A6NDB9 673 aaPredicted RBP8.16□□□□□ -1.1
RNU6-543P-201ENST00000362576 DESI1Q6ICB0 168 aa8.16□□□□□ -1.1
RNU6-543P-201ENST00000362576 USB1Q9BQ65 265 aaKnown RBP8.16□□□□□ -1.1
RNU6-543P-201ENST00000362576 IRX2Q9BZI1 471 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms