RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 CALR3Q96L12 384 aaKnown RBP9.05□□□□□ -0.96
RPL39-201ENST00000361575 ST18O60284 1047 aa9.04□□□□□ -0.96
RPL39-201ENST00000361575 SLF2Q8IX21 1173 aa9.04□□□□□ -0.96
RPL39-201ENST00000361575 RETREG2Q8NC44 543 aa9.04□□□□□ -0.96
RPL39-201ENST00000361575 TRAIPQ9BWF2 469 aa9.04□□□□□ -0.96
RPL39-201ENST00000361575 PRM3Q9NNZ6 103 aa9.04□□□□□ -0.96
RPL39-201ENST00000361575 PBX2P40425 430 aa9.03□□□□□ -0.96
RPL39-201ENST00000361575 POTEB3A0JP26 581 aa9.02□□□□□ -0.97
RPL39-201ENST00000361575 C6orf229H3BNL8 230 aa9.02□□□□□ -0.97
RPL39-201ENST00000361575 POTEBQ6S5H4 581 aa9.02□□□□□ -0.97
RPL39-201ENST00000361575 LAPTM4BQ86VI4 370 aa9.02□□□□□ -0.97
RPL39-201ENST00000361575 WWC1Q8IX03 1113 aa9.02□□□□□ -0.97
RPL39-201ENST00000361575 HELBQ8NG08 1087 aaPredicted RBP9.02□□□□□ -0.97
RPL39-201ENST00000361575 MARVELD3Q96A59 401 aa9.02□□□□□ -0.97
RPL39-201ENST00000361575 PER1O15534 1290 aaPredicted RBP9.01□□□□□ -0.97
RPL39-201ENST00000361575 ATP6V1AP38606 617 aa9.01□□□□□ -0.97
RPL39-201ENST00000361575 ZNF687Q8N1G0 1237 aa9.01□□□□□ -0.97
RPL39-201ENST00000361575 TSC1Q92574 1164 aa9.01□□□□□ -0.97
RPL39-201ENST00000361575 ZFRQ96KR1 1074 aaKnown RBP9.01□□□□□ -0.97
RPL39-201ENST00000361575 VAC14Q08AM6 782 aa9□□□□□ -0.97
RPL39-201ENST00000361575 HDGFL1Q5TGJ6 251 aa9□□□□□ -0.97
RPL39-201ENST00000361575 PRR7Q8TB68 274 aa9□□□□□ -0.97
RPL39-201ENST00000361575 HDGFP51858 240 aaKnown RBP8.99□□□□□ -0.97
RPL39-201ENST00000361575 EMP3P54852 163 aa8.99□□□□□ -0.97
RPL39-201ENST00000361575 MORN1Q5T089 497 aa8.99□□□□□ -0.97
RPL39-201ENST00000361575 RNF40O75150 1001 aa8.98□□□□□ -0.97
RPL39-201ENST00000361575 SRPK2P78362 688 aaKnown RBP8.98□□□□□ -0.97
RPL39-201ENST00000361575 NR6A1Q15406 480 aa8.98□□□□□ -0.97
RPL39-201ENST00000361575 WASHC4Q2M389 1173 aa8.98□□□□□ -0.97
RPL39-201ENST00000361575 PUS10Q3MIT2 529 aaKnown RBP8.98□□□□□ -0.97
RPL39-201ENST00000361575 GRIPAP1Q4V328 841 aa8.98□□□□□ -0.97
RPL39-201ENST00000361575 CFAP70Q5T0N1 1121 aa8.98□□□□□ -0.97
RPL39-201ENST00000361575 ALG2Q9H553 416 aa8.98□□□□□ -0.97
RPL39-201ENST00000361575 NBPF3Q9H094 633 aa8.97□□□□□ -0.97
RPL39-201ENST00000361575 SLC27A5Q9Y2P5 690 aa8.97□□□□□ -0.97
RPL39-201ENST00000361575 FAM205CA6NFA0 338 aa8.96□□□□□ -0.98
RPL39-201ENST00000361575 TK2O00142 265 aa8.96□□□□□ -0.98
RPL39-201ENST00000361575 PPP1R15AO75807 674 aaPredicted RBP8.96□□□□□ -0.98
RPL39-201ENST00000361575 UCN2Q96RP3 112 aa8.96□□□□□ -0.98
RPL39-201ENST00000361575 ACTN4O43707 911 aaKnown RBP8.95□□□□□ -0.98
RPL39-201ENST00000361575 SLC4A3P48751 1232 aa8.95□□□□□ -0.98
RPL39-201ENST00000361575 RETREG3Q86VR2 466 aa8.95□□□□□ -0.98
RPL39-201ENST00000361575 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.94□□□□□ -0.98
RPL39-201ENST00000361575 ZBTB7CA1YPR0 619 aa8.94□□□□□ -0.98
RPL39-201ENST00000361575 HRO43593 1189 aa8.94□□□□□ -0.98
RPL39-201ENST00000361575 KMT5BQ4FZB7 885 aa8.94□□□□□ -0.98
RPL39-201ENST00000361575 BLOC1S3Q6QNY0 202 aa8.94□□□□□ -0.98
RPL39-201ENST00000361575 RNF19BQ6ZMZ0 732 aa8.94□□□□□ -0.98
RPL39-201ENST00000361575 LHX8Q68G74 356 aa8.93□□□□□ -0.98
RPL39-201ENST00000361575 DESI1Q6ICB0 168 aa8.93□□□□□ -0.98
RPL39-201ENST00000361575 HS3ST6Q96QI5 342 aa8.93□□□□□ -0.98
RPL39-201ENST00000361575 PPP1R12CQ9BZL4 782 aa8.93□□□□□ -0.98
RPL39-201ENST00000361575 ADGRD1Q6QNK2 874 aa8.92□□□□□ -0.98
RPL39-201ENST00000361575 MRPL50Q8N5N7 158 aaKnown RBP8.92□□□□□ -0.98
RPL39-201ENST00000361575 PBXIP1Q96AQ6 731 aa8.92□□□□□ -0.98
RPL39-201ENST00000361575 LRCH3Q96II8 777 aa8.92□□□□□ -0.98
RPL39-201ENST00000361575 LSM11P83369 360 aaKnown RBP eCLIP8.91□□□□□ -0.98
RPL39-201ENST00000361575 LYPD8Q6UX82 237 aa8.91□□□□□ -0.98
RPL39-201ENST00000361575 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.91□□□□□ -0.98
RPL39-201ENST00000361575 PALM3A6NDB9 673 aaPredicted RBP8.9□□□□□ -0.98
RPL39-201ENST00000361575 RFX1P22670 979 aa8.9□□□□□ -0.98
RPL39-201ENST00000361575 APLP1P51693 650 aa8.9□□□□□ -0.98
RPL39-201ENST00000361575 LCE2DQ5TA82 110 aaPredicted RBP8.9□□□□□ -0.98
RPL39-201ENST00000361575 Q3C1V9 767 aa8.89□□□□□ -0.99
RPL39-201ENST00000361575 BRICD5Q6PL45 260 aa8.89□□□□□ -0.99
RPL39-201ENST00000361575 KCTD17Q8N5Z5 321 aa8.89□□□□□ -0.99
RPL39-201ENST00000361575 THAP11Q96EK4 314 aa8.89□□□□□ -0.99
RPL39-201ENST00000361575 F12P00748 615 aaPredicted RBP8.88□□□□□ -0.99
RPL39-201ENST00000361575 AEBP1Q8IUX7 1158 aa8.88□□□□□ -0.99
RPL39-201ENST00000361575 BCAMP50895 628 aa8.87□□□□□ -0.99
RPL39-201ENST00000361575 USB1Q9BQ65 265 aaKnown RBP8.87□□□□□ -0.99
RPL39-201ENST00000361575 TFIP11Q9UBB9 837 aaKnown RBP8.87□□□□□ -0.99
RPL39-201ENST00000361575 SALL2Q9Y467 1007 aaPredicted RBP8.87□□□□□ -0.99
RPL39-201ENST00000361575 CARNS1A5YM72 827 aa8.86□□□□□ -0.99
RPL39-201ENST00000361575 SOWAHBA6NEL2 793 aa8.86□□□□□ -0.99
RPL39-201ENST00000361575 FBXO45P0C2W1 286 aa8.86□□□□□ -0.99
RPL39-201ENST00000361575 SOX11P35716 441 aa8.86□□□□□ -0.99
RPL39-201ENST00000361575 ACIN1Q9UKV3 1341 aaKnown RBP8.85□□□□□ -0.99
RPL39-201ENST00000361575 LMOD1P29536 600 aaPredicted RBP8.85□□□□□ -0.99
RPL39-201ENST00000361575 TBC1D9Q6ZT07 1266 aa8.85□□□□□ -0.99
RPL39-201ENST00000361575 SCUBE3Q8IX30 993 aa8.85□□□□□ -0.99
RPL39-201ENST00000361575 MAP10Q9P2G4 905 aa8.85□□□□□ -0.99
RPL39-201ENST00000361575 HPS5Q9UPZ3 1129 aa8.85□□□□□ -0.99
RPL39-201ENST00000361575 MAFBQ9Y5Q3 323 aaPredicted RBP8.85□□□□□ -0.99
RPL39-201ENST00000361575 NR1H3Q13133 447 aa8.83□□□□□ -1
RPL39-201ENST00000361575 ANKK1Q8NFD2 765 aa8.83□□□□□ -1
RPL39-201ENST00000361575 PRR14Q9BWN1 585 aa8.83□□□□□ -1
RPL39-201ENST00000361575 CCDC9Q9Y3X0 531 aaKnown RBP8.83□□□□□ -1
RPL39-201ENST00000361575 PIK3CDO00329 1044 aa8.82□□□□□ -1
RPL39-201ENST00000361575 JUNDP17535 347 aa8.82□□□□□ -1
RPL39-201ENST00000361575 PPP4CP60510 307 aa8.82□□□□□ -1
RPL39-201ENST00000361575 SEMA3FQ13275 785 aa8.82□□□□□ -1
RPL39-201ENST00000361575 FAM163AQ96GL9 167 aaPredicted RBP8.82□□□□□ -1
RPL39-201ENST00000361575 FKBPLQ9UIM3 349 aa8.82□□□□□ -1
RPL39-201ENST00000361575 USTQ9Y2C2 406 aa8.82□□□□□ -1
RPL39-201ENST00000361575 PTPRNQ16849 979 aa8.81□□□□□ -1
RPL39-201ENST00000361575 CDCA8Q53HL2 280 aa8.81□□□□□ -1
RPL39-201ENST00000361575 TSR3Q9UJK0 312 aaKnown RBP8.81□□□□□ -1
RPL39-201ENST00000361575 PCDHB3Q9Y5E6 796 aa8.81□□□□□ -1
RPL39-201ENST00000361575 TMEM88BA6NKF7 163 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms