RNA–Protein interactions for RNA: ENST00000356634.7

KDM1A-201, Transcript of lysine demethylase 1A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KDM1A, Length 3,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-201ENST00000356634 SPAG9O60271 1321 aaKnown RBP22.38■■□□□ 1.17
KDM1A-201ENST00000356634 IQGAP3Q86VI3 1631 aa22.37■■□□□ 1.17
KDM1A-201ENST00000356634 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.36■■□□□ 1.173e-10■■□□□ 13.4
KDM1A-201ENST00000356634 PKNOX2Q96KN3 472 aa22.36■■□□□ 1.17
KDM1A-201ENST00000356634 MVPQ14764 893 aaKnown RBP22.35■■□□□ 1.17
KDM1A-201ENST00000356634 PREX2Q70Z35 1606 aa22.35■■□□□ 1.17
KDM1A-201ENST00000356634 AAMPQ13685 434 aa22.34■■□□□ 1.17
KDM1A-201ENST00000356634 ITPRIPQ8IWB1 547 aa22.34■■□□□ 1.17
KDM1A-201ENST00000356634 MADDQ8WXG6 1647 aa22.34■■□□□ 1.17
KDM1A-201ENST00000356634 DDX11L8A8MPP1 907 aa22.33■■□□□ 1.17
KDM1A-201ENST00000356634 ZKSCAN2Q63HK3 967 aa22.33■■□□□ 1.17
KDM1A-201ENST00000356634 DZIP1LQ8IYY4 767 aaKnown RBP22.33■■□□□ 1.17
KDM1A-201ENST00000356634 FOXD4L1Q9NU39 408 aa22.33■■□□□ 1.17
KDM1A-201ENST00000356634 CHD1O14646 1710 aa22.33■■□□□ 1.17
KDM1A-201ENST00000356634 IQGAP1P46940 1657 aa22.33■■□□□ 1.17
KDM1A-201ENST00000356634 ESPNB1AK53 854 aa22.33■■□□□ 1.16
KDM1A-201ENST00000356634 ATP10AO60312 1499 aa22.32■■□□□ 1.16
KDM1A-201ENST00000356634 MAST1Q9Y2H9 1570 aa22.32■■□□□ 1.16
KDM1A-201ENST00000356634 TSR2Q969E8 191 aaKnown RBP22.32■■□□□ 1.16
KDM1A-201ENST00000356634 SMC4Q9NTJ3 1288 aa22.32■■□□□ 1.16
KDM1A-201ENST00000356634 U2AF1L5P0DN76 240 aaPredicted RBP22.31■■□□□ 1.16
KDM1A-201ENST00000356634 MTHFSP49914 203 aa22.31■■□□□ 1.16
KDM1A-201ENST00000356634 U2AF1Q01081 240 aaKnown RBP eCLIP22.31■■□□□ 1.161e-8■■■□□ 17.3
KDM1A-201ENST00000356634 HSP90AB1P08238 724 aaKnown RBP22.3■■□□□ 1.16
KDM1A-201ENST00000356634 POLR3AO14802 1390 aaPredicted RBP22.3■■□□□ 1.16
KDM1A-201ENST00000356634 DUOX2Q9NRD8 1548 aa22.3■■□□□ 1.16
KDM1A-201ENST00000356634 MYOM1P52179 1685 aa22.29■■□□□ 1.16
KDM1A-201ENST00000356634 WDR63Q8IWG1 891 aa22.29■■□□□ 1.16
KDM1A-201ENST00000356634 SLC12A5Q9H2X9 1139 aa22.29■■□□□ 1.16
KDM1A-201ENST00000356634 KDM5AP29375 1690 aaKnown RBP22.29■■□□□ 1.16
KDM1A-201ENST00000356634 ERBB4Q15303 1308 aa22.28■■□□□ 1.16
KDM1A-201ENST00000356634 CFAP53Q96M91 514 aa22.28■■□□□ 1.16
KDM1A-201ENST00000356634 PLXNC1O60486 1568 aa22.27■■□□□ 1.16
KDM1A-201ENST00000356634 NSD3Q9BZ95 1437 aa22.27■■□□□ 1.16
KDM1A-201ENST00000356634 GGT6Q6P531 493 aa22.27■■□□□ 1.16
KDM1A-201ENST00000356634 ZMYND15Q9H091 742 aa22.26■■□□□ 1.15
KDM1A-201ENST00000356634 ADGRF5Q8IZF2 1346 aa22.26■■□□□ 1.15
KDM1A-201ENST00000356634 SCAPERQ9BY12 1400 aa22.26■■□□□ 1.15
KDM1A-201ENST00000356634 RRP9O43818 475 aaKnown RBP22.25■■□□□ 1.15
KDM1A-201ENST00000356634 TNPO1Q92973 898 aaKnown RBP22.25■■□□□ 1.15
KDM1A-201ENST00000356634 TRAK1Q9UPV9 953 aa22.25■■□□□ 1.15
KDM1A-201ENST00000356634 ERVK-7P63135 1459 aa22.25■■□□□ 1.15
KDM1A-201ENST00000356634 LNPKQ9C0E8 428 aa22.24■■□□□ 1.15
KDM1A-201ENST00000356634 ZMYM3Q14202 1370 aa22.23■■□□□ 1.15
KDM1A-201ENST00000356634 SLC24A1O60721 1099 aa22.23■■□□□ 1.15
KDM1A-201ENST00000356634 GAS2L3Q86XJ1 694 aa22.23■■□□□ 1.15
KDM1A-201ENST00000356634 GBP4Q96PP9 640 aa22.23■■□□□ 1.15
KDM1A-201ENST00000356634 TRIM27P14373 513 aa22.23■■□□□ 1.15
KDM1A-201ENST00000356634 EXOSC9Q06265 439 aaKnown RBP22.23■■□□□ 1.15
KDM1A-201ENST00000356634 STAC3Q96MF2 364 aa22.23■■□□□ 1.15
KDM1A-201ENST00000356634 U2SURPO15042 1029 aaKnown RBP22.22■■□□□ 1.15
KDM1A-201ENST00000356634 SAFB2Q14151 953 aaKnown RBP eCLIP22.22■■□□□ 1.15
KDM1A-201ENST00000356634 RTEL1-TNFRSF6BF6WH68 1400 aa22.2■■□□□ 1.15
KDM1A-201ENST00000356634 ZNF692Q9BU19 519 aaPredicted RBP22.2■■□□□ 1.15
KDM1A-201ENST00000356634 DDX19BQ9UMR2 479 aa22.2■■□□□ 1.15
KDM1A-201ENST00000356634 TMEM132EQ6IEE7 984 aa22.19■■□□□ 1.14
KDM1A-201ENST00000356634 SSH1Q8WYL5 1049 aa22.19■■□□□ 1.14
KDM1A-201ENST00000356634 CEP152O94986 1710 aa22.19■■□□□ 1.14
KDM1A-201ENST00000356634 PHF23Q9BUL5 403 aaPredicted RBP22.18■■□□□ 1.14
KDM1A-201ENST00000356634 NOB1Q9ULX3 412 aaKnown RBP22.18■■□□□ 1.14
KDM1A-201ENST00000356634 PLCH2O75038 1416 aa22.18■■□□□ 1.14
KDM1A-201ENST00000356634 SPHKAPQ2M3C7 1700 aa22.17■■□□□ 1.14
KDM1A-201ENST00000356634 TMEM57Q8N5G2 664 aa22.17■■□□□ 1.14
KDM1A-201ENST00000356634 ATF7IPQ6VMQ6 1270 aa22.17■■□□□ 1.14
KDM1A-201ENST00000356634 HDAC1Q13547 482 aaPredicted RBP22.16■■□□□ 1.14
KDM1A-201ENST00000356634 ISY1Q9ULR0 285 aaKnown RBP22.16■■□□□ 1.14
KDM1A-201ENST00000356634 CLTCL1P53675 1640 aa22.15■■□□□ 1.14
KDM1A-201ENST00000356634 ANP32BQ92688 251 aaKnown RBP22.15■■□□□ 1.14
KDM1A-201ENST00000356634 TRPM2O94759 1503 aa22.14■■□□□ 1.14
KDM1A-201ENST00000356634 CCDC27Q2M243 656 aa22.14■■□□□ 1.13
KDM1A-201ENST00000356634 KANK1Q14678 1352 aa22.13■■□□□ 1.13
KDM1A-201ENST00000356634 SMC5Q8IY18 1101 aa22.13■■□□□ 1.13
KDM1A-201ENST00000356634 UGGT1Q9NYU2 1555 aa22.12■■□□□ 1.13
KDM1A-201ENST00000356634 NCLP19338 710 aaKnown RBP22.12■■□□□ 1.13
KDM1A-201ENST00000356634 SKOR2Q2VWA4 1001 aaPredicted RBP22.12■■□□□ 1.13
KDM1A-201ENST00000356634 RBM42Q9BTD8 480 aaKnown RBP22.12■■□□□ 1.13
KDM1A-201ENST00000356634 IQSEC2Q5JU85 1478 aa22.12■■□□□ 1.13
KDM1A-201ENST00000356634 RBM25P49756 843 aaKnown RBP22.11■■□□□ 1.13
KDM1A-201ENST00000356634 RAB3GAP1Q15042 981 aa22.11■■□□□ 1.13
KDM1A-201ENST00000356634 CFAP65Q6ZU64 1925 aaKnown RBP22.11■■□□□ 1.13
KDM1A-201ENST00000356634 GOLGA6L22H0YM25 854 aa22.11■■□□□ 1.13
KDM1A-201ENST00000356634 CD2BP2O95400 341 aaKnown RBP22.11■■□□□ 1.13
KDM1A-201ENST00000356634 NASPP49321 788 aaPredicted RBP22.11■■□□□ 1.13
KDM1A-201ENST00000356634 ANKRD45Q5TZF3 282 aa22.11■■□□□ 1.13
KDM1A-201ENST00000356634 KIAA1211Q6ZU35 1233 aa22.11■■□□□ 1.13
KDM1A-201ENST00000356634 PTPRTO14522 1441 aa22.1■■□□□ 1.13
KDM1A-201ENST00000356634 DDX49Q9Y6V7 483 aaKnown RBP22.1■■□□□ 1.13
KDM1A-201ENST00000356634 SSFA2P28290 1259 aa22.1■■□□□ 1.13
KDM1A-201ENST00000356634 SNX21Q969T3 373 aa22.1■■□□□ 1.13
KDM1A-201ENST00000356634 DDIT3P35638 169 aa22.09■■□□□ 1.13
KDM1A-201ENST00000356634 CHD1LQ86WJ1 897 aa22.09■■□□□ 1.13
KDM1A-201ENST00000356634 SHPRHQ149N8 1683 aa22.09■■□□□ 1.13
KDM1A-201ENST00000356634 CIZ1Q9ULV3 898 aaPredicted RBP22.09■■□□□ 1.13
KDM1A-201ENST00000356634 RAPGEF3O95398 923 aa22.08■■□□□ 1.13
KDM1A-201ENST00000356634 C1orf115Q9H7X2 142 aa22.08■■□□□ 1.12
KDM1A-201ENST00000356634 MSNP26038 577 aaKnown RBP22.07■■□□□ 1.12
KDM1A-201ENST00000356634 NUCB1Q02818 461 aa22.07■■□□□ 1.12
KDM1A-201ENST00000356634 ZBTB40Q9NUA8 1239 aa22.07■■□□□ 1.12
KDM1A-201ENST00000356634 TMPOP42166 694 aaKnown RBP22.06■■□□□ 1.12
KDM1A-201ENST00000356634 ZNF518AQ6AHZ1 1483 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms