RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 SAFBQ15424 915 aaKnown RBP eCLIP9.62□□□□□ -0.87
SCN8A-201ENST00000354534 SMC3Q9UQE7 1217 aa9.62□□□□□ -0.87
SCN8A-201ENST00000354534 NGEFQ8N5V2 710 aa9.62□□□□□ -0.87
SCN8A-201ENST00000354534 PPM1FP49593 454 aaPredicted RBP9.62□□□□□ -0.87
SCN8A-201ENST00000354534 LTV1Q96GA3 475 aaPredicted RBP9.61□□□□□ -0.87
SCN8A-201ENST00000354534 SIN3AQ96ST3 1273 aa9.61□□□□□ -0.87
SCN8A-201ENST00000354534 E9PSI1 815 aa9.61□□□□□ -0.87
SCN8A-201ENST00000354534 DAAM2Q86T65 1068 aa9.61□□□□□ -0.87
SCN8A-201ENST00000354534 UQCRHLA0A096LP55 91 aa9.61□□□□□ -0.87
SCN8A-201ENST00000354534 UQCRHP07919 91 aa9.61□□□□□ -0.87
SCN8A-201ENST00000354534 PRDM10Q9NQV6 1147 aa9.61□□□□□ -0.87
SCN8A-201ENST00000354534 TNIKQ9UKE5 1360 aa9.61□□□□□ -0.87
SCN8A-201ENST00000354534 DCAF11Q8TEB1 546 aa9.61□□□□□ -0.87
SCN8A-201ENST00000354534 DNAJC2Q99543 621 aaKnown RBP9.61□□□□□ -0.87
SCN8A-201ENST00000354534 SDF4Q9BRK5 362 aa9.61□□□□□ -0.87
SCN8A-201ENST00000354534 KLHL34Q8N239 644 aa9.61□□□□□ -0.87
SCN8A-201ENST00000354534 ARHGAP35Q9NRY4 1499 aa9.6□□□□□ -0.87
SCN8A-201ENST00000354534 ERLIN1O75477 346 aa9.6□□□□□ -0.87
SCN8A-201ENST00000354534 ZKSCAN1P17029 563 aaPredicted RBP9.6□□□□□ -0.87
SCN8A-201ENST00000354534 FMNL2Q96PY5 1086 aa9.6□□□□□ -0.87
SCN8A-201ENST00000354534 ROCK2O75116 1388 aaKnown RBP9.6□□□□□ -0.87
SCN8A-201ENST00000354534 TMCO3Q6UWJ1 677 aa9.6□□□□□ -0.87
SCN8A-201ENST00000354534 RUFY2Q8WXA3 655 aa9.6□□□□□ -0.87
SCN8A-201ENST00000354534 CCDC113Q9H0I3 377 aa9.6□□□□□ -0.87
SCN8A-201ENST00000354534 SHTN1A0MZ66 631 aa9.6□□□□□ -0.87
SCN8A-201ENST00000354534 SERPINA10Q9UK55 444 aa9.6□□□□□ -0.87
SCN8A-201ENST00000354534 GRIPAP1Q4V328 841 aa9.59□□□□□ -0.87
SCN8A-201ENST00000354534 ZNHIT6Q9NWK9 470 aaKnown RBP9.59□□□□□ -0.87
SCN8A-201ENST00000354534 HDGFL2Q7Z4V5 671 aaPredicted RBP9.59□□□□□ -0.87
SCN8A-201ENST00000354534 MTMR7Q9Y216 660 aa9.59□□□□□ -0.87
SCN8A-201ENST00000354534 PDE4AP27815 886 aa9.59□□□□□ -0.87
SCN8A-201ENST00000354534 BRMS1Q9HCU9 246 aa9.59□□□□□ -0.87
SCN8A-201ENST00000354534 VPS37DQ86XT2 251 aa9.59□□□□□ -0.87
SCN8A-201ENST00000354534 NEBLO76041 1014 aa9.59□□□□□ -0.87
SCN8A-201ENST00000354534 HSP90AB4PQ58FF6 505 aa9.58□□□□□ -0.88
SCN8A-201ENST00000354534 CCDC160A6NGH7 325 aa9.58□□□□□ -0.88
SCN8A-201ENST00000354534 PDE3BQ13370 1112 aa9.58□□□□□ -0.88
SCN8A-201ENST00000354534 PDCL3Q9H2J4 239 aa9.58□□□□□ -0.88
SCN8A-201ENST00000354534 TRERF1Q96PN7 1200 aa9.58□□□□□ -0.88
SCN8A-201ENST00000354534 UBE4AQ14139 1066 aa9.58□□□□□ -0.88
SCN8A-201ENST00000354534 LUC7LQ9NQ29 371 aaKnown RBP9.58□□□□□ -0.88
SCN8A-201ENST00000354534 KIF3BO15066 747 aa9.58□□□□□ -0.88
SCN8A-201ENST00000354534 VGFO15240 615 aaPredicted RBP9.58□□□□□ -0.88
SCN8A-201ENST00000354534 RNF187Q5TA31 235 aaPredicted RBP9.58□□□□□ -0.88
SCN8A-201ENST00000354534 MRE11P49959 708 aa9.58□□□□□ -0.88
SCN8A-201ENST00000354534 CENPJQ9HC77 1338 aaPredicted RBP9.57□□□□□ -0.88
SCN8A-201ENST00000354534 SMC1AQ14683 1233 aaKnown RBP9.57□□□□□ -0.88
SCN8A-201ENST00000354534 REC8O95072 547 aa9.57□□□□□ -0.88
SCN8A-201ENST00000354534 LETM1O95202 739 aaPredicted RBP9.57□□□□□ -0.88
SCN8A-201ENST00000354534 NUCB2P80303 420 aa9.57□□□□□ -0.88
SCN8A-201ENST00000354534 CDK5RAP3Q96JB5 506 aa9.57□□□□□ -0.88
SCN8A-201ENST00000354534 SEPT6Q14141 434 aa9.57□□□□□ -0.88
SCN8A-201ENST00000354534 RNF20Q5VTR2 975 aa9.57□□□□□ -0.88
SCN8A-201ENST00000354534 TMCO5BA8MYB1 307 aa9.57□□□□□ -0.88
SCN8A-201ENST00000354534 CENPQQ7L2Z9 268 aaPredicted RBP9.56□□□□□ -0.88
SCN8A-201ENST00000354534 RRP9O43818 475 aaKnown RBP9.56□□□□□ -0.88
SCN8A-201ENST00000354534 TIGD1Q96MW7 591 aa9.56□□□□□ -0.88
SCN8A-201ENST00000354534 CCDC27Q2M243 656 aa9.56□□□□□ -0.88
SCN8A-201ENST00000354534 IQCEQ6IPM2 695 aa9.56□□□□□ -0.88
SCN8A-201ENST00000354534 SETD5Q9C0A6 1442 aa9.56□□□□□ -0.88
SCN8A-201ENST00000354534 SERPINC1P01008 464 aa9.56□□□□□ -0.88
SCN8A-201ENST00000354534 WRNQ14191 1432 aaPredicted RBP eCLIP9.56□□□□□ -0.88
SCN8A-201ENST00000354534 CBX1P83916 185 aa9.56□□□□□ -0.88
SCN8A-201ENST00000354534 FYB1O15117 783 aa9.56□□□□□ -0.88
SCN8A-201ENST00000354534 GTF2A1P52655 376 aaPredicted RBP9.56□□□□□ -0.88
SCN8A-201ENST00000354534 TSPY26PQ9H489 355 aa9.56□□□□□ -0.88
SCN8A-201ENST00000354534 TXLNAP40222 546 aa9.56□□□□□ -0.88
SCN8A-201ENST00000354534 CAVIN1Q6NZI2 390 aaKnown RBP9.56□□□□□ -0.88
SCN8A-201ENST00000354534 CGNQ9P2M7 1197 aaKnown RBP9.55□□□□□ -0.88
SCN8A-201ENST00000354534 ANAPC15P60006 121 aa9.55□□□□□ -0.88
SCN8A-201ENST00000354534 FEZ1Q99689 392 aa9.55□□□□□ -0.88
SCN8A-201ENST00000354534 NUTM2FA1L443 756 aa9.55□□□□□ -0.88
SCN8A-201ENST00000354534 XBP1P17861 261 aa9.55□□□□□ -0.88
SCN8A-201ENST00000354534 KINO60870 393 aaKnown RBP9.55□□□□□ -0.88
SCN8A-201ENST00000354534 PPFIBP1Q86W92 1011 aa9.55□□□□□ -0.88
SCN8A-201ENST00000354534 IKQ13123 557 aaPredicted RBP9.54□□□□□ -0.88
SCN8A-201ENST00000354534 FAM184BQ9ULE4 1060 aa9.54□□□□□ -0.88
SCN8A-201ENST00000354534 NAP1L3Q99457 506 aaPredicted RBP9.54□□□□□ -0.88
SCN8A-201ENST00000354534 MICALCLQ6ZW33 695 aa9.54□□□□□ -0.88
SCN8A-201ENST00000354534 ANKRD18BA2A2Z9 1011 aa9.54□□□□□ -0.88
SCN8A-201ENST00000354534 CRACR2AQ9BSW2 395 aa9.54□□□□□ -0.88
SCN8A-201ENST00000354534 NECTIN2Q92692 538 aa9.54□□□□□ -0.88
SCN8A-201ENST00000354534 GOPCQ9HD26 462 aa9.54□□□□□ -0.88
SCN8A-201ENST00000354534 RB1CC1Q8TDY2 1594 aa9.54□□□□□ -0.88
SCN8A-201ENST00000354534 KRT18P05783 430 aaKnown RBP9.54□□□□□ -0.88
SCN8A-201ENST00000354534 TANGO6Q9C0B7 1094 aa9.54□□□□□ -0.88
SCN8A-201ENST00000354534 CALCOCO1Q9P1Z2 691 aa9.54□□□□□ -0.88
SCN8A-201ENST00000354534 TXLNBQ8N3L3 684 aa9.53□□□□□ -0.88
SCN8A-201ENST00000354534 SSR1P43307 286 aaKnown RBP9.53□□□□□ -0.88
SCN8A-201ENST00000354534 IL27Q8NEV9 243 aa9.52□□□□□ -0.89
SCN8A-201ENST00000354534 PSMD1Q99460 953 aa9.52□□□□□ -0.89
SCN8A-201ENST00000354534 MPNDQ8N594 471 aa9.52□□□□□ -0.89
SCN8A-201ENST00000354534 IFIT2P09913 472 aaKnown RBP9.52□□□□□ -0.89
SCN8A-201ENST00000354534 NFKBIBQ15653 356 aa9.52□□□□□ -0.89
SCN8A-201ENST00000354534 PDCL2Q8N4E4 241 aa9.52□□□□□ -0.89
SCN8A-201ENST00000354534 BRPF3Q9ULD4 1205 aa9.52□□□□□ -0.89
SCN8A-201ENST00000354534 TRAK2O60296 914 aa9.52□□□□□ -0.89
SCN8A-201ENST00000354534 KIAA1328Q86T90 577 aa9.52□□□□□ -0.89
SCN8A-201ENST00000354534 SRRTQ9BXP5 876 aaKnown RBP9.51□□□□□ -0.89
SCN8A-201ENST00000354534 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms