RNA–Protein interactions for RNA: ENST00000343017.11

SNX18-202, Transcript of sorting nexin 18, humanhuman

BASIC

Gene SNX18, Length 3,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18-202ENST00000343017 NINLQ9Y2I6 1382 aa19.18■□□□□ 0.66
SNX18-202ENST00000343017 MYO5CQ9NQX4 1742 aa19.17■□□□□ 0.66
SNX18-202ENST00000343017 LAMC1P11047 1609 aa19.17■□□□□ 0.66
SNX18-202ENST00000343017 ZCCHC11Q5TAX3 1644 aaKnown RBP19.16■□□□□ 0.66
SNX18-202ENST00000343017 DDIT3P35638 169 aa19.16■□□□□ 0.66
SNX18-202ENST00000343017 MVPQ14764 893 aaKnown RBP19.16■□□□□ 0.66
SNX18-202ENST00000343017 PLCH2O75038 1416 aa19.16■□□□□ 0.66
SNX18-202ENST00000343017 HSP90AB1P08238 724 aaKnown RBP19.16■□□□□ 0.66
SNX18-202ENST00000343017 CYB5RLQ6IPT4 315 aa19.16■□□□□ 0.66
SNX18-202ENST00000343017 FTSJ3Q8IY81 847 aaKnown RBP19.16■□□□□ 0.66
SNX18-202ENST00000343017 ARID3AQ99856 593 aa19.16■□□□□ 0.66
SNX18-202ENST00000343017 TPM2P07951 284 aa19.15■□□□□ 0.66
SNX18-202ENST00000343017 PDCL3Q9H2J4 239 aa19.15■□□□□ 0.66
SNX18-202ENST00000343017 CD2BP2O95400 341 aaKnown RBP19.15■□□□□ 0.66
SNX18-202ENST00000343017 KIF3BO15066 747 aa19.14■□□□□ 0.66
SNX18-202ENST00000343017 PREX2Q70Z35 1606 aa19.14■□□□□ 0.65
SNX18-202ENST00000343017 TSR2Q969E8 191 aaKnown RBP19.13■□□□□ 0.65
SNX18-202ENST00000343017 RBM42Q9BTD8 480 aaKnown RBP19.13■□□□□ 0.65
SNX18-202ENST00000343017 DZIP1LQ8IYY4 767 aaKnown RBP19.12■□□□□ 0.65
SNX18-202ENST00000343017 RUNDC1Q96C34 613 aa19.12■□□□□ 0.65
SNX18-202ENST00000343017 EIF2AK4Q9P2K8 1649 aaKnown RBP19.12■□□□□ 0.65
SNX18-202ENST00000343017 RIPK4P57078 832 aa19.11■□□□□ 0.65
SNX18-202ENST00000343017 ITPRIPQ8IWB1 547 aa19.11■□□□□ 0.65
SNX18-202ENST00000343017 NASPP49321 788 aaPredicted RBP19.11■□□□□ 0.65
SNX18-202ENST00000343017 GBP4Q96PP9 640 aa19.11■□□□□ 0.65
SNX18-202ENST00000343017 SENP3Q9H4L4 574 aaPredicted RBP19.11■□□□□ 0.65
SNX18-202ENST00000343017 FAM13BQ9NYF5 915 aa19.11■□□□□ 0.65
SNX18-202ENST00000343017 SSFA2P28290 1259 aa19.1■□□□□ 0.65
SNX18-202ENST00000343017 ZKSCAN2Q63HK3 967 aa19.1■□□□□ 0.65
SNX18-202ENST00000343017 LNPKQ9C0E8 428 aa19.1■□□□□ 0.65
SNX18-202ENST00000343017 SCAPERQ9BY12 1400 aa19.1■□□□□ 0.65
SNX18-202ENST00000343017 RAB3GAP1Q15042 981 aa19.1■□□□□ 0.65
SNX18-202ENST00000343017 ISY1Q9ULR0 285 aaKnown RBP19.1■□□□□ 0.65
SNX18-202ENST00000343017 NPC1L1Q9UHC9 1359 aa19.1■□□□□ 0.65
SNX18-202ENST00000343017 SYNMO15061 1565 aa19.1■□□□□ 0.65
SNX18-202ENST00000343017 MORC1Q86VD1 984 aa19.09■□□□□ 0.65
SNX18-202ENST00000343017 NGEFQ8N5V2 710 aa19.09■□□□□ 0.65
SNX18-202ENST00000343017 ASXL2Q76L83 1435 aa19.09■□□□□ 0.65
SNX18-202ENST00000343017 AAMPQ13685 434 aa19.08■□□□□ 0.65
SNX18-202ENST00000343017 CFAP70Q5T0N1 1121 aa19.08■□□□□ 0.65
SNX18-202ENST00000343017 SMC5Q8IY18 1101 aa19.08■□□□□ 0.65
SNX18-202ENST00000343017 R3HCC1Q9Y3T6 440 aaKnown RBP19.08■□□□□ 0.65
SNX18-202ENST00000343017 ZMYM3Q14202 1370 aa19.08■□□□□ 0.64
SNX18-202ENST00000343017 ZSCAN30Q86W11 494 aa19.08■□□□□ 0.64
SNX18-202ENST00000343017 ARHGEF5Q12774 1597 aa19.07■□□□□ 0.64
SNX18-202ENST00000343017 SMC4Q9NTJ3 1288 aa19.07■□□□□ 0.64
SNX18-202ENST00000343017 SCAF11Q99590 1463 aaKnown RBP19.07■□□□□ 0.64
SNX18-202ENST00000343017 TRIM27P14373 513 aa19.07■□□□□ 0.64
SNX18-202ENST00000343017 NCOA3Q9Y6Q9 1424 aa19.06■□□□□ 0.64
SNX18-202ENST00000343017 OFD1O75665 1012 aa19.06■□□□□ 0.64
SNX18-202ENST00000343017 CCDC173Q0VFZ6 552 aa19.06■□□□□ 0.64
SNX18-202ENST00000343017 NCLP19338 710 aaKnown RBP19.05■□□□□ 0.64
SNX18-202ENST00000343017 RBM25P49756 843 aaKnown RBP19.05■□□□□ 0.64
SNX18-202ENST00000343017 WDR63Q8IWG1 891 aa19.05■□□□□ 0.64
SNX18-202ENST00000343017 KIF2CQ99661 725 aa19.05■□□□□ 0.64
SNX18-202ENST00000343017 DDX49Q9Y6V7 483 aaKnown RBP19.05■□□□□ 0.64
SNX18-202ENST00000343017 UHRF1BP1LA0JNW5 1464 aa19.05■□□□□ 0.64
SNX18-202ENST00000343017 PLXNC1O60486 1568 aa19.05■□□□□ 0.64
SNX18-202ENST00000343017 MYOM1P52179 1685 aa19.05■□□□□ 0.64
SNX18-202ENST00000343017 CHGAP10645 457 aaKnown RBP19.05■□□□□ 0.64
SNX18-202ENST00000343017 MSNP26038 577 aaKnown RBP19.05■□□□□ 0.64
SNX18-202ENST00000343017 RNF17Q9BXT8 1623 aaKnown RBP19.05■□□□□ 0.64
SNX18-202ENST00000343017 MTHFSP49914 203 aa19.05■□□□□ 0.64
SNX18-202ENST00000343017 EXOSC9Q06265 439 aaKnown RBP19.05■□□□□ 0.64
SNX18-202ENST00000343017 GGT6Q6P531 493 aa19.05■□□□□ 0.64
SNX18-202ENST00000343017 SNX21Q969T3 373 aa19.05■□□□□ 0.64
SNX18-202ENST00000343017 FANCAO15360 1455 aa19.04■□□□□ 0.64
SNX18-202ENST00000343017 SKOR2Q2VWA4 1001 aaPredicted RBP19.04■□□□□ 0.64
SNX18-202ENST00000343017 GAS2L2Q8NHY3 880 aa19.04■□□□□ 0.64
SNX18-202ENST00000343017 PPP1R9BQ96SB3 815 aa19.04■□□□□ 0.64
SNX18-202ENST00000343017 PHF23Q9BUL5 403 aaPredicted RBP19.04■□□□□ 0.64
SNX18-202ENST00000343017 POLR3AO14802 1390 aaPredicted RBP19.04■□□□□ 0.64
SNX18-202ENST00000343017 XPCQ01831 940 aaPredicted RBP19.03■□□□□ 0.64
SNX18-202ENST00000343017 SSH1Q8WYL5 1049 aa19.03■□□□□ 0.64
SNX18-202ENST00000343017 SLC12A5Q9H2X9 1139 aa19.03■□□□□ 0.64
SNX18-202ENST00000343017 HDAC1Q13547 482 aaPredicted RBP19.03■□□□□ 0.64
SNX18-202ENST00000343017 RAPGEF3O95398 923 aa19.02■□□□□ 0.64
SNX18-202ENST00000343017 TMEM57Q8N5G2 664 aa19.02■□□□□ 0.64
SNX18-202ENST00000343017 PRDM4Q9UKN5 801 aa19.02■□□□□ 0.63
SNX18-202ENST00000343017 NOB1Q9ULX3 412 aaKnown RBP19.02■□□□□ 0.63
SNX18-202ENST00000343017 IQGAP1P46940 1657 aa19.02■□□□□ 0.63
SNX18-202ENST00000343017 U2AF1L5P0DN76 240 aaPredicted RBP19.01■□□□□ 0.63
SNX18-202ENST00000343017 U2AF1Q01081 240 aaKnown RBP eCLIP19.01■□□□□ 0.63
SNX18-202ENST00000343017 ZBTB7CA1YPR0 619 aa19.01■□□□□ 0.63
SNX18-202ENST00000343017 ANP32BQ92688 251 aaKnown RBP19.01■□□□□ 0.63
SNX18-202ENST00000343017 CIZ1Q9ULV3 898 aaPredicted RBP19.01■□□□□ 0.63
SNX18-202ENST00000343017 MADDQ8WXG6 1647 aa19■□□□□ 0.63
SNX18-202ENST00000343017 ADGRL1O94910 1474 aa19■□□□□ 0.63
SNX18-202ENST00000343017 CAVIN1Q6NZI2 390 aaKnown RBP18.99■□□□□ 0.63
SNX18-202ENST00000343017 UNC13BO14795 1591 aa18.99■□□□□ 0.63
SNX18-202ENST00000343017 BAG4O95429 457 aaKnown RBP18.98■□□□□ 0.63
SNX18-202ENST00000343017 ERVK-7P63135 1459 aa18.98■□□□□ 0.63
SNX18-202ENST00000343017 K7ELQ4 463 aaPredicted RBP18.98■□□□□ 0.63
SNX18-202ENST00000343017 CALD1Q05682 793 aaKnown RBP18.98■□□□□ 0.63
SNX18-202ENST00000343017 MCTP1Q6DN14 999 aa18.98■□□□□ 0.63
SNX18-202ENST00000343017 DDX19BQ9UMR2 479 aa18.98■□□□□ 0.63
SNX18-202ENST00000343017 ATF7IPQ6VMQ6 1270 aa18.98■□□□□ 0.63
SNX18-202ENST00000343017 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.98■□□□□ 0.63
SNX18-202ENST00000343017 NUCB1Q02818 461 aa18.97■□□□□ 0.63
SNX18-202ENST00000343017 CHAMP1Q96JM3 812 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms