RNA–Protein interactions for RNA: ENST00000337304.2

ATF4-201, Transcript of activating transcription factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF4, Length 2,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4-201ENST00000337304 MINK1Q8N4C8 1332 aaPredicted RBP35.43■■■■□ 3.26
ATF4-201ENST00000337304 TECPR2O15040 1411 aa35.41■■■■□ 3.26
ATF4-201ENST00000337304 AMER1Q5JTC6 1135 aaPredicted RBP35.4■■■■□ 3.26
ATF4-201ENST00000337304 PLEKHH1Q9ULM0 1364 aa35.39■■■■□ 3.26
ATF4-201ENST00000337304 WAPLQ7Z5K2 1190 aa35.39■■■■□ 3.26
ATF4-201ENST00000337304 CPS1P31327 1500 aa35.39■■■■□ 3.26
ATF4-201ENST00000337304 CABP2Q9NPB3 220 aa35.39■■■■□ 3.26
ATF4-201ENST00000337304 SLC12A5Q9H2X9 1139 aa35.37■■■■□ 3.25
ATF4-201ENST00000337304 TMC1Q8TDI8 760 aa35.36■■■■□ 3.25
ATF4-201ENST00000337304 CARD14Q9BXL6 1004 aa35.36■■■■□ 3.25
ATF4-201ENST00000337304 BRD4O60885 1362 aaPredicted RBP35.35■■■■□ 3.25
ATF4-201ENST00000337304 FAM135BQ49AJ0 1406 aa35.35■■■■□ 3.25
ATF4-201ENST00000337304 SIRT1Q96EB6 747 aa35.35■■■■□ 3.25
ATF4-201ENST00000337304 NPC1L1Q9UHC9 1359 aa35.35■■■■□ 3.25
ATF4-201ENST00000337304 FAM9BQ8IZU0 186 aa35.33■■■■□ 3.25
ATF4-201ENST00000337304 SLC26A8Q96RN1 970 aa35.33■■■■□ 3.25
ATF4-201ENST00000337304 SRPK2P78362 688 aaKnown RBP35.32■■■■□ 3.25
ATF4-201ENST00000337304 DIP2AQ14689 1571 aa35.31■■■■□ 3.24
ATF4-201ENST00000337304 NLRP13Q86W25 1043 aa35.3■■■■□ 3.24
ATF4-201ENST00000337304 TBX22Q9Y458 520 aa35.3■■■■□ 3.24
ATF4-201ENST00000337304 ATAD2Q6PL18 1390 aa35.29■■■■□ 3.24
ATF4-201ENST00000337304 CDK19Q9BWU1 502 aa35.28■■■■□ 3.24
ATF4-201ENST00000337304 PTPRUQ92729 1446 aa35.27■■■■□ 3.24
ATF4-201ENST00000337304 NINLQ9Y2I6 1382 aa35.27■■■■□ 3.24
ATF4-201ENST00000337304 ROBO2Q9HCK4 1378 aa35.25■■■■□ 3.23
ATF4-201ENST00000337304 NSD3Q9BZ95 1437 aa35.25■■■■□ 3.23
ATF4-201ENST00000337304 ANKRD36BQ8N2N9 1353 aa35.25■■■■□ 3.23
ATF4-201ENST00000337304 PNISRQ8TF01 805 aaKnown RBP35.23■■■■□ 3.23
ATF4-201ENST00000337304 USP32Q8NFA0 1604 aa35.22■■■■□ 3.23
ATF4-201ENST00000337304 HNRNPUQ00839 825 aaKnown RBP eCLIP35.22■■■■□ 3.23
ATF4-201ENST00000337304 ANKLE2Q86XL3 938 aa35.2■■■■□ 3.22
ATF4-201ENST00000337304 WASLO00401 505 aaPredicted RBP35.16■■■■□ 3.22
ATF4-201ENST00000337304 AMOTL2Q9Y2J4 779 aa35.16■■■■□ 3.22
ATF4-201ENST00000337304 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.16■■■■□ 3.22
ATF4-201ENST00000337304 PPP2R1AP30153 589 aa35.16■■■■□ 3.22
ATF4-201ENST00000337304 A0A1W2PP64 1363 aa35.15■■■■□ 3.22
ATF4-201ENST00000337304 CD163L1Q9NR16 1453 aa35.14■■■■□ 3.22
ATF4-201ENST00000337304 XRN1Q8IZH2 1706 aaKnown RBP35.14■■■■□ 3.22
ATF4-201ENST00000337304 ADGRB2O60241 1585 aa35.13■■■■□ 3.21
ATF4-201ENST00000337304 PTCH1Q13635 1447 aa35.13■■■■□ 3.21
ATF4-201ENST00000337304 PIK3R4Q99570 1358 aa35.11■■■■□ 3.21
ATF4-201ENST00000337304 TERF2IPQ9NYB0 399 aa35.09■■■■□ 3.21
ATF4-201ENST00000337304 CABP1Q9NZU7 370 aa35.09■■■■□ 3.21
ATF4-201ENST00000337304 CGNL1Q0VF96 1302 aa35.09■■■■□ 3.21
ATF4-201ENST00000337304 ATP7BP35670 1465 aa35.04■■■■□ 3.2
ATF4-201ENST00000337304 CHD2O14647 1828 aaKnown RBP35.04■■■■□ 3.2
ATF4-201ENST00000337304 HDGFL2Q7Z4V5 671 aaPredicted RBP35.03■■■■□ 3.2
ATF4-201ENST00000337304 SCAF1Q9H7N4 1312 aaKnown RBP35.03■■■■□ 3.2
ATF4-201ENST00000337304 NSD2O96028 1365 aa35.02■■■■□ 3.2
ATF4-201ENST00000337304 NUDT16Q96DE0 195 aaKnown RBP35.01■■■■□ 3.2
ATF4-201ENST00000337304 PPIP5K1Q6PFW1 1433 aa35.01■■■■□ 3.19
ATF4-201ENST00000337304 NPHP4O75161 1426 aaPredicted RBP35■■■■□ 3.19
ATF4-201ENST00000337304 MORC1Q86VD1 984 aa35■■■■□ 3.19
ATF4-201ENST00000337304 ZBED9Q6R2W3 1325 aa34.98■■■■□ 3.19
ATF4-201ENST00000337304 KCNA6P17658 529 aa34.98■■■■□ 3.19
ATF4-201ENST00000337304 GTF3C3Q9Y5Q9 886 aa34.97■■■■□ 3.19
ATF4-201ENST00000337304 PRR36Q9H6K5 1346 aa34.96■■■■□ 3.19
ATF4-201ENST00000337304 CCDC61Q9Y6R9 512 aa34.96■■■■□ 3.19
ATF4-201ENST00000337304 ANKRD26Q9UPS8 1709 aa34.95■■■■□ 3.19
ATF4-201ENST00000337304 CPSF1Q10570 1443 aaKnown RBP34.94■■■■□ 3.18
ATF4-201ENST00000337304 CDC42BPGQ6DT37 1551 aa34.94■■■■□ 3.18
ATF4-201ENST00000337304 TOPAZ1Q8N9V7 1692 aa34.94■■■■□ 3.18
ATF4-201ENST00000337304 NCKAP5LQ9HCH0 1330 aa34.93■■■■□ 3.18
ATF4-201ENST00000337304 KIF20BQ96Q89 1820 aa34.93■■■■□ 3.18
ATF4-201ENST00000337304 AKAP12Q02952 1782 aa34.91■■■■□ 3.18
ATF4-201ENST00000337304 INSRP06213 1382 aa34.9■■■■□ 3.18
ATF4-201ENST00000337304 ITSN1Q15811 1721 aa34.9■■■■□ 3.18
ATF4-201ENST00000337304 FYB1O15117 783 aa34.89■■■■□ 3.18
ATF4-201ENST00000337304 MON2Q7Z3U7 1717 aa34.89■■■■□ 3.18
ATF4-201ENST00000337304 KDM4FA0A1W2PPD8 638 aa34.88■■■■□ 3.17
ATF4-201ENST00000337304 TNNT2P45379 298 aaPredicted RBP34.88■■■■□ 3.17
ATF4-201ENST00000337304 GGNBP2Q9H3C7 697 aa34.87■■■■□ 3.17
ATF4-201ENST00000337304 BLMP54132 1417 aaPredicted RBP34.85■■■■□ 3.17
ATF4-201ENST00000337304 POLR3AO14802 1390 aaPredicted RBP34.84■■■■□ 3.17
ATF4-201ENST00000337304 EDC4Q6P2E9 1401 aaKnown RBP34.84■■■■□ 3.17
ATF4-201ENST00000337304 NUTM2FA1L443 756 aa34.82■■■■□ 3.17
ATF4-201ENST00000337304 ADAMTS8Q9UP79 889 aa34.82■■■■□ 3.16
ATF4-201ENST00000337304 WDR43Q15061 677 aaKnown RBP eCLIP34.81■■■■□ 3.163e-6■□□□□ 9.5
ATF4-201ENST00000337304 RGPD8O14715 1765 aaPredicted RBP34.81■■■■□ 3.16
ATF4-201ENST00000337304 NALCNQ8IZF0 1738 aa34.81■■■■□ 3.16
ATF4-201ENST00000337304 PLEKHG3A1L390 1219 aa34.79■■■■□ 3.16
ATF4-201ENST00000337304 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.79■■■■□ 3.16
ATF4-201ENST00000337304 NKTRP30414 1462 aaKnown RBP34.79■■■■□ 3.16
ATF4-201ENST00000337304 FMN2Q9NZ56 1722 aa34.78■■■■□ 3.16
ATF4-201ENST00000337304 NWD1Q149M9 1564 aa34.78■■■■□ 3.16
ATF4-201ENST00000337304 SENP3-EIF4A1A0A087X0R7 540 aa34.78■■■■□ 3.16
ATF4-201ENST00000337304 ZNF692Q9BU19 519 aaPredicted RBP34.78■■■■□ 3.16
ATF4-201ENST00000337304 MTHFSP49914 203 aa34.76■■■■□ 3.16
ATF4-201ENST00000337304 SHPRHQ149N8 1683 aa34.75■■■■□ 3.15
ATF4-201ENST00000337304 ACEP12821 1306 aa34.74■■■■□ 3.15
ATF4-201ENST00000337304 NRKQ7Z2Y5 1582 aa34.74■■■■□ 3.15
ATF4-201ENST00000337304 ANKARQ7Z5J8 1434 aa34.73■■■■□ 3.15
ATF4-201ENST00000337304 HSPA2P54652 639 aa34.69■■■■□ 3.14
ATF4-201ENST00000337304 NME9Q86XW9 330 aa34.69■■■■□ 3.14
ATF4-201ENST00000337304 RBM33Q96EV2 1170 aaKnown RBP34.68■■■■□ 3.14
ATF4-201ENST00000337304 ADGRL3Q9HAR2 1447 aa34.68■■■■□ 3.14
ATF4-201ENST00000337304 USP6P35125 1406 aa34.67■■■■□ 3.14
ATF4-201ENST00000337304 CFAP53Q96M91 514 aa34.67■■■■□ 3.14
ATF4-201ENST00000337304 LMTK3Q96Q04 1460 aa34.66■■■■□ 3.14
ATF4-201ENST00000337304 PMFBP1Q8TBY8 1022 aa34.64■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms