RNA–Protein interactions for RNA: ENST00000324394.7

ZNF404-201, Transcript of zinc finger protein 404, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF404, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404-201ENST00000324394 HOXA2O43364 376 aa8.11□□□□□ -1.11
ZNF404-201ENST00000324394 LILRB3O75022 631 aa8.11□□□□□ -1.11
ZNF404-201ENST00000324394 GJA5P36382 358 aa8.11□□□□□ -1.11
ZNF404-201ENST00000324394 HDGFP51858 240 aaKnown RBP8.11□□□□□ -1.11
ZNF404-201ENST00000324394 HLA-CQ95604 372 aa8.11□□□□□ -1.11
ZNF404-201ENST00000324394 TSR3Q9UJK0 312 aaKnown RBP8.11□□□□□ -1.11
ZNF404-201ENST00000324394 TMEM259Q4ZIN3 620 aa8.1□□□□□ -1.11
ZNF404-201ENST00000324394 RTL5Q5HYW3 569 aaPredicted RBP8.1□□□□□ -1.11
ZNF404-201ENST00000324394 BANK1Q8NDB2 785 aa8.1□□□□□ -1.11
ZNF404-201ENST00000324394 CABLES1Q8TDN4 633 aa8.1□□□□□ -1.11
ZNF404-201ENST00000324394 USP46P62068 366 aa8.1□□□□□ -1.11
ZNF404-201ENST00000324394 GUCA2AQ02747 115 aa8.1□□□□□ -1.11
ZNF404-201ENST00000324394 APBB1O00213 710 aa8.09□□□□□ -1.11
ZNF404-201ENST00000324394 TRAK2O60296 914 aa8.09□□□□□ -1.11
ZNF404-201ENST00000324394 PCDHGC3Q9UN70 934 aa8.09□□□□□ -1.11
ZNF404-201ENST00000324394 NUTM2BA6NNL0 878 aaPredicted RBP8.08□□□□□ -1.12
ZNF404-201ENST00000324394 NUTM2EB1AL46 878 aaPredicted RBP8.08□□□□□ -1.12
ZNF404-201ENST00000324394 FDX1P10109 184 aa8.08□□□□□ -1.12
ZNF404-201ENST00000324394 HRCP23327 699 aa8.08□□□□□ -1.12
ZNF404-201ENST00000324394 NUTM2DQ5VT03 806 aaPredicted RBP8.08□□□□□ -1.12
ZNF404-201ENST00000324394 NUTM2AQ8IVF1 878 aaPredicted RBP8.08□□□□□ -1.12
ZNF404-201ENST00000324394 RNF40O75150 1001 aa8.08□□□□□ -1.12
ZNF404-201ENST00000324394 HPS5Q9UPZ3 1129 aa8.08□□□□□ -1.12
ZNF404-201ENST00000324394 FUT2Q10981 343 aa8.07□□□□□ -1.12
ZNF404-201ENST00000324394 HOMEZQ8IX15 550 aa8.07□□□□□ -1.12
ZNF404-201ENST00000324394 SLF2Q8IX21 1173 aa8.07□□□□□ -1.12
ZNF404-201ENST00000324394 MTMR14Q8NCE2 650 aa8.07□□□□□ -1.12
ZNF404-201ENST00000324394 ARID3AQ99856 593 aa8.07□□□□□ -1.12
ZNF404-201ENST00000324394 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.07□□□□□ -1.12
ZNF404-201ENST00000324394 COG6Q9Y2V7 657 aa8.07□□□□□ -1.12
ZNF404-201ENST00000324394 AP1G2O75843 785 aa8.06□□□□□ -1.12
ZNF404-201ENST00000324394 CFHP08603 1231 aa8.06□□□□□ -1.12
ZNF404-201ENST00000324394 SLC4A3P48751 1232 aa8.06□□□□□ -1.12
ZNF404-201ENST00000324394 PRPF38BQ5VTL8 546 aaKnown RBP8.06□□□□□ -1.12
ZNF404-201ENST00000324394 LRCH3Q96II8 777 aa8.06□□□□□ -1.12
ZNF404-201ENST00000324394 PDZRN3Q9UPQ7 1066 aa8.06□□□□□ -1.12
ZNF404-201ENST00000324394 RAD21O60216 631 aa8.06□□□□□ -1.12
ZNF404-201ENST00000324394 PROSER2Q86WR7 435 aaPredicted RBP8.06□□□□□ -1.12
ZNF404-201ENST00000324394 FNBP4Q8N3X1 1017 aaPredicted RBP8.06□□□□□ -1.12
ZNF404-201ENST00000324394 ZBTB3Q9H5J0 574 aa8.06□□□□□ -1.12
ZNF404-201ENST00000324394 ZNF777Q9ULD5 760 aaPredicted RBP8.03□□□□□ -1.12
ZNF404-201ENST00000324394 USP17L8P0C7I0 530 aa8.03□□□□□ -1.12
ZNF404-201ENST00000324394 GDPD2Q9HCC8 539 aa8.03□□□□□ -1.12
ZNF404-201ENST00000324394 ATP6V1AP38606 617 aa8.02□□□□□ -1.13
ZNF404-201ENST00000324394 MTMR2Q13614 643 aa8.02□□□□□ -1.13
ZNF404-201ENST00000324394 TJAP1Q5JTD0 557 aa8.02□□□□□ -1.13
ZNF404-201ENST00000324394 CTDSPL2Q05D32 466 aa8.01□□□□□ -1.13
ZNF404-201ENST00000324394 GRIPAP1Q4V328 841 aa8.01□□□□□ -1.13
ZNF404-201ENST00000324394 PPP1R18Q6NYC8 613 aa8.01□□□□□ -1.13
ZNF404-201ENST00000324394 SYMPKQ92797 1274 aaKnown RBP8.01□□□□□ -1.13
ZNF404-201ENST00000324394 C6orf229H3BNL8 230 aa8.01□□□□□ -1.13
ZNF404-201ENST00000324394 CFAP99D6REC4 459 aa8□□□□□ -1.13
ZNF404-201ENST00000324394 PUS10Q3MIT2 529 aaKnown RBP8□□□□□ -1.13
ZNF404-201ENST00000324394 EIF4ENIF1Q9NRA8 985 aaKnown RBP8□□□□□ -1.13
ZNF404-201ENST00000324394 KMT5BQ4FZB7 885 aa7.99□□□□□ -1.13
ZNF404-201ENST00000324394 CCDC82Q8N4S0 544 aa7.99□□□□□ -1.13
ZNF404-201ENST00000324394 TSC1Q92574 1164 aa7.99□□□□□ -1.13
ZNF404-201ENST00000324394 IL21Q9HBE4 155 aa7.99□□□□□ -1.13
ZNF404-201ENST00000324394 TBC1D2BQ9UPU7 963 aa7.99□□□□□ -1.13
ZNF404-201ENST00000324394 PPP4CP60510 307 aa7.99□□□□□ -1.13
ZNF404-201ENST00000324394 GJD4Q96KN9 370 aaPredicted RBP7.99□□□□□ -1.13
ZNF404-201ENST00000324394 SOCS7O14512 581 aa7.98□□□□□ -1.13
ZNF404-201ENST00000324394 MORN1Q5T089 497 aa7.98□□□□□ -1.13
ZNF404-201ENST00000324394 HMX1Q9NP08 348 aaPredicted RBP7.98□□□□□ -1.13
ZNF404-201ENST00000324394 ZNF330Q9Y3S2 320 aaPredicted RBP7.98□□□□□ -1.13
ZNF404-201ENST00000324394 ACTN4O43707 911 aaKnown RBP7.97□□□□□ -1.13
ZNF404-201ENST00000324394 ABL2P42684 1182 aa7.97□□□□□ -1.13
ZNF404-201ENST00000324394 SLC27A5Q9Y2P5 690 aa7.97□□□□□ -1.13
ZNF404-201ENST00000324394 HELBQ8NG08 1087 aaPredicted RBP7.96□□□□□ -1.13
ZNF404-201ENST00000324394 LRRN4Q8WUT4 740 aa7.96□□□□□ -1.13
ZNF404-201ENST00000324394 PRR7Q8TB68 274 aa7.95□□□□□ -1.14
ZNF404-201ENST00000324394 MTRQ99707 1265 aa7.95□□□□□ -1.14
ZNF404-201ENST00000324394 TRIM34Q9BYJ4 488 aa7.95□□□□□ -1.14
ZNF404-201ENST00000324394 APLP1P51693 650 aa7.94□□□□□ -1.14
ZNF404-201ENST00000324394 TREML4Q6UXN2 200 aa7.94□□□□□ -1.14
ZNF404-201ENST00000324394 NECTIN2Q92692 538 aa7.94□□□□□ -1.14
ZNF404-201ENST00000324394 EPS8L1Q8TE68 723 aa7.94□□□□□ -1.14
ZNF404-201ENST00000324394 PRM3Q9NNZ6 103 aa7.94□□□□□ -1.14
ZNF404-201ENST00000324394 PER1O15534 1290 aaPredicted RBP7.93□□□□□ -1.14
ZNF404-201ENST00000324394 GGCXP38435 758 aa7.93□□□□□ -1.14
ZNF404-201ENST00000324394 RETREG3Q86VR2 466 aa7.93□□□□□ -1.14
ZNF404-201ENST00000324394 GPR37L1O60883 481 aa7.92□□□□□ -1.14
ZNF404-201ENST00000324394 BLOC1S3Q6QNY0 202 aa7.92□□□□□ -1.14
ZNF404-201ENST00000324394 RNF19BQ6ZMZ0 732 aa7.92□□□□□ -1.14
ZNF404-201ENST00000324394 NDUFB9Q9Y6M9 179 aa7.92□□□□□ -1.14
ZNF404-201ENST00000324394 POM121CA8CG34 1229 aa7.92□□□□□ -1.14
ZNF404-201ENST00000324394 DGAT1O75907 488 aa7.92□□□□□ -1.14
ZNF404-201ENST00000324394 IRF5Q13568 498 aa7.92□□□□□ -1.14
ZNF404-201ENST00000324394 PKDCCQ504Y2 493 aa7.92□□□□□ -1.14
ZNF404-201ENST00000324394 PRR14Q9BWN1 585 aa7.92□□□□□ -1.14
ZNF404-201ENST00000324394 MYT1Q01538 1121 aa7.91□□□□□ -1.14
ZNF404-201ENST00000324394 Q3C1V9 767 aa7.91□□□□□ -1.14
ZNF404-201ENST00000324394 SCUBE3Q8IX30 993 aa7.91□□□□□ -1.14
ZNF404-201ENST00000324394 LCE2AQ5TA79 106 aaPredicted RBP7.9□□□□□ -1.14
ZNF404-201ENST00000324394 WWC1Q8IX03 1113 aa7.9□□□□□ -1.14
ZNF404-201ENST00000324394 PCDHB3Q9Y5E6 796 aa7.89□□□□□ -1.15
ZNF404-201ENST00000324394 NR6A1Q15406 480 aa7.89□□□□□ -1.15
ZNF404-201ENST00000324394 CCDC97Q96F63 343 aaPredicted RBP7.89□□□□□ -1.15
ZNF404-201ENST00000324394 SERPINA10Q9UK55 444 aa7.89□□□□□ -1.15
ZNF404-201ENST00000324394 BRICD5Q6PL45 260 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms