RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 NOP58Q9Y2X3 529 aaKnown RBP11□□□□□ -0.65
CD28-201ENST00000324106 ERC2O15083 957 aa11□□□□□ -0.65
CD28-201ENST00000324106 FAM184AQ8NB25 1140 aa11□□□□□ -0.65
CD28-201ENST00000324106 ATP6V1DQ9Y5K8 247 aa11□□□□□ -0.65
CD28-201ENST00000324106 RAD21O60216 631 aa10.99□□□□□ -0.65
CD28-201ENST00000324106 EHBP1L1Q8N3D4 1523 aa10.99□□□□□ -0.65
CD28-201ENST00000324106 ANKRD45Q5TZF3 282 aa10.99□□□□□ -0.65
CD28-201ENST00000324106 DHX16O60231 1041 aaKnown RBP10.99□□□□□ -0.65
CD28-201ENST00000324106 REC8O95072 547 aa10.99□□□□□ -0.65
CD28-201ENST00000324106 KCNH5Q8NCM2 988 aa10.99□□□□□ -0.65
CD28-201ENST00000324106 ATAD2Q6PL18 1390 aa10.99□□□□□ -0.65
CD28-201ENST00000324106 RTEL1-TNFRSF6BF6WH68 1400 aa10.99□□□□□ -0.65
CD28-201ENST00000324106 ERICH2A1L162 156 aa10.98□□□□□ -0.65
CD28-201ENST00000324106 HMOX1P09601 288 aa10.98□□□□□ -0.65
CD28-201ENST00000324106 AAMPQ13685 434 aa10.98□□□□□ -0.65
CD28-201ENST00000324106 TRIM29Q14134 588 aa10.98□□□□□ -0.65
CD28-201ENST00000324106 CCDC30Q5VVM6 783 aa10.98□□□□□ -0.65
CD28-201ENST00000324106 PBRM1Q86U86 1689 aa10.98□□□□□ -0.65
CD28-201ENST00000324106 NECTIN2Q92692 538 aa10.98□□□□□ -0.65
CD28-201ENST00000324106 SHROOM2Q13796 1616 aa10.98□□□□□ -0.65
CD28-201ENST00000324106 DZIP1LQ8IYY4 767 aaKnown RBP10.98□□□□□ -0.65
CD28-201ENST00000324106 BCL2L13Q9BXK5 485 aa10.98□□□□□ -0.65
CD28-201ENST00000324106 H3BQV1 296 aa10.97□□□□□ -0.65
CD28-201ENST00000324106 IFFO2Q5TF58 517 aa10.97□□□□□ -0.65
CD28-201ENST00000324106 EIF4G3O43432 1585 aaKnown RBP10.97□□□□□ -0.65
CD28-201ENST00000324106 URB2Q14146 1524 aaKnown RBP10.97□□□□□ -0.65
CD28-201ENST00000324106 HECW1Q76N89 1606 aa10.97□□□□□ -0.65
CD28-201ENST00000324106 CPLX1O14810 134 aa10.97□□□□□ -0.65
CD28-201ENST00000324106 GNAI3P08754 354 aa10.97□□□□□ -0.65
CD28-201ENST00000324106 CABP4P57796 275 aa10.97□□□□□ -0.65
CD28-201ENST00000324106 CCDC47Q96A33 483 aaKnown RBP10.97□□□□□ -0.65
CD28-201ENST00000324106 ABCA5Q8WWZ7 1642 aa10.97□□□□□ -0.65
CD28-201ENST00000324106 AIMP1Q12904 312 aaKnown RBP10.97□□□□□ -0.65
CD28-201ENST00000324106 CDK19Q9BWU1 502 aa10.97□□□□□ -0.65
CD28-201ENST00000324106 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.97□□□□□ -0.65
CD28-201ENST00000324106 PPP1R1BQ9UD71 204 aaPredicted RBP10.96□□□□□ -0.65
CD28-201ENST00000324106 CCDC61Q9Y6R9 512 aa10.96□□□□□ -0.65
CD28-201ENST00000324106 AKNAQ7Z591 1439 aa10.96□□□□□ -0.65
CD28-201ENST00000324106 UBTFL1P0CB47 393 aaPredicted RBP10.96□□□□□ -0.65
CD28-201ENST00000324106 CENPQQ7L2Z9 268 aaPredicted RBP10.96□□□□□ -0.65
CD28-201ENST00000324106 MTHFSP49914 203 aa10.96□□□□□ -0.66
CD28-201ENST00000324106 TBC1D2BQ9UPU7 963 aa10.96□□□□□ -0.66
CD28-201ENST00000324106 ZNF530Q6P9A1 599 aaPredicted RBP10.95□□□□□ -0.66
CD28-201ENST00000324106 CCDC43Q96MW1 224 aaKnown RBP10.95□□□□□ -0.66
CD28-201ENST00000324106 GNL3LQ9NVN8 582 aaKnown RBP10.95□□□□□ -0.66
CD28-201ENST00000324106 ABCA10Q8WWZ4 1543 aa10.95□□□□□ -0.66
CD28-201ENST00000324106 DDX54Q8TDD1 881 aaKnown RBP10.95□□□□□ -0.66
CD28-201ENST00000324106 SYNJ1O43426 1573 aa10.95□□□□□ -0.66
CD28-201ENST00000324106 PRXQ9BXM0 1461 aa10.94□□□□□ -0.66
CD28-201ENST00000324106 CCAR1Q8IX12 1150 aaKnown RBP10.94□□□□□ -0.66
CD28-201ENST00000324106 SPRYD3Q8NCJ5 442 aa10.94□□□□□ -0.66
CD28-201ENST00000324106 NEUROD6Q96NK8 337 aa10.94□□□□□ -0.66
CD28-201ENST00000324106 KIAA1107Q9UPP5 1409 aa10.94□□□□□ -0.66
CD28-201ENST00000324106 RALYLQ86SE5 291 aaKnown RBP10.94□□□□□ -0.66
CD28-201ENST00000324106 EPRSP07814 1512 aaKnown RBP10.94□□□□□ -0.66
CD28-201ENST00000324106 LRPPRCP42704 1394 aaKnown RBP10.94□□□□□ -0.66
CD28-201ENST00000324106 PHF14O94880 888 aa10.93□□□□□ -0.66
CD28-201ENST00000324106 CABP1Q9NZU7 370 aa10.93□□□□□ -0.66
CD28-201ENST00000324106 TOP2BQ02880 1626 aa10.93□□□□□ -0.66
CD28-201ENST00000324106 CLASRPQ8N2M8 674 aaKnown RBP10.93□□□□□ -0.66
CD28-201ENST00000324106 TPM2P07951 284 aa10.92□□□□□ -0.66
CD28-201ENST00000324106 MSNP26038 577 aaKnown RBP10.92□□□□□ -0.66
CD28-201ENST00000324106 ZBED9Q6R2W3 1325 aa10.92□□□□□ -0.66
CD28-201ENST00000324106 DENND4BO75064 1496 aaPredicted RBP10.92□□□□□ -0.66
CD28-201ENST00000324106 SLC3A2P08195 630 aaKnown RBP10.92□□□□□ -0.66
CD28-201ENST00000324106 CCDC27Q2M243 656 aa10.92□□□□□ -0.66
CD28-201ENST00000324106 CADPS2Q86UW7 1296 aa10.92□□□□□ -0.66
CD28-201ENST00000324106 CHD1O14646 1710 aa10.92□□□□□ -0.66
CD28-201ENST00000324106 DAPK1P53355 1430 aa10.92□□□□□ -0.66
CD28-201ENST00000324106 PLB1Q6P1J6 1458 aa10.92□□□□□ -0.66
CD28-201ENST00000324106 ERBINQ96RT1 1412 aa10.92□□□□□ -0.66
CD28-201ENST00000324106 COG6Q9Y2V7 657 aa10.92□□□□□ -0.66
CD28-201ENST00000324106 ADGRL1O94910 1474 aa10.91□□□□□ -0.66
CD28-201ENST00000324106 TOM1O60784 492 aa10.91□□□□□ -0.66
CD28-201ENST00000324106 PRKAR2BP31323 418 aa10.91□□□□□ -0.66
CD28-201ENST00000324106 SAFBQ15424 915 aaKnown RBP eCLIP10.91□□□□□ -0.66
CD28-201ENST00000324106 NFXL1Q6ZNB6 911 aa10.91□□□□□ -0.66
CD28-201ENST00000324106 CCDC7Q96M83 1385 aa10.91□□□□□ -0.66
CD28-201ENST00000324106 CCDC141Q6ZP82 1450 aa10.91□□□□□ -0.66
CD28-201ENST00000324106 TPD52L1Q16890 204 aaPredicted RBP10.91□□□□□ -0.66
CD28-201ENST00000324106 NOL8Q76FK4 1167 aaKnown RBP10.91□□□□□ -0.66
CD28-201ENST00000324106 GRIN2AQ12879 1464 aa10.91□□□□□ -0.66
CD28-201ENST00000324106 WASHC4Q2M389 1173 aa10.91□□□□□ -0.66
CD28-201ENST00000324106 TSR1Q2NL82 804 aaKnown RBP10.91□□□□□ -0.66
CD28-201ENST00000324106 IQGAP2Q13576 1575 aa10.91□□□□□ -0.66
CD28-201ENST00000324106 SART3Q15020 963 aaKnown RBP10.9□□□□□ -0.66
CD28-201ENST00000324106 ERC1Q8IUD2 1116 aa10.9□□□□□ -0.66
CD28-201ENST00000324106 HDGFL1Q5TGJ6 251 aa10.9□□□□□ -0.66
CD28-201ENST00000324106 SULT6B1Q6IMI4 303 aa10.9□□□□□ -0.66
CD28-201ENST00000324106 NOC3LQ8WTT2 800 aaKnown RBP10.9□□□□□ -0.66
CD28-201ENST00000324106 NGLY1Q96IV0 654 aa10.9□□□□□ -0.66
CD28-201ENST00000324106 KIF7Q2M1P5 1343 aa10.9□□□□□ -0.66
CD28-201ENST00000324106 TPM3P06753 285 aa10.9□□□□□ -0.66
CD28-201ENST00000324106 PRM3Q9NNZ6 103 aa10.9□□□□□ -0.66
CD28-201ENST00000324106 CNTLNQ9NXG0 1405 aa10.89□□□□□ -0.67
CD28-201ENST00000324106 FAM177BA6PVY3 158 aa10.89□□□□□ -0.67
CD28-201ENST00000324106 STARD3NLO95772 234 aa10.89□□□□□ -0.67
CD28-201ENST00000324106 TEX14Q8IWB6 1497 aa10.89□□□□□ -0.67
CD28-201ENST00000324106 ARAP1Q96P48 1450 aa10.89□□□□□ -0.67
CD28-201ENST00000324106 XBP1P17861 261 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms