RNA–Protein interactions for RNA: ENST00000314088.6

HIST1H2AC-201, Transcript of histone cluster 1 H2A family member c, humanhuman

TSL 1 (best)

Gene HIST1H2AC, Length 1,668 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AC-201ENST00000314088 SENP3Q9H4L4 574 aaPredicted RBP23.46■■□□□ 1.35
HIST1H2AC-201ENST00000314088 ADAMTS13Q76LX8 1427 aa23.46■■□□□ 1.35
HIST1H2AC-201ENST00000314088 DIP2AQ14689 1571 aa23.45■■□□□ 1.34
HIST1H2AC-201ENST00000314088 ALKQ9UM73 1620 aa23.44■■□□□ 1.34
HIST1H2AC-201ENST00000314088 EIF3AQ14152 1382 aaKnown RBP23.43■■□□□ 1.34
HIST1H2AC-201ENST00000314088 SETD1AO15047 1707 aaKnown RBP23.43■■□□□ 1.34
HIST1H2AC-201ENST00000314088 C14orf93Q9H972 538 aaKnown RBP23.42■■□□□ 1.34
HIST1H2AC-201ENST00000314088 CFAP70Q5T0N1 1121 aa23.41■■□□□ 1.34
HIST1H2AC-201ENST00000314088 SLC26A8Q96RN1 970 aa23.41■■□□□ 1.34
HIST1H2AC-201ENST00000314088 PPP4R2Q9NY27 417 aa23.41■■□□□ 1.34
HIST1H2AC-201ENST00000314088 NUDCQ9Y266 331 aa23.41■■□□□ 1.34
HIST1H2AC-201ENST00000314088 TBX22Q9Y458 520 aa23.39■■□□□ 1.34
HIST1H2AC-201ENST00000314088 RNF123Q5XPI4 1314 aa23.39■■□□□ 1.33
HIST1H2AC-201ENST00000314088 SOCS7O14512 581 aa23.38■■□□□ 1.33
HIST1H2AC-201ENST00000314088 ASXL1Q8IXJ9 1541 aa23.37■■□□□ 1.33
HIST1H2AC-201ENST00000314088 ZNF335Q9H4Z2 1342 aaPredicted RBP23.37■■□□□ 1.33
HIST1H2AC-201ENST00000314088 ADGRB1O14514 1584 aa23.35■■□□□ 1.33
HIST1H2AC-201ENST00000314088 METP08581 1390 aa23.35■■□□□ 1.33
HIST1H2AC-201ENST00000314088 NPC1L1Q9UHC9 1359 aa23.35■■□□□ 1.33
HIST1H2AC-201ENST00000314088 PDE3BQ13370 1112 aa23.34■■□□□ 1.33
HIST1H2AC-201ENST00000314088 PANK3Q9H999 370 aa23.34■■□□□ 1.33
HIST1H2AC-201ENST00000314088 PIK3R4Q99570 1358 aa23.33■■□□□ 1.33
HIST1H2AC-201ENST00000314088 TMEM132EQ6IEE7 984 aa23.32■■□□□ 1.32
HIST1H2AC-201ENST00000314088 SBNO2Q9Y2G9 1366 aa23.31■■□□□ 1.32
HIST1H2AC-201ENST00000314088 CHD2O14647 1828 aaKnown RBP23.29■■□□□ 1.32
HIST1H2AC-201ENST00000314088 YTHDC2Q9H6S0 1430 aaKnown RBP23.29■■□□□ 1.32
HIST1H2AC-201ENST00000314088 PTPRUQ92729 1446 aa23.28■■□□□ 1.32
HIST1H2AC-201ENST00000314088 NWD1Q149M9 1564 aa23.27■■□□□ 1.32
HIST1H2AC-201ENST00000314088 XRN1Q8IZH2 1706 aaKnown RBP23.27■■□□□ 1.32
HIST1H2AC-201ENST00000314088 MYT1Q01538 1121 aa23.26■■□□□ 1.31
HIST1H2AC-201ENST00000314088 KNDC1Q76NI1 1749 aa23.25■■□□□ 1.31
HIST1H2AC-201ENST00000314088 BLMP54132 1417 aaPredicted RBP23.25■■□□□ 1.31
HIST1H2AC-201ENST00000314088 TECPR2O15040 1411 aa23.24■■□□□ 1.31
HIST1H2AC-201ENST00000314088 ABCC11Q96J66 1382 aa23.24■■□□□ 1.31
HIST1H2AC-201ENST00000314088 UBAP1LF5GYI3 381 aa23.24■■□□□ 1.31
HIST1H2AC-201ENST00000314088 KCNA6P17658 529 aa23.24■■□□□ 1.31
HIST1H2AC-201ENST00000314088 AMOTL2Q9Y2J4 779 aa23.24■■□□□ 1.31
HIST1H2AC-201ENST00000314088 KNSTRNQ9Y448 316 aa23.24■■□□□ 1.31
HIST1H2AC-201ENST00000314088 STK26Q9P289 416 aa23.23■■□□□ 1.31
HIST1H2AC-201ENST00000314088 CPS1P31327 1500 aa23.22■■□□□ 1.31
HIST1H2AC-201ENST00000314088 DLC1Q96QB1 1528 aa23.22■■□□□ 1.31
HIST1H2AC-201ENST00000314088 STRCP1A6NGW2 1772 aa23.21■■□□□ 1.31
HIST1H2AC-201ENST00000314088 NKTRP30414 1462 aaKnown RBP23.21■■□□□ 1.31
HIST1H2AC-201ENST00000314088 PTCH1Q13635 1447 aa23.2■■□□□ 1.31
HIST1H2AC-201ENST00000314088 CNGB1Q14028 1251 aaPredicted RBP23.2■■□□□ 1.3
HIST1H2AC-201ENST00000314088 TRAK1Q9UPV9 953 aa23.2■■□□□ 1.3
HIST1H2AC-201ENST00000314088 ARHGEF28Q8N1W1 1705 aaKnown RBP23.2■■□□□ 1.3
HIST1H2AC-201ENST00000314088 AMER1Q5JTC6 1135 aaPredicted RBP23.19■■□□□ 1.3
HIST1H2AC-201ENST00000314088 MYOM1P52179 1685 aa23.19■■□□□ 1.3
HIST1H2AC-201ENST00000314088 ROBO2Q9HCK4 1378 aa23.17■■□□□ 1.3
HIST1H2AC-201ENST00000314088 IRX6P78412 446 aaPredicted RBP23.17■■□□□ 1.3
HIST1H2AC-201ENST00000314088 CC2D1BQ5T0F9 858 aaKnown RBP23.17■■□□□ 1.3
HIST1H2AC-201ENST00000314088 FAM135BQ49AJ0 1406 aa23.17■■□□□ 1.3
HIST1H2AC-201ENST00000314088 SIRT1Q96EB6 747 aa23.16■■□□□ 1.3
HIST1H2AC-201ENST00000314088 PUS7Q96PZ0 661 aaKnown RBP23.15■■□□□ 1.3
HIST1H2AC-201ENST00000314088 PRAM1Q96QH2 718 aa23.13■■□□□ 1.29
HIST1H2AC-201ENST00000314088 RBM19Q9Y4C8 960 aaKnown RBP23.13■■□□□ 1.29
HIST1H2AC-201ENST00000314088 PPP2R1AP30153 589 aa23.12■■□□□ 1.29
HIST1H2AC-201ENST00000314088 POGKQ9P215 609 aa23.11■■□□□ 1.29
HIST1H2AC-201ENST00000314088 PLEKHH1Q9ULM0 1364 aa23.11■■□□□ 1.29
HIST1H2AC-201ENST00000314088 WAPLQ7Z5K2 1190 aa23.1■■□□□ 1.29
HIST1H2AC-201ENST00000314088 CENPJQ9HC77 1338 aaPredicted RBP23.1■■□□□ 1.29
HIST1H2AC-201ENST00000314088 PROSER2Q86WR7 435 aaPredicted RBP23.09■■□□□ 1.29
HIST1H2AC-201ENST00000314088 QRICH2Q9H0J4 1663 aa23.09■■□□□ 1.29
HIST1H2AC-201ENST00000314088 LRRC7Q96NW7 1537 aa23.09■■□□□ 1.29
HIST1H2AC-201ENST00000314088 NGEFQ8N5V2 710 aa23.07■■□□□ 1.28
HIST1H2AC-201ENST00000314088 TMEM94Q12767 1356 aa23.07■■□□□ 1.28
HIST1H2AC-201ENST00000314088 SAFB2Q14151 953 aaKnown RBP eCLIP23.06■■□□□ 1.28
HIST1H2AC-201ENST00000314088 RCAN3Q9UKA8 241 aa23.06■■□□□ 1.28
HIST1H2AC-201ENST00000314088 NCOA3Q9Y6Q9 1424 aa23.05■■□□□ 1.28
HIST1H2AC-201ENST00000314088 HSPA1LP34931 641 aa23.05■■□□□ 1.28
HIST1H2AC-201ENST00000314088 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.05■■□□□ 1.28
HIST1H2AC-201ENST00000314088 RBM33Q96EV2 1170 aaKnown RBP23.04■■□□□ 1.28
HIST1H2AC-201ENST00000314088 XIRP1Q702N8 1843 aaKnown RBP23.04■■□□□ 1.28
HIST1H2AC-201ENST00000314088 TOM1O60784 492 aa23.03■■□□□ 1.28
HIST1H2AC-201ENST00000314088 RRP1P56182 461 aaKnown RBP23.03■■□□□ 1.28
HIST1H2AC-201ENST00000314088 NALCNQ8IZF0 1738 aa23.03■■□□□ 1.28
HIST1H2AC-201ENST00000314088 ADGRL3Q9HAR2 1447 aa23.03■■□□□ 1.28
HIST1H2AC-201ENST00000314088 WDR43Q15061 677 aaKnown RBP eCLIP23.03■■□□□ 1.28
HIST1H2AC-201ENST00000314088 ADGRB2O60241 1585 aa23.02■■□□□ 1.28
HIST1H2AC-201ENST00000314088 PIP4K2BP78356 416 aa23.01■■□□□ 1.27
HIST1H2AC-201ENST00000314088 B4GALNT3Q6L9W6 998 aa23.01■■□□□ 1.27
HIST1H2AC-201ENST00000314088 MINK1Q8N4C8 1332 aaPredicted RBP23.01■■□□□ 1.27
HIST1H2AC-201ENST00000314088 C14orf37Q86TY3 774 aa23■■□□□ 1.27
HIST1H2AC-201ENST00000314088 FANCIQ9NVI1 1328 aa23■■□□□ 1.27
HIST1H2AC-201ENST00000314088 ADAMTS8Q9UP79 889 aa23■■□□□ 1.27
HIST1H2AC-201ENST00000314088 USP32Q8NFA0 1604 aa22.99■■□□□ 1.27
HIST1H2AC-201ENST00000314088 MED1Q15648 1581 aaPredicted RBP22.99■■□□□ 1.27
HIST1H2AC-201ENST00000314088 CDC42BPGQ6DT37 1551 aa22.98■■□□□ 1.27
HIST1H2AC-201ENST00000314088 CCDC136Q96JN2 1154 aa22.97■■□□□ 1.27
HIST1H2AC-201ENST00000314088 MSH6P52701 1360 aa22.96■■□□□ 1.27
HIST1H2AC-201ENST00000314088 C19orf44Q9H6X5 657 aa22.96■■□□□ 1.27
HIST1H2AC-201ENST00000314088 ZNF521Q96K83 1311 aa22.96■■□□□ 1.27
HIST1H2AC-201ENST00000314088 TULP4Q9NRJ4 1543 aa22.96■■□□□ 1.27
HIST1H2AC-201ENST00000314088 POLR3AO14802 1390 aaPredicted RBP22.95■■□□□ 1.27
HIST1H2AC-201ENST00000314088 DCCP43146 1447 aa22.95■■□□□ 1.26
HIST1H2AC-201ENST00000314088 CARD14Q9BXL6 1004 aa22.94■■□□□ 1.26
HIST1H2AC-201ENST00000314088 EVC2Q86UK5 1308 aa22.93■■□□□ 1.26
HIST1H2AC-201ENST00000314088 NINLQ9Y2I6 1382 aa22.93■■□□□ 1.26
HIST1H2AC-201ENST00000314088 WASLO00401 505 aaPredicted RBP22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms