RNA–Protein interactions for RNA: ENST00000288139.9

CACNA1D-201, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACNA1D, Length 9,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-201ENST00000288139 ERCC6Q03468 1493 aa10.11□□□□□ -0.79
CACNA1D-201ENST00000288139 TUBB4AP04350 444 aa10.11□□□□□ -0.79
CACNA1D-201ENST00000288139 MAP3K9P80192 1104 aa10.11□□□□□ -0.79
CACNA1D-201ENST00000288139 EZRP15311 586 aaKnown RBP10.11□□□□□ -0.79
CACNA1D-201ENST00000288139 CCAR1Q8IX12 1150 aaKnown RBP10.11□□□□□ -0.79
CACNA1D-201ENST00000288139 TXLNBQ8N3L3 684 aa10.11□□□□□ -0.79
CACNA1D-201ENST00000288139 ZKSCAN1P17029 563 aaPredicted RBP10.11□□□□□ -0.79
CACNA1D-201ENST00000288139 INTS3Q68E01 1043 aaKnown RBP10.1□□□□□ -0.79
CACNA1D-201ENST00000288139 FAM107BQ9H098 131 aa10.1□□□□□ -0.79
CACNA1D-201ENST00000288139 ARHGEF12Q9NZN5 1544 aa10.1□□□□□ -0.79
CACNA1D-201ENST00000288139 CFTRP13569 1480 aa10.1□□□□□ -0.79
CACNA1D-201ENST00000288139 SRPK2P78362 688 aaKnown RBP10.09□□□□□ -0.79
CACNA1D-201ENST00000288139 PDCL3Q9H2J4 239 aa10.09□□□□□ -0.79
CACNA1D-201ENST00000288139 INCENPQ9NQS7 918 aa10.09□□□□□ -0.79
CACNA1D-201ENST00000288139 TUBB4BP68371 445 aa10.09□□□□□ -0.79
CACNA1D-201ENST00000288139 CC2D1BQ5T0F9 858 aaKnown RBP10.09□□□□□ -0.79
CACNA1D-201ENST00000288139 ARID3CA6NKF2 412 aa10.09□□□□□ -0.79
CACNA1D-201ENST00000288139 PIP4K2AP48426 406 aaPredicted RBP10.08□□□□□ -0.8
CACNA1D-201ENST00000288139 DESP17661 470 aa10.08□□□□□ -0.8
CACNA1D-201ENST00000288139 EPS15P42566 896 aa10.08□□□□□ -0.8
CACNA1D-201ENST00000288139 CPLX2Q6PUV4 134 aaKnown RBP10.08□□□□□ -0.8
CACNA1D-201ENST00000288139 ZSCAN30Q86W11 494 aa10.08□□□□□ -0.8
CACNA1D-201ENST00000288139 ZMYM4Q5VZL5 1548 aa10.08□□□□□ -0.8
CACNA1D-201ENST00000288139 DNAI2Q9GZS0 605 aa10.08□□□□□ -0.8
CACNA1D-201ENST00000288139 SF3A1Q15459 793 aaKnown RBP10.08□□□□□ -0.8
CACNA1D-201ENST00000288139 ANKRD50Q9ULJ7 1429 aa10.08□□□□□ -0.8
CACNA1D-201ENST00000288139 BECN2A8MW95 431 aa10.08□□□□□ -0.8
CACNA1D-201ENST00000288139 TERF1P54274 439 aa10.08□□□□□ -0.8
CACNA1D-201ENST00000288139 UBE2Q2Q8WVN8 375 aa10.08□□□□□ -0.8
CACNA1D-201ENST00000288139 KIAA1107Q9UPP5 1409 aa10.08□□□□□ -0.8
CACNA1D-201ENST00000288139 ARAP1Q96P48 1450 aa10.08□□□□□ -0.8
CACNA1D-201ENST00000288139 HOMER1Q86YM7 354 aa10.08□□□□□ -0.8
CACNA1D-201ENST00000288139 ESPNB1AK53 854 aa10.07□□□□□ -0.8
CACNA1D-201ENST00000288139 U2AF1L5P0DN76 240 aaPredicted RBP10.07□□□□□ -0.8
CACNA1D-201ENST00000288139 PPM1FP49593 454 aaPredicted RBP10.07□□□□□ -0.8
CACNA1D-201ENST00000288139 U2AF1Q01081 240 aaKnown RBP eCLIP10.07□□□□□ -0.8
CACNA1D-201ENST00000288139 C22orf23Q9BZE7 217 aa10.07□□□□□ -0.8
CACNA1D-201ENST00000288139 WDR97A6NE52 1622 aa10.07□□□□□ -0.8
CACNA1D-201ENST00000288139 GAPVD1Q14C86 1478 aa10.07□□□□□ -0.8
CACNA1D-201ENST00000288139 EVC2Q86UK5 1308 aa10.07□□□□□ -0.8
CACNA1D-201ENST00000288139 DZIP1LQ8IYY4 767 aaKnown RBP10.07□□□□□ -0.8
CACNA1D-201ENST00000288139 CCDC9Q9Y3X0 531 aaKnown RBP10.07□□□□□ -0.8
CACNA1D-201ENST00000288139 HSP90AB2PQ58FF8 381 aa10.07□□□□□ -0.8
CACNA1D-201ENST00000288139 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.07□□□□□ -0.8
CACNA1D-201ENST00000288139 HMGB1P1B2RPK0 211 aaPredicted RBP10.06□□□□□ -0.8
CACNA1D-201ENST00000288139 ABCC11Q96J66 1382 aa10.06□□□□□ -0.8
CACNA1D-201ENST00000288139 DNMBPQ6XZF7 1577 aa10.06□□□□□ -0.8
CACNA1D-201ENST00000288139 MFAP1P55081 439 aaKnown RBP10.06□□□□□ -0.8
CACNA1D-201ENST00000288139 MEX3CQ5U5Q3 659 aaKnown RBP10.06□□□□□ -0.8
CACNA1D-201ENST00000288139 PTPN23Q9H3S7 1636 aa10.06□□□□□ -0.8
CACNA1D-201ENST00000288139 CTTNBP2Q8WZ74 1663 aa10.06□□□□□ -0.8
CACNA1D-201ENST00000288139 CAMSAP2Q08AD1 1489 aa10.06□□□□□ -0.8
CACNA1D-201ENST00000288139 NEFHP12036 1026 aa10.06□□□□□ -0.8
CACNA1D-201ENST00000288139 HIP1O00291 1037 aa10.06□□□□□ -0.8
CACNA1D-201ENST00000288139 CDC45O75419 566 aa10.06□□□□□ -0.8
CACNA1D-201ENST00000288139 GCC1Q96CN9 775 aa10.06□□□□□ -0.8
CACNA1D-201ENST00000288139 RGL3Q3MIN7 710 aa10.05□□□□□ -0.8
CACNA1D-201ENST00000288139 NEMFO60524 1076 aa10.05□□□□□ -0.8
CACNA1D-201ENST00000288139 CHMP3Q9Y3E7 222 aa10.05□□□□□ -0.8
CACNA1D-201ENST00000288139 ZFYVE27Q5T4F4 411 aa10.05□□□□□ -0.8
CACNA1D-201ENST00000288139 FANCD2Q9BXW9 1451 aa10.05□□□□□ -0.8
CACNA1D-201ENST00000288139 U2SURPO15042 1029 aaKnown RBP10.05□□□□□ -0.8
CACNA1D-201ENST00000288139 SYNE3Q6ZMZ3 975 aa10.05□□□□□ -0.8
CACNA1D-201ENST00000288139 ZNF771Q7L3S4 317 aaPredicted RBP10.05□□□□□ -0.8
CACNA1D-201ENST00000288139 PCMTD1Q96MG8 357 aaPredicted RBP10.05□□□□□ -0.8
CACNA1D-201ENST00000288139 RUNDC1Q96C34 613 aa10.04□□□□□ -0.8
CACNA1D-201ENST00000288139 SEPT7Q16181 437 aaKnown RBP10.04□□□□□ -0.8
CACNA1D-201ENST00000288139 GZF1Q9H116 711 aaPredicted RBP10.04□□□□□ -0.8
CACNA1D-201ENST00000288139 PPM1EQ8WY54 764 aa10.04□□□□□ -0.8
CACNA1D-201ENST00000288139 KIF3BO15066 747 aa10.04□□□□□ -0.8
CACNA1D-201ENST00000288139 CCAR2Q8N163 923 aaKnown RBP10.04□□□□□ -0.8
CACNA1D-201ENST00000288139 NCOA1Q15788 1441 aa10.04□□□□□ -0.8
CACNA1D-201ENST00000288139 GOLGA6L7A0A1B0GV03 622 aa10.04□□□□□ -0.8
CACNA1D-201ENST00000288139 DYNC1I1O14576 645 aa10.04□□□□□ -0.8
CACNA1D-201ENST00000288139 IQCEQ6IPM2 695 aa10.04□□□□□ -0.8
CACNA1D-201ENST00000288139 ZNF710Q8N1W2 664 aa10.03□□□□□ -0.8
CACNA1D-201ENST00000288139 PRIMPOLQ96LW4 560 aa10.03□□□□□ -0.8
CACNA1D-201ENST00000288139 ANKRD30BQ9BXX2 1392 aa10.03□□□□□ -0.8
CACNA1D-201ENST00000288139 GPRASP1Q5JY77 1395 aa10.03□□□□□ -0.8
CACNA1D-201ENST00000288139 ERC2O15083 957 aa10.03□□□□□ -0.8
CACNA1D-201ENST00000288139 GNAI1P63096 354 aa10.03□□□□□ -0.8
CACNA1D-201ENST00000288139 ZNF330Q9Y3S2 320 aaPredicted RBP10.03□□□□□ -0.8
CACNA1D-201ENST00000288139 NSD2O96028 1365 aa10.02□□□□□ -0.8
CACNA1D-201ENST00000288139 ERLIN1O75477 346 aa10.02□□□□□ -0.81
CACNA1D-201ENST00000288139 DYDC1Q8WWB3 177 aa10.02□□□□□ -0.81
CACNA1D-201ENST00000288139 EIF3JO75822 258 aaKnown RBP10.02□□□□□ -0.81
CACNA1D-201ENST00000288139 MICAL3Q7RTP6 2002 aa10.02□□□□□ -0.81
CACNA1D-201ENST00000288139 WDR63Q8IWG1 891 aa10.02□□□□□ -0.81
CACNA1D-201ENST00000288139 RALGAPBQ86X10 1494 aa10.02□□□□□ -0.81
CACNA1D-201ENST00000288139 IGF1RP08069 1367 aa10.02□□□□□ -0.81
CACNA1D-201ENST00000288139 NUP160Q12769 1436 aa10.02□□□□□ -0.81
CACNA1D-201ENST00000288139 TRAK2O60296 914 aa10.02□□□□□ -0.81
CACNA1D-201ENST00000288139 SRCIN1Q9C0H9 1055 aa10.02□□□□□ -0.81
CACNA1D-201ENST00000288139 FAM193AP78312 1265 aa10.02□□□□□ -0.81
CACNA1D-201ENST00000288139 NKTRP30414 1462 aaKnown RBP10.02□□□□□ -0.81
CACNA1D-201ENST00000288139 PSMA5P28066 241 aa10.01□□□□□ -0.81
CACNA1D-201ENST00000288139 ST20-MTHFSA0A0A6YYL1 179 aa10.01□□□□□ -0.81
CACNA1D-201ENST00000288139 CSB-PGBD3P0DP91 1061 aa10.01□□□□□ -0.81
CACNA1D-201ENST00000288139 PRKCSHP14314 528 aaPredicted RBP10.01□□□□□ -0.81
CACNA1D-201ENST00000288139 BCCIPQ9P287 314 aaKnown RBP eCLIP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms