RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 HAP1P54257 671 aaPredicted RBP10.16□□□□□ -0.78
TRIM42-201ENST00000286349 TMF1P82094 1093 aa10.16□□□□□ -0.78
TRIM42-201ENST00000286349 HNRNPUQ00839 825 aaKnown RBP eCLIP10.16□□□□□ -0.78
TRIM42-201ENST00000286349 RALBP1Q15311 655 aa10.16□□□□□ -0.78
TRIM42-201ENST00000286349 BCANQ96GW7 911 aa10.16□□□□□ -0.78
TRIM42-201ENST00000286349 POLR3GLQ9BT43 218 aa10.16□□□□□ -0.78
TRIM42-201ENST00000286349 EIF3AQ14152 1382 aaKnown RBP10.16□□□□□ -0.78
TRIM42-201ENST00000286349 NBPF1Q3BBV0 1214 aa10.16□□□□□ -0.78
TRIM42-201ENST00000286349 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.16□□□□□ -0.78
TRIM42-201ENST00000286349 NRXN1Q9ULB1 1477 aa10.16□□□□□ -0.78
TRIM42-201ENST00000286349 CDCA8Q53HL2 280 aa10.15□□□□□ -0.78
TRIM42-201ENST00000286349 EID1Q9Y6B2 187 aa10.15□□□□□ -0.78
TRIM42-201ENST00000286349 SCAF11Q99590 1463 aaKnown RBP10.15□□□□□ -0.78
TRIM42-201ENST00000286349 IQGAP1P46940 1657 aa10.15□□□□□ -0.79
TRIM42-201ENST00000286349 HDGFP51858 240 aaKnown RBP10.14□□□□□ -0.79
TRIM42-201ENST00000286349 CFAP70Q5T0N1 1121 aa10.14□□□□□ -0.79
TRIM42-201ENST00000286349 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.14□□□□□ -0.79
TRIM42-201ENST00000286349 TESK2Q96S53 571 aa10.14□□□□□ -0.79
TRIM42-201ENST00000286349 PPLO60437 1756 aa10.14□□□□□ -0.79
TRIM42-201ENST00000286349 PLEKHG1Q9ULL1 1385 aa10.14□□□□□ -0.79
TRIM42-201ENST00000286349 IFT172Q9UG01 1749 aa10.14□□□□□ -0.79
TRIM42-201ENST00000286349 SLC26A8Q96RN1 970 aa10.13□□□□□ -0.79
TRIM42-201ENST00000286349 C14orf93Q9H972 538 aaKnown RBP10.13□□□□□ -0.79
TRIM42-201ENST00000286349 PIK3C2GO75747 1445 aa10.13□□□□□ -0.79
TRIM42-201ENST00000286349 ZBED9Q6R2W3 1325 aa10.13□□□□□ -0.79
TRIM42-201ENST00000286349 ADAMTS13Q76LX8 1427 aa10.13□□□□□ -0.79
TRIM42-201ENST00000286349 BRD4O60885 1362 aaPredicted RBP10.12□□□□□ -0.79
TRIM42-201ENST00000286349 MED14O60244 1454 aa10.12□□□□□ -0.79
TRIM42-201ENST00000286349 MYBBP1AQ9BQG0 1328 aaKnown RBP10.12□□□□□ -0.79
TRIM42-201ENST00000286349 TMEM132EQ6IEE7 984 aa10.11□□□□□ -0.79
TRIM42-201ENST00000286349 STRCQ7RTU9 1775 aa10.11□□□□□ -0.79
TRIM42-201ENST00000286349 FAM9BQ8IZU0 186 aa10.11□□□□□ -0.79
TRIM42-201ENST00000286349 METP08581 1390 aa10.11□□□□□ -0.79
TRIM42-201ENST00000286349 NRXN3Q9Y4C0 1643 aa10.11□□□□□ -0.79
TRIM42-201ENST00000286349 NPHP4O75161 1426 aaPredicted RBP10.11□□□□□ -0.79
TRIM42-201ENST00000286349 TBX22Q9Y458 520 aa10.1□□□□□ -0.79
TRIM42-201ENST00000286349 DISP3Q9P2K9 1392 aa10.1□□□□□ -0.79
TRIM42-201ENST00000286349 CCDC184Q52MB2 194 aa10.1□□□□□ -0.79
TRIM42-201ENST00000286349 SETBP1Q9Y6X0 1596 aa10.1□□□□□ -0.79
TRIM42-201ENST00000286349 CDK11BP21127 795 aaKnown RBP10.09□□□□□ -0.79
TRIM42-201ENST00000286349 TMC1Q8TDI8 760 aa10.09□□□□□ -0.79
TRIM42-201ENST00000286349 ALKQ9UM73 1620 aa10.09□□□□□ -0.79
TRIM42-201ENST00000286349 PARD3Q8TEW0 1356 aa10.09□□□□□ -0.79
TRIM42-201ENST00000286349 HSP90B1P14625 803 aaKnown RBP10.09□□□□□ -0.79
TRIM42-201ENST00000286349 PTPRUQ92729 1446 aa10.08□□□□□ -0.8
TRIM42-201ENST00000286349 NLRP13Q86W25 1043 aa10.08□□□□□ -0.8
TRIM42-201ENST00000286349 NAP1L5Q96NT1 182 aaPredicted RBP10.08□□□□□ -0.8
TRIM42-201ENST00000286349 BCCIPQ9P287 314 aaKnown RBP eCLIP10.08□□□□□ -0.8
TRIM42-201ENST00000286349 ASXL1Q8IXJ9 1541 aa10.08□□□□□ -0.8
TRIM42-201ENST00000286349 PER1O15534 1290 aaPredicted RBP10.07□□□□□ -0.8
TRIM42-201ENST00000286349 INSRP06213 1382 aa10.07□□□□□ -0.8
TRIM42-201ENST00000286349 ADGRB1O14514 1584 aa10.07□□□□□ -0.8
TRIM42-201ENST00000286349 SBNO2Q9Y2G9 1366 aa10.07□□□□□ -0.8
TRIM42-201ENST00000286349 FKBP8Q14318 412 aa10.06□□□□□ -0.8
TRIM42-201ENST00000286349 PAXIP1Q6ZW49 1069 aaPredicted RBP10.06□□□□□ -0.8
TRIM42-201ENST00000286349 PNISRQ8TF01 805 aaKnown RBP10.06□□□□□ -0.8
TRIM42-201ENST00000286349 LRPPRCP42704 1394 aaKnown RBP10.06□□□□□ -0.8
TRIM42-201ENST00000286349 SETD1AO15047 1707 aaKnown RBP10.05□□□□□ -0.8
TRIM42-201ENST00000286349 STK26Q9P289 416 aa10.05□□□□□ -0.8
TRIM42-201ENST00000286349 PANK3Q9H999 370 aa10.05□□□□□ -0.8
TRIM42-201ENST00000286349 AMOTL2Q9Y2J4 779 aa10.04□□□□□ -0.8
TRIM42-201ENST00000286349 NPC1L1Q9UHC9 1359 aa10.04□□□□□ -0.8
TRIM42-201ENST00000286349 VSIG10Q8N0Z9 540 aa10.04□□□□□ -0.8
TRIM42-201ENST00000286349 TRAK1Q9UPV9 953 aa10.04□□□□□ -0.8
TRIM42-201ENST00000286349 KCNA6P17658 529 aa10.03□□□□□ -0.8
TRIM42-201ENST00000286349 KNSTRNQ9Y448 316 aa10.03□□□□□ -0.8
TRIM42-201ENST00000286349 DMRT2Q9Y5R5 561 aa10.03□□□□□ -0.8
TRIM42-201ENST00000286349 YTHDC2Q9H6S0 1430 aaKnown RBP10.03□□□□□ -0.8
TRIM42-201ENST00000286349 ZNF335Q9H4Z2 1342 aaPredicted RBP10.03□□□□□ -0.8
TRIM42-201ENST00000286349 SMG6Q86US8 1419 aaKnown RBP10.03□□□□□ -0.8
TRIM42-201ENST00000286349 ABCC11Q96J66 1382 aa10.02□□□□□ -0.8
TRIM42-201ENST00000286349 WAPLQ7Z5K2 1190 aa10.02□□□□□ -0.8
TRIM42-201ENST00000286349 PIK3R4Q99570 1358 aa10.02□□□□□ -0.81
TRIM42-201ENST00000286349 ROBO2Q9HCK4 1378 aa10.02□□□□□ -0.81
TRIM42-201ENST00000286349 RBM33Q96EV2 1170 aaKnown RBP10.02□□□□□ -0.81
TRIM42-201ENST00000286349 PLEKHH1Q9ULM0 1364 aa10.02□□□□□ -0.81
TRIM42-201ENST00000286349 DIP2AQ14689 1571 aa10.01□□□□□ -0.81
TRIM42-201ENST00000286349 CENPJQ9HC77 1338 aaPredicted RBP10□□□□□ -0.81
TRIM42-201ENST00000286349 TECPR2O15040 1411 aa10□□□□□ -0.81
TRIM42-201ENST00000286349 CNGB1Q14028 1251 aaPredicted RBP10□□□□□ -0.81
TRIM42-201ENST00000286349 SIRT1Q96EB6 747 aa10□□□□□ -0.81
TRIM42-201ENST00000286349 PUS7Q96PZ0 661 aaKnown RBP10□□□□□ -0.81
TRIM42-201ENST00000286349 PRAM1Q96QH2 718 aa10□□□□□ -0.81
TRIM42-201ENST00000286349 MYOM1P52179 1685 aa9.99□□□□□ -0.81
TRIM42-201ENST00000286349 STRCP1A6NGW2 1772 aa9.99□□□□□ -0.81
TRIM42-201ENST00000286349 NUDCQ9Y266 331 aa9.99□□□□□ -0.81
TRIM42-201ENST00000286349 PDE3BQ13370 1112 aa9.98□□□□□ -0.81
TRIM42-201ENST00000286349 SAFB2Q14151 953 aaKnown RBP eCLIP9.98□□□□□ -0.81
TRIM42-201ENST00000286349 CC2D1BQ5T0F9 858 aaKnown RBP9.98□□□□□ -0.81
TRIM42-201ENST00000286349 CHD2O14647 1828 aaKnown RBP9.98□□□□□ -0.81
TRIM42-201ENST00000286349 XRN1Q8IZH2 1706 aaKnown RBP9.97□□□□□ -0.81
TRIM42-201ENST00000286349 PROSER2Q86WR7 435 aaPredicted RBP9.97□□□□□ -0.81
TRIM42-201ENST00000286349 RBM19Q9Y4C8 960 aaKnown RBP9.97□□□□□ -0.81
TRIM42-201ENST00000286349 NWD1Q149M9 1564 aa9.97□□□□□ -0.81
TRIM42-201ENST00000286349 DLC1Q96QB1 1528 aa9.96□□□□□ -0.81
TRIM42-201ENST00000286349 BLMP54132 1417 aaPredicted RBP9.96□□□□□ -0.81
TRIM42-201ENST00000286349 FAM135BQ49AJ0 1406 aa9.96□□□□□ -0.81
TRIM42-201ENST00000286349 QRICH2Q9H0J4 1663 aa9.96□□□□□ -0.82
TRIM42-201ENST00000286349 PTCH1Q13635 1447 aa9.96□□□□□ -0.82
TRIM42-201ENST00000286349 LTBP4Q8N2S1 1624 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms