RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 TXLNBQ8N3L3 684 aa10.46□□□□□ -0.74
SCUBE3-201ENST00000274938 EID1Q9Y6B2 187 aa10.46□□□□□ -0.74
SCUBE3-201ENST00000274938 EIF3JO75822 258 aaKnown RBP10.46□□□□□ -0.74
SCUBE3-201ENST00000274938 PDCP20941 246 aa10.46□□□□□ -0.74
SCUBE3-201ENST00000274938 TEFQ10587 303 aa10.46□□□□□ -0.74
SCUBE3-201ENST00000274938 CCDC43Q96MW1 224 aaKnown RBP10.46□□□□□ -0.74
SCUBE3-201ENST00000274938 ST20-MTHFSA0A0A6YYL1 179 aa10.45□□□□□ -0.74
SCUBE3-201ENST00000274938 EVC2Q86UK5 1308 aa10.45□□□□□ -0.74
SCUBE3-201ENST00000274938 ELL2O00472 640 aaPredicted RBP10.45□□□□□ -0.74
SCUBE3-201ENST00000274938 RRP9O43818 475 aaKnown RBP10.45□□□□□ -0.74
SCUBE3-201ENST00000274938 AXDND1Q5T1B0 1012 aaPredicted RBP10.45□□□□□ -0.74
SCUBE3-201ENST00000274938 RALYLQ86SE5 291 aaKnown RBP10.45□□□□□ -0.74
SCUBE3-201ENST00000274938 EPS15P42566 896 aa10.45□□□□□ -0.74
SCUBE3-201ENST00000274938 CCDC144AA2RUR9 1427 aa10.45□□□□□ -0.74
SCUBE3-201ENST00000274938 APAF1O14727 1248 aa10.45□□□□□ -0.74
SCUBE3-201ENST00000274938 KINO60870 393 aaKnown RBP10.44□□□□□ -0.74
SCUBE3-201ENST00000274938 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.44□□□□□ -0.74
SCUBE3-201ENST00000274938 DHX57Q6P158 1386 aaKnown RBP10.44□□□□□ -0.74
SCUBE3-201ENST00000274938 GOLGA6L10A6NI86 522 aa10.44□□□□□ -0.74
SCUBE3-201ENST00000274938 CT47B1P0C2W7 299 aaPredicted RBP10.44□□□□□ -0.74
SCUBE3-201ENST00000274938 RABEP1Q15276 862 aa10.44□□□□□ -0.74
SCUBE3-201ENST00000274938 BAZ1AQ9NRL2 1556 aaPredicted RBP10.44□□□□□ -0.74
SCUBE3-201ENST00000274938 GNAI1P63096 354 aa10.44□□□□□ -0.74
SCUBE3-201ENST00000274938 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.44□□□□□ -0.74
SCUBE3-201ENST00000274938 FBXO3Q9UK99 471 aa10.44□□□□□ -0.74
SCUBE3-201ENST00000274938 DHX16O60231 1041 aaKnown RBP10.44□□□□□ -0.74
SCUBE3-201ENST00000274938 TTC5Q8N0Z6 440 aa10.44□□□□□ -0.74
SCUBE3-201ENST00000274938 CCDC112Q8NEF3 446 aa10.44□□□□□ -0.74
SCUBE3-201ENST00000274938 RUNDC1Q96C34 613 aa10.44□□□□□ -0.74
SCUBE3-201ENST00000274938 INCENPQ9NQS7 918 aa10.44□□□□□ -0.74
SCUBE3-201ENST00000274938 PDCL2Q8N4E4 241 aa10.44□□□□□ -0.74
SCUBE3-201ENST00000274938 ZNF396Q96N95 335 aaPredicted RBP10.44□□□□□ -0.74
SCUBE3-201ENST00000274938 DIAPH1O60610 1272 aaKnown RBP10.43□□□□□ -0.74
SCUBE3-201ENST00000274938 SMC2O95347 1197 aa10.43□□□□□ -0.74
SCUBE3-201ENST00000274938 ANKRD18AQ8IVF6 992 aa10.43□□□□□ -0.74
SCUBE3-201ENST00000274938 USP47Q96K76 1375 aa10.43□□□□□ -0.74
SCUBE3-201ENST00000274938 RNF214Q8ND24 703 aa10.43□□□□□ -0.74
SCUBE3-201ENST00000274938 CWC22Q9HCG8 908 aaKnown RBP10.43□□□□□ -0.74
SCUBE3-201ENST00000274938 CCDC18Q5T9S5 1454 aa10.43□□□□□ -0.74
SCUBE3-201ENST00000274938 KIF3BO15066 747 aa10.43□□□□□ -0.74
SCUBE3-201ENST00000274938 HSP90AB3PQ58FF7 597 aa10.43□□□□□ -0.74
SCUBE3-201ENST00000274938 LUC7LQ9NQ29 371 aaKnown RBP10.43□□□□□ -0.74
SCUBE3-201ENST00000274938 CCDC9Q9Y3X0 531 aaKnown RBP10.43□□□□□ -0.74
SCUBE3-201ENST00000274938 FBXW7Q969H0 707 aa10.42□□□□□ -0.74
SCUBE3-201ENST00000274938 LTV1Q96GA3 475 aaPredicted RBP10.42□□□□□ -0.74
SCUBE3-201ENST00000274938 MAGEC2Q9UBF1 373 aaPredicted RBP10.42□□□□□ -0.74
SCUBE3-201ENST00000274938 DACH1Q9UI36 760 aa10.42□□□□□ -0.74
SCUBE3-201ENST00000274938 HIP1O00291 1037 aa10.41□□□□□ -0.74
SCUBE3-201ENST00000274938 ZNHIT6Q9NWK9 470 aaKnown RBP10.41□□□□□ -0.74
SCUBE3-201ENST00000274938 ERCC6Q03468 1493 aa10.41□□□□□ -0.74
SCUBE3-201ENST00000274938 CCDC192P0DO97 292 aa10.41□□□□□ -0.74
SCUBE3-201ENST00000274938 IQCEQ6IPM2 695 aa10.41□□□□□ -0.74
SCUBE3-201ENST00000274938 CNTROBQ8N137 903 aa10.41□□□□□ -0.74
SCUBE3-201ENST00000274938 RIPK4P57078 832 aa10.41□□□□□ -0.74
SCUBE3-201ENST00000274938 LNPKQ9C0E8 428 aa10.41□□□□□ -0.74
SCUBE3-201ENST00000274938 FKBP5Q13451 457 aaPredicted RBP10.4□□□□□ -0.74
SCUBE3-201ENST00000274938 JMYQ8N9B5 988 aa10.4□□□□□ -0.74
SCUBE3-201ENST00000274938 DEF6Q9H4E7 631 aa10.4□□□□□ -0.74
SCUBE3-201ENST00000274938 TRAK1Q9UPV9 953 aa10.4□□□□□ -0.74
SCUBE3-201ENST00000274938 CBFA2T2O43439 604 aa10.4□□□□□ -0.74
SCUBE3-201ENST00000274938 AEBP1Q8IUX7 1158 aa10.4□□□□□ -0.74
SCUBE3-201ENST00000274938 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.4□□□□□ -0.74
SCUBE3-201ENST00000274938 PLCD4Q9BRC7 762 aa10.4□□□□□ -0.75
SCUBE3-201ENST00000274938 TXLNAP40222 546 aa10.39□□□□□ -0.75
SCUBE3-201ENST00000274938 VGFO15240 615 aaPredicted RBP10.39□□□□□ -0.75
SCUBE3-201ENST00000274938 BRPF3Q9ULD4 1205 aa10.39□□□□□ -0.75
SCUBE3-201ENST00000274938 SART3Q15020 963 aaKnown RBP10.39□□□□□ -0.75
SCUBE3-201ENST00000274938 PRPF40AO75400 957 aaKnown RBP10.39□□□□□ -0.75
SCUBE3-201ENST00000274938 ZFYVE27Q5T4F4 411 aa10.39□□□□□ -0.75
SCUBE3-201ENST00000274938 STAC3Q96MF2 364 aa10.39□□□□□ -0.75
SCUBE3-201ENST00000274938 RBM10P98175 930 aaKnown RBP10.39□□□□□ -0.75
SCUBE3-201ENST00000274938 WASHC2CQ9Y4E1 1318 aa10.38□□□□□ -0.75
SCUBE3-201ENST00000274938 VPS37DQ86XT2 251 aa10.38□□□□□ -0.75
SCUBE3-201ENST00000274938 EIF2S2P20042 333 aaKnown RBP10.38□□□□□ -0.75
SCUBE3-201ENST00000274938 CIZ1Q9ULV3 898 aaPredicted RBP10.38□□□□□ -0.75
SCUBE3-201ENST00000274938 TRHP20396 242 aaPredicted RBP10.38□□□□□ -0.75
SCUBE3-201ENST00000274938 PPFIBP1Q86W92 1011 aa10.38□□□□□ -0.75
SCUBE3-201ENST00000274938 GRPEL1Q9HAV7 217 aa10.38□□□□□ -0.75
SCUBE3-201ENST00000274938 UQCRHLA0A096LP55 91 aa10.38□□□□□ -0.75
SCUBE3-201ENST00000274938 UQCRHP07919 91 aa10.38□□□□□ -0.75
SCUBE3-201ENST00000274938 PDIA4P13667 645 aaKnown RBP10.37□□□□□ -0.75
SCUBE3-201ENST00000274938 TTLL5Q6EMB2 1281 aa10.37□□□□□ -0.75
SCUBE3-201ENST00000274938 KIF2AO00139 706 aaPredicted RBP10.37□□□□□ -0.75
SCUBE3-201ENST00000274938 RAD21O60216 631 aa10.37□□□□□ -0.75
SCUBE3-201ENST00000274938 EZRP15311 586 aaKnown RBP10.37□□□□□ -0.75
SCUBE3-201ENST00000274938 SYCP1Q15431 976 aa10.37□□□□□ -0.75
SCUBE3-201ENST00000274938 CCDC181Q5TID7 509 aa10.37□□□□□ -0.75
SCUBE3-201ENST00000274938 GCC1Q96CN9 775 aa10.37□□□□□ -0.75
SCUBE3-201ENST00000274938 WDR33Q9C0J8 1336 aaKnown RBP10.37□□□□□ -0.75
SCUBE3-201ENST00000274938 GNAI3P08754 354 aa10.37□□□□□ -0.75
SCUBE3-201ENST00000274938 STK38Q15208 465 aa10.37□□□□□ -0.75
SCUBE3-201ENST00000274938 GBP3Q9H0R5 595 aa10.37□□□□□ -0.75
SCUBE3-201ENST00000274938 BRD4O60885 1362 aaPredicted RBP10.37□□□□□ -0.75
SCUBE3-201ENST00000274938 FOSBP53539 338 aa10.36□□□□□ -0.75
SCUBE3-201ENST00000274938 UBTFL1P0CB47 393 aaPredicted RBP10.36□□□□□ -0.75
SCUBE3-201ENST00000274938 NEFHP12036 1026 aa10.36□□□□□ -0.75
SCUBE3-201ENST00000274938 ANKRD1Q15327 319 aa10.36□□□□□ -0.75
SCUBE3-201ENST00000274938 CNTLNQ9NXG0 1405 aa10.36□□□□□ -0.75
SCUBE3-201ENST00000274938 SERPINC1P01008 464 aa10.36□□□□□ -0.75
SCUBE3-201ENST00000274938 SEPT7Q16181 437 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms