RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 CPS1P31327 1500 aa16.73■□□□□ 0.27
PFDN1-201ENST00000261813 NWD1Q149M9 1564 aa16.72■□□□□ 0.27
PFDN1-201ENST00000261813 ZEB1P37275 1124 aaPredicted RBP16.72■□□□□ 0.27
PFDN1-201ENST00000261813 KDM2AQ9Y2K7 1162 aa16.72■□□□□ 0.27
PFDN1-201ENST00000261813 METP08581 1390 aa16.72■□□□□ 0.27
PFDN1-201ENST00000261813 HSPA1LP34931 641 aa16.71■□□□□ 0.27
PFDN1-201ENST00000261813 PTPRUQ92729 1446 aa16.71■□□□□ 0.27
PFDN1-201ENST00000261813 L3MBTL2Q969R5 705 aa16.71■□□□□ 0.27
PFDN1-201ENST00000261813 PIK3R4Q99570 1358 aa16.71■□□□□ 0.27
PFDN1-201ENST00000261813 KCNA6P17658 529 aa16.7■□□□□ 0.26
PFDN1-201ENST00000261813 CHD2O14647 1828 aaKnown RBP16.69■□□□□ 0.26
PFDN1-201ENST00000261813 PIP4P2Q8N4L2 257 aa16.69■□□□□ 0.26
PFDN1-201ENST00000261813 STAC3Q96MF2 364 aa16.69■□□□□ 0.26
PFDN1-201ENST00000261813 ASXL1Q8IXJ9 1541 aa16.68■□□□□ 0.26
PFDN1-201ENST00000261813 C14orf93Q9H972 538 aaKnown RBP16.67■□□□□ 0.26
PFDN1-201ENST00000261813 NKTRP30414 1462 aaKnown RBP16.66■□□□□ 0.26
PFDN1-201ENST00000261813 CFAP70Q5T0N1 1121 aa16.66■□□□□ 0.26
PFDN1-201ENST00000261813 XRN1Q8IZH2 1706 aaKnown RBP16.66■□□□□ 0.26
PFDN1-201ENST00000261813 LRRC7Q96NW7 1537 aa16.66■□□□□ 0.26
PFDN1-201ENST00000261813 TONSLQ96HA7 1378 aa16.66■□□□□ 0.26
PFDN1-201ENST00000261813 AMOTL2Q9Y2J4 779 aa16.65■□□□□ 0.26
PFDN1-201ENST00000261813 LAMC1P11047 1609 aa16.65■□□□□ 0.26
PFDN1-201ENST00000261813 PRAG1Q86YV5 1406 aa16.65■□□□□ 0.26
PFDN1-201ENST00000261813 TMEM132EQ6IEE7 984 aa16.64■□□□□ 0.25
PFDN1-201ENST00000261813 MED1Q15648 1581 aaPredicted RBP16.63■□□□□ 0.25
PFDN1-201ENST00000261813 ADGRB1O14514 1584 aa16.63■□□□□ 0.25
PFDN1-201ENST00000261813 PRR29P0C7W0 189 aa16.61■□□□□ 0.25
PFDN1-201ENST00000261813 PROSER2Q86WR7 435 aaPredicted RBP16.61■□□□□ 0.25
PFDN1-201ENST00000261813 RBM33Q96EV2 1170 aaKnown RBP16.61■□□□□ 0.25
PFDN1-201ENST00000261813 XIRP1Q702N8 1843 aaKnown RBP16.6■□□□□ 0.25
PFDN1-201ENST00000261813 TMEM94Q12767 1356 aa16.6■□□□□ 0.25
PFDN1-201ENST00000261813 YTHDC2Q9H6S0 1430 aaKnown RBP16.6■□□□□ 0.25
PFDN1-201ENST00000261813 LRPPRCP42704 1394 aaKnown RBP16.59■□□□□ 0.25
PFDN1-201ENST00000261813 PTCH1Q13635 1447 aa16.59■□□□□ 0.25
PFDN1-201ENST00000261813 KIAA1210Q9ULL0 1709 aa16.59■□□□□ 0.25
PFDN1-201ENST00000261813 NBPF8Q3BBV2 869 aa16.59■□□□□ 0.25
PFDN1-201ENST00000261813 ROBO2Q9HCK4 1378 aa16.59■□□□□ 0.25
PFDN1-201ENST00000261813 TECPR2O15040 1411 aa16.59■□□□□ 0.25
PFDN1-201ENST00000261813 STK26Q9P289 416 aa16.58■□□□□ 0.24
PFDN1-201ENST00000261813 KNDC1Q76NI1 1749 aa16.58■□□□□ 0.24
PFDN1-201ENST00000261813 ABCC11Q96J66 1382 aa16.58■□□□□ 0.24
PFDN1-201ENST00000261813 TRPM1Q7Z4N2 1603 aa16.57■□□□□ 0.24
PFDN1-201ENST00000261813 NBPF1Q3BBV0 1214 aa16.56■□□□□ 0.24
PFDN1-201ENST00000261813 TIMELESSQ9UNS1 1208 aa16.55■□□□□ 0.24
PFDN1-201ENST00000261813 NCOA3Q9Y6Q9 1424 aa16.55■□□□□ 0.24
PFDN1-201ENST00000261813 DLC1Q96QB1 1528 aa16.53■□□□□ 0.24
PFDN1-201ENST00000261813 PLEKHH1Q9ULM0 1364 aa16.53■□□□□ 0.24
PFDN1-201ENST00000261813 TRAK1Q9UPV9 953 aa16.52■□□□□ 0.24
PFDN1-201ENST00000261813 WAPLQ7Z5K2 1190 aa16.51■□□□□ 0.23
PFDN1-201ENST00000261813 NALCNQ8IZF0 1738 aa16.51■□□□□ 0.23
PFDN1-201ENST00000261813 FAM135BQ49AJ0 1406 aa16.51■□□□□ 0.23
PFDN1-201ENST00000261813 SIRT1Q96EB6 747 aa16.51■□□□□ 0.23
PFDN1-201ENST00000261813 RALGAPBQ86X10 1494 aa16.5■□□□□ 0.23
PFDN1-201ENST00000261813 ADGRL3Q9HAR2 1447 aa16.5■□□□□ 0.23
PFDN1-201ENST00000261813 MSH6P52701 1360 aa16.5■□□□□ 0.23
PFDN1-201ENST00000261813 C14orf37Q86TY3 774 aa16.5■□□□□ 0.23
PFDN1-201ENST00000261813 ROCK2O75116 1388 aaKnown RBP16.49■□□□□ 0.23
PFDN1-201ENST00000261813 GPRASP1Q5JY77 1395 aa16.49■□□□□ 0.23
PFDN1-201ENST00000261813 ARHGEF28Q8N1W1 1705 aaKnown RBP16.49■□□□□ 0.23
PFDN1-201ENST00000261813 PRKAR2AP13861 404 aaKnown RBP16.49■□□□□ 0.23
PFDN1-201ENST00000261813 PRAM1Q96QH2 718 aa16.49■□□□□ 0.23
PFDN1-201ENST00000261813 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.48■□□□□ 0.23
PFDN1-201ENST00000261813 C19orf44Q9H6X5 657 aa16.48■□□□□ 0.23
PFDN1-201ENST00000261813 DCCP43146 1447 aa16.46■□□□□ 0.23
PFDN1-201ENST00000261813 SAFB2Q14151 953 aaKnown RBP eCLIP16.45■□□□□ 0.22
PFDN1-201ENST00000261813 POGKQ9P215 609 aa16.44■□□□□ 0.22
PFDN1-201ENST00000261813 CDC42BPGQ6DT37 1551 aa16.43■□□□□ 0.22
PFDN1-201ENST00000261813 CADPS2Q86UW7 1296 aa16.43■□□□□ 0.22
PFDN1-201ENST00000261813 CARD11Q9BXL7 1154 aa16.43■□□□□ 0.22
PFDN1-201ENST00000261813 ATF3P18847 181 aa16.42■□□□□ 0.22
PFDN1-201ENST00000261813 MST1RQ04912 1400 aa16.41■□□□□ 0.22
PFDN1-201ENST00000261813 ADGRB2O60241 1585 aa16.41■□□□□ 0.22
PFDN1-201ENST00000261813 CHADLQ6NUI6 762 aa16.4■□□□□ 0.22
PFDN1-201ENST00000261813 CREBZFQ9NS37 354 aa16.4■□□□□ 0.22
PFDN1-201ENST00000261813 MINK1Q8N4C8 1332 aaPredicted RBP16.4■□□□□ 0.22
PFDN1-201ENST00000261813 SLAIN2Q9P270 581 aa16.39■□□□□ 0.21
PFDN1-201ENST00000261813 CENPJQ9HC77 1338 aaPredicted RBP16.39■□□□□ 0.21
PFDN1-201ENST00000261813 HIRIP3Q9BW71 556 aaPredicted RBP16.38■□□□□ 0.21
PFDN1-201ENST00000261813 EIF3AQ14152 1382 aaKnown RBP16.38■□□□□ 0.21
PFDN1-201ENST00000261813 C1orf167Q5SNV9 1468 aa16.38■□□□□ 0.21
PFDN1-201ENST00000261813 QRICH2Q9H0J4 1663 aa16.38■□□□□ 0.21
PFDN1-201ENST00000261813 FMN2Q9NZ56 1722 aa16.37■□□□□ 0.21
PFDN1-201ENST00000261813 ROBO1Q9Y6N7 1651 aa16.37■□□□□ 0.21
PFDN1-201ENST00000261813 NUTM2FA1L443 756 aa16.35■□□□□ 0.21
PFDN1-201ENST00000261813 RGS17Q9UGC6 210 aaPredicted RBP16.35■□□□□ 0.21
PFDN1-201ENST00000261813 WASLO00401 505 aaPredicted RBP16.34■□□□□ 0.21
PFDN1-201ENST00000261813 USP47Q96K76 1375 aa16.34■□□□□ 0.21
PFDN1-201ENST00000261813 BRINP3Q76B58 766 aa16.33■□□□□ 0.2
PFDN1-201ENST00000261813 USP32Q8NFA0 1604 aa16.33■□□□□ 0.2
PFDN1-201ENST00000261813 ORAI2Q96SN7 254 aa16.32■□□□□ 0.2
PFDN1-201ENST00000261813 FBXO3Q9UK99 471 aa16.32■□□□□ 0.2
PFDN1-201ENST00000261813 TULP4Q9NRJ4 1543 aa16.32■□□□□ 0.2
PFDN1-201ENST00000261813 SBNO2Q9Y2G9 1366 aa16.31■□□□□ 0.2
PFDN1-201ENST00000261813 PRR36Q9H6K5 1346 aa16.31■□□□□ 0.2
PFDN1-201ENST00000261813 ST20-MTHFSA0A0A6YYL1 179 aa16.31■□□□□ 0.2
PFDN1-201ENST00000261813 ANKARQ7Z5J8 1434 aa16.3■□□□□ 0.2
PFDN1-201ENST00000261813 CDK19Q9BWU1 502 aa16.3■□□□□ 0.2
PFDN1-201ENST00000261813 ATP7BP35670 1465 aa16.29■□□□□ 0.2
PFDN1-201ENST00000261813 RGPD8O14715 1765 aaPredicted RBP16.29■□□□□ 0.2
PFDN1-201ENST00000261813 ESCO1Q5FWF5 840 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms