RNA–Protein interactions for RNA: ENST00000254605.10

RRP8-201, Transcript of ribosomal RNA processing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP8, Length 6,560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8-201ENST00000254605 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.54□□□□□ -0.72
RRP8-201ENST00000254605 PHF14O94880 888 aa10.53□□□□□ -0.72
RRP8-201ENST00000254605 DDX58O95786 925 aaKnown RBP10.53□□□□□ -0.72
RRP8-201ENST00000254605 MATR3P43243 847 aaKnown RBP eCLIP10.53□□□□□ -0.72
RRP8-201ENST00000254605 SETQ01105 290 aaPredicted RBP10.53□□□□□ -0.72
RRP8-201ENST00000254605 FANCD2Q9BXW9 1451 aa10.53□□□□□ -0.72
RRP8-201ENST00000254605 CCDC85AQ96PX6 553 aaPredicted RBP10.53□□□□□ -0.72
RRP8-201ENST00000254605 PTPRGP23470 1445 aa10.53□□□□□ -0.72
RRP8-201ENST00000254605 CEBPZQ03701 1054 aaKnown RBP10.53□□□□□ -0.72
RRP8-201ENST00000254605 OFD1O75665 1012 aa10.52□□□□□ -0.73
RRP8-201ENST00000254605 MAP4K4O95819 1239 aaPredicted RBP10.52□□□□□ -0.73
RRP8-201ENST00000254605 CABP2Q9NPB3 220 aa10.52□□□□□ -0.73
RRP8-201ENST00000254605 EVC2Q86UK5 1308 aa10.52□□□□□ -0.73
RRP8-201ENST00000254605 ANKRD20A12PQ8NF67 263 aa10.52□□□□□ -0.73
RRP8-201ENST00000254605 KRT18P05783 430 aaKnown RBP10.51□□□□□ -0.73
RRP8-201ENST00000254605 ZKSCAN1P17029 563 aaPredicted RBP10.51□□□□□ -0.73
RRP8-201ENST00000254605 RALYLQ86SE5 291 aaKnown RBP10.51□□□□□ -0.73
RRP8-201ENST00000254605 KIF6Q6ZMV9 814 aa10.51□□□□□ -0.73
RRP8-201ENST00000254605 CRBNQ96SW2 442 aa10.51□□□□□ -0.73
RRP8-201ENST00000254605 ANKRD62A6NC57 917 aa10.51□□□□□ -0.73
RRP8-201ENST00000254605 ABTB2Q8N961 1025 aa10.51□□□□□ -0.73
RRP8-201ENST00000254605 MPHOSPH10O00566 681 aaKnown RBP10.51□□□□□ -0.73
RRP8-201ENST00000254605 MYL6BP14649 208 aa10.51□□□□□ -0.73
RRP8-201ENST00000254605 LRRFIP1Q32MZ4 808 aaKnown RBP10.51□□□□□ -0.73
RRP8-201ENST00000254605 SIL1Q9H173 461 aa10.51□□□□□ -0.73
RRP8-201ENST00000254605 CNNM1Q9NRU3 951 aa10.51□□□□□ -0.73
RRP8-201ENST00000254605 AK7Q96M32 723 aa10.5□□□□□ -0.73
RRP8-201ENST00000254605 TTC16Q8NEE8 873 aa10.5□□□□□ -0.73
RRP8-201ENST00000254605 GGNBP2Q9H3C7 697 aa10.5□□□□□ -0.73
RRP8-201ENST00000254605 CCDC144AA2RUR9 1427 aa10.5□□□□□ -0.73
RRP8-201ENST00000254605 NLRP6P59044 892 aa10.5□□□□□ -0.73
RRP8-201ENST00000254605 TTLL12Q14166 644 aaPredicted RBP10.5□□□□□ -0.73
RRP8-201ENST00000254605 TMEM132EQ6IEE7 984 aa10.5□□□□□ -0.73
RRP8-201ENST00000254605 APAF1O14727 1248 aa10.5□□□□□ -0.73
RRP8-201ENST00000254605 DIAPH1O60610 1272 aaKnown RBP10.5□□□□□ -0.73
RRP8-201ENST00000254605 CCDC18Q5T9S5 1454 aa10.49□□□□□ -0.73
RRP8-201ENST00000254605 CDK5RAP3Q96JB5 506 aa10.49□□□□□ -0.73
RRP8-201ENST00000254605 CA8P35219 290 aa10.49□□□□□ -0.73
RRP8-201ENST00000254605 PROSER2Q86WR7 435 aaPredicted RBP10.49□□□□□ -0.73
RRP8-201ENST00000254605 RUFY2Q8WXA3 655 aa10.49□□□□□ -0.73
RRP8-201ENST00000254605 CGNL1Q0VF96 1302 aa10.49□□□□□ -0.73
RRP8-201ENST00000254605 SAFBQ15424 915 aaKnown RBP eCLIP10.49□□□□□ -0.73
RRP8-201ENST00000254605 WDR78Q5VTH9 848 aa10.49□□□□□ -0.73
RRP8-201ENST00000254605 TOM1L2Q6ZVM7 507 aa10.49□□□□□ -0.73
RRP8-201ENST00000254605 ZNF771Q7L3S4 317 aaPredicted RBP10.49□□□□□ -0.73
RRP8-201ENST00000254605 VPS8Q8N3P4 1428 aa10.48□□□□□ -0.73
RRP8-201ENST00000254605 TRMT1LQ7Z2T5 733 aaKnown RBP10.48□□□□□ -0.73
RRP8-201ENST00000254605 CAGE1Q8TC20 777 aa10.48□□□□□ -0.73
RRP8-201ENST00000254605 CC2D2AQ9P2K1 1620 aa10.48□□□□□ -0.73
RRP8-201ENST00000254605 ZKSCAN2Q63HK3 967 aa10.48□□□□□ -0.73
RRP8-201ENST00000254605 FMNL2Q96PY5 1086 aa10.48□□□□□ -0.73
RRP8-201ENST00000254605 PLCD4Q9BRC7 762 aa10.48□□□□□ -0.73
RRP8-201ENST00000254605 EXOC6Q8TAG9 804 aa10.48□□□□□ -0.73
RRP8-201ENST00000254605 RUFY1Q96T51 708 aa10.48□□□□□ -0.73
RRP8-201ENST00000254605 LNPKQ9C0E8 428 aa10.47□□□□□ -0.73
RRP8-201ENST00000254605 STK3Q13188 491 aa10.47□□□□□ -0.73
RRP8-201ENST00000254605 RSPH4AQ5TD94 716 aa10.47□□□□□ -0.73
RRP8-201ENST00000254605 TTC39AQ5SRH9 613 aa10.47□□□□□ -0.73
RRP8-201ENST00000254605 C1orf115Q9H7X2 142 aa10.47□□□□□ -0.73
RRP8-201ENST00000254605 PDCL3Q9H2J4 239 aa10.47□□□□□ -0.73
RRP8-201ENST00000254605 SMC3Q9UQE7 1217 aa10.47□□□□□ -0.73
RRP8-201ENST00000254605 PSMD1Q99460 953 aa10.47□□□□□ -0.73
RRP8-201ENST00000254605 FSD1Q9BTV5 496 aa10.47□□□□□ -0.73
RRP8-201ENST00000254605 SEPT11Q9NVA2 429 aaKnown RBP10.47□□□□□ -0.73
RRP8-201ENST00000254605 BRMS1Q9HCU9 246 aa10.46□□□□□ -0.73
RRP8-201ENST00000254605 NEFHP12036 1026 aa10.46□□□□□ -0.73
RRP8-201ENST00000254605 CCER2I3L3R5 266 aa10.46□□□□□ -0.74
RRP8-201ENST00000254605 NLRP13Q86W25 1043 aa10.46□□□□□ -0.74
RRP8-201ENST00000254605 SASS6Q6UVJ0 657 aa10.46□□□□□ -0.74
RRP8-201ENST00000254605 HOOK1Q9UJC3 728 aaKnown RBP10.45□□□□□ -0.74
RRP8-201ENST00000254605 NUP133Q8WUM0 1156 aa10.45□□□□□ -0.74
RRP8-201ENST00000254605 ADAMTS2O95450 1211 aa10.45□□□□□ -0.74
RRP8-201ENST00000254605 USP5P45974 858 aa10.45□□□□□ -0.74
RRP8-201ENST00000254605 SYCP1Q15431 976 aa10.45□□□□□ -0.74
RRP8-201ENST00000254605 RAPGEF2Q9Y4G8 1499 aa10.44□□□□□ -0.74
RRP8-201ENST00000254605 SSBP05455 408 aaKnown RBP eCLIP10.44□□□□□ -0.74
RRP8-201ENST00000254605 RNF20Q5VTR2 975 aa10.44□□□□□ -0.74
RRP8-201ENST00000254605 SCLT1Q96NL6 688 aa10.44□□□□□ -0.74
RRP8-201ENST00000254605 SLC4A8Q2Y0W8 1093 aa10.44□□□□□ -0.74
RRP8-201ENST00000254605 TMEM87AQ8NBN3 555 aa10.44□□□□□ -0.74
RRP8-201ENST00000254605 IFT57Q9NWB7 429 aa10.44□□□□□ -0.74
RRP8-201ENST00000254605 NEBLO76041 1014 aa10.44□□□□□ -0.74
RRP8-201ENST00000254605 PDE3BQ13370 1112 aa10.44□□□□□ -0.74
RRP8-201ENST00000254605 PRDM2Q13029 1718 aa10.44□□□□□ -0.74
RRP8-201ENST00000254605 TXNDC2Q86VQ3 553 aa10.43□□□□□ -0.74
RRP8-201ENST00000254605 PODXL2Q9NZ53 605 aa10.43□□□□□ -0.74
RRP8-201ENST00000254605 TBC1D2BQ9UPU7 963 aa10.43□□□□□ -0.74
RRP8-201ENST00000254605 UBTFL1P0CB47 393 aaPredicted RBP10.43□□□□□ -0.74
RRP8-201ENST00000254605 TANGO6Q9C0B7 1094 aa10.43□□□□□ -0.74
RRP8-201ENST00000254605 CABP4P57796 275 aa10.43□□□□□ -0.74
RRP8-201ENST00000254605 ZNF644Q9H582 1327 aaPredicted RBP10.43□□□□□ -0.74
RRP8-201ENST00000254605 MPNDQ8N594 471 aa10.43□□□□□ -0.74
RRP8-201ENST00000254605 TIMELESSQ9UNS1 1208 aa10.43□□□□□ -0.74
RRP8-201ENST00000254605 ATP6V1DQ9Y5K8 247 aa10.43□□□□□ -0.74
RRP8-201ENST00000254605 LIG1P18858 919 aa10.42□□□□□ -0.74
RRP8-201ENST00000254605 E9PSI1 815 aa10.42□□□□□ -0.74
RRP8-201ENST00000254605 SSR1P43307 286 aaKnown RBP10.42□□□□□ -0.74
RRP8-201ENST00000254605 OLFM4Q6UX06 510 aa10.42□□□□□ -0.74
RRP8-201ENST00000254605 GPS2Q13227 327 aa10.42□□□□□ -0.74
RRP8-201ENST00000254605 RNF214Q8ND24 703 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms