RNA–Protein interactions for RNA: ENST00000244763.8

SSR1-201, Transcript of signal sequence receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR1, Length 9,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-201ENST00000244763 TNNT3P45378 269 aaPredicted RBP8.88□□□□□ -0.99
SSR1-201ENST00000244763 NLRP2Q9NX02 1062 aa8.88□□□□□ -0.99
SSR1-201ENST00000244763 GNAI3P08754 354 aa8.88□□□□□ -0.99
SSR1-201ENST00000244763 RRP1P56182 461 aaKnown RBP8.88□□□□□ -0.99
SSR1-201ENST00000244763 SETQ01105 290 aaPredicted RBP8.88□□□□□ -0.99
SSR1-201ENST00000244763 ERC1Q8IUD2 1116 aa8.88□□□□□ -0.99
SSR1-201ENST00000244763 CLASRPQ8N2M8 674 aaKnown RBP8.88□□□□□ -0.99
SSR1-201ENST00000244763 ABTB2Q8N961 1025 aa8.88□□□□□ -0.99
SSR1-201ENST00000244763 CDR1P51861 262 aa8.88□□□□□ -0.99
SSR1-201ENST00000244763 TXNDC2Q86VQ3 553 aa8.88□□□□□ -0.99
SSR1-201ENST00000244763 KIF21BO75037 1637 aa8.88□□□□□ -0.99
SSR1-201ENST00000244763 CCAR1Q8IX12 1150 aaKnown RBP8.88□□□□□ -0.99
SSR1-201ENST00000244763 SLC52A1Q9NWF4 448 aa8.88□□□□□ -0.99
SSR1-201ENST00000244763 SMC3Q9UQE7 1217 aa8.88□□□□□ -0.99
SSR1-201ENST00000244763 UBTFL1P0CB47 393 aaPredicted RBP8.88□□□□□ -0.99
SSR1-201ENST00000244763 TATP17735 454 aaPredicted RBP8.88□□□□□ -0.99
SSR1-201ENST00000244763 CNTROBQ8N137 903 aa8.87□□□□□ -0.99
SSR1-201ENST00000244763 GNL3LQ9NVN8 582 aaKnown RBP8.87□□□□□ -0.99
SSR1-201ENST00000244763 SASS6Q6UVJ0 657 aa8.87□□□□□ -0.99
SSR1-201ENST00000244763 CCDC27Q2M243 656 aa8.87□□□□□ -0.99
SSR1-201ENST00000244763 BCL2L13Q9BXK5 485 aa8.87□□□□□ -0.99
SSR1-201ENST00000244763 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.87□□□□□ -0.99
SSR1-201ENST00000244763 RTN4Q9NQC3 1192 aaKnown RBP8.87□□□□□ -0.99
SSR1-201ENST00000244763 PDE4CQ08493 712 aa8.86□□□□□ -0.99
SSR1-201ENST00000244763 ANKRD50Q9ULJ7 1429 aa8.86□□□□□ -0.99
SSR1-201ENST00000244763 EPS15P42566 896 aa8.86□□□□□ -0.99
SSR1-201ENST00000244763 PROSER2Q86WR7 435 aaPredicted RBP8.86□□□□□ -0.99
SSR1-201ENST00000244763 MCM2P49736 904 aa8.86□□□□□ -0.99
SSR1-201ENST00000244763 CCDC173Q0VFZ6 552 aa8.86□□□□□ -0.99
SSR1-201ENST00000244763 NAT10Q9H0A0 1025 aaKnown RBP8.86□□□□□ -0.99
SSR1-201ENST00000244763 WASHC4Q2M389 1173 aa8.86□□□□□ -0.99
SSR1-201ENST00000244763 CT47A1Q5JQC4 288 aaPredicted RBP8.86□□□□□ -0.99
SSR1-201ENST00000244763 BICD2Q8TD16 824 aa8.86□□□□□ -0.99
SSR1-201ENST00000244763 NEUROD6Q96NK8 337 aa8.86□□□□□ -0.99
SSR1-201ENST00000244763 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.86□□□□□ -0.99
SSR1-201ENST00000244763 COG6Q9Y2V7 657 aa8.85□□□□□ -0.99
SSR1-201ENST00000244763 HFM1A2PYH4 1435 aa8.85□□□□□ -0.99
SSR1-201ENST00000244763 IKQ13123 557 aaPredicted RBP8.85□□□□□ -0.99
SSR1-201ENST00000244763 ESCO1Q5FWF5 840 aa8.85□□□□□ -0.99
SSR1-201ENST00000244763 CCDC73Q6ZRK6 1079 aa8.85□□□□□ -0.99
SSR1-201ENST00000244763 KLHL34Q8N239 644 aa8.85□□□□□ -0.99
SSR1-201ENST00000244763 TXLNAP40222 546 aa8.85□□□□□ -0.99
SSR1-201ENST00000244763 OLFM4Q6UX06 510 aa8.84□□□□□ -0.99
SSR1-201ENST00000244763 FOXD4L1Q9NU39 408 aa8.84□□□□□ -0.99
SSR1-201ENST00000244763 ANKLE2Q86XL3 938 aa8.84□□□□□ -0.99
SSR1-201ENST00000244763 MYO6Q9UM54 1294 aa8.84□□□□□ -0.99
SSR1-201ENST00000244763 CHMP5Q9NZZ3 219 aa8.84□□□□□ -0.99
SSR1-201ENST00000244763 SPG7Q9UQ90 795 aa8.84□□□□□ -0.99
SSR1-201ENST00000244763 IGF1RP08069 1367 aa8.84□□□□□ -0.99
SSR1-201ENST00000244763 NECTIN2Q92692 538 aa8.84□□□□□ -0.99
SSR1-201ENST00000244763 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.84□□□□□ -0.99
SSR1-201ENST00000244763 FGD6Q6ZV73 1430 aa8.84□□□□□ -0.99
SSR1-201ENST00000244763 ZSCAN25Q6NSZ9 544 aa8.84□□□□□ -0.99
SSR1-201ENST00000244763 PDCP20941 246 aa8.84□□□□□ -0.99
SSR1-201ENST00000244763 CCDC158Q5M9N0 1113 aa8.84□□□□□ -0.99
SSR1-201ENST00000244763 CRBNQ96SW2 442 aa8.83□□□□□ -1
SSR1-201ENST00000244763 CCDC7Q96M83 1385 aa8.83□□□□□ -1
SSR1-201ENST00000244763 AIMP1Q12904 312 aaKnown RBP8.83□□□□□ -1
SSR1-201ENST00000244763 NCAPD3P42695 1498 aa8.83□□□□□ -1
SSR1-201ENST00000244763 ACBD3Q9H3P7 528 aa8.83□□□□□ -1
SSR1-201ENST00000244763 OFD1O75665 1012 aa8.82□□□□□ -1
SSR1-201ENST00000244763 LETM1O95202 739 aaPredicted RBP8.82□□□□□ -1
SSR1-201ENST00000244763 DHX8Q14562 1220 aaKnown RBP8.82□□□□□ -1
SSR1-201ENST00000244763 PDE4AP27815 886 aa8.82□□□□□ -1
SSR1-201ENST00000244763 CCAR2Q8N163 923 aaKnown RBP8.82□□□□□ -1
SSR1-201ENST00000244763 PIP4K2AP48426 406 aaPredicted RBP8.82□□□□□ -1
SSR1-201ENST00000244763 HMOX1P09601 288 aa8.82□□□□□ -1
SSR1-201ENST00000244763 FOXD4L5Q5VV16 416 aaPredicted RBP8.82□□□□□ -1
SSR1-201ENST00000244763 FOXD4L4Q8WXT5 416 aaPredicted RBP8.82□□□□□ -1
SSR1-201ENST00000244763 RPGRIP1LQ68CZ1 1315 aa8.82□□□□□ -1
SSR1-201ENST00000244763 CASKIN1Q8WXD9 1431 aa8.82□□□□□ -1
SSR1-201ENST00000244763 KIF7Q2M1P5 1343 aa8.81□□□□□ -1
SSR1-201ENST00000244763 CNNM1Q9NRU3 951 aa8.81□□□□□ -1
SSR1-201ENST00000244763 CT47B1P0C2W7 299 aaPredicted RBP8.81□□□□□ -1
SSR1-201ENST00000244763 HOMER1Q86YM7 354 aa8.81□□□□□ -1
SSR1-201ENST00000244763 CABP4P57796 275 aa8.81□□□□□ -1
SSR1-201ENST00000244763 CNTLNQ9NXG0 1405 aa8.81□□□□□ -1
SSR1-201ENST00000244763 PDIA4P13667 645 aaKnown RBP8.81□□□□□ -1
SSR1-201ENST00000244763 RUFY1Q96T51 708 aa8.81□□□□□ -1
SSR1-201ENST00000244763 IFT140Q96RY7 1462 aa8.81□□□□□ -1
SSR1-201ENST00000244763 NACAP1Q9BZK3 213 aa8.81□□□□□ -1
SSR1-201ENST00000244763 BRD4O60885 1362 aaPredicted RBP8.81□□□□□ -1
SSR1-201ENST00000244763 EFCAB5A4FU69 1503 aa8.8□□□□□ -1
SSR1-201ENST00000244763 ANKRD1Q15327 319 aa8.8□□□□□ -1
SSR1-201ENST00000244763 TEX35Q5T0J7 233 aa8.8□□□□□ -1
SSR1-201ENST00000244763 CDK5RAP3Q96JB5 506 aa8.8□□□□□ -1
SSR1-201ENST00000244763 AK7Q96M32 723 aa8.8□□□□□ -1
SSR1-201ENST00000244763 GNAI2P04899 355 aa8.8□□□□□ -1
SSR1-201ENST00000244763 GGNBP2Q9H3C7 697 aa8.8□□□□□ -1
SSR1-201ENST00000244763 PLIN1O60240 522 aa8.8□□□□□ -1
SSR1-201ENST00000244763 FILIP1LQ4L180 1135 aa8.8□□□□□ -1
SSR1-201ENST00000244763 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.8□□□□□ -12e-6■■□□□ 12.4
SSR1-201ENST00000244763 LRRC9Q6ZRR7 1453 aa8.8□□□□□ -1
SSR1-201ENST00000244763 CCT4P50991 539 aaKnown RBP8.8□□□□□ -1
SSR1-201ENST00000244763 TOM1L2Q6ZVM7 507 aa8.8□□□□□ -1
SSR1-201ENST00000244763 WDHD1O75717 1129 aaPredicted RBP8.8□□□□□ -1
SSR1-201ENST00000244763 MTHFSP49914 203 aa8.8□□□□□ -1
SSR1-201ENST00000244763 GCC1Q96CN9 775 aa8.8□□□□□ -1
SSR1-201ENST00000244763 RBM42Q9BTD8 480 aaKnown RBP8.8□□□□□ -1
SSR1-201ENST00000244763 VPS37CA5D8V6 355 aaPredicted RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms