RNA–Protein interactions for RNA: ENST00000057513.7

TNIP3-201, Transcript of TNFAIP3 interacting protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNIP3, Length 2,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP3-201ENST00000057513 CARD14Q9BXL6 1004 aa17.26■□□□□ 0.35
TNIP3-201ENST00000057513 NCOA3Q9Y6Q9 1424 aa17.26■□□□□ 0.35
TNIP3-201ENST00000057513 SYCP2Q9BX26 1530 aa17.26■□□□□ 0.35
TNIP3-201ENST00000057513 MVPQ14764 893 aaKnown RBP17.25■□□□□ 0.35
TNIP3-201ENST00000057513 SCAPERQ9BY12 1400 aa17.25■□□□□ 0.35
TNIP3-201ENST00000057513 KDM5AP29375 1690 aaKnown RBP17.25■□□□□ 0.35
TNIP3-201ENST00000057513 CHMP7Q8WUX9 453 aaPredicted RBP17.25■□□□□ 0.35
TNIP3-201ENST00000057513 POLR3AO14802 1390 aaPredicted RBP17.24■□□□□ 0.35
TNIP3-201ENST00000057513 TCP11L2Q8N4U5 519 aa17.24■□□□□ 0.35
TNIP3-201ENST00000057513 PDCL3Q9H2J4 239 aa17.24■□□□□ 0.35
TNIP3-201ENST00000057513 PREX2Q70Z35 1606 aa17.24■□□□□ 0.35
TNIP3-201ENST00000057513 CEP152O94986 1710 aa17.23■□□□□ 0.35
TNIP3-201ENST00000057513 MAST1Q9Y2H9 1570 aa17.23■□□□□ 0.35
TNIP3-201ENST00000057513 KIAA1211Q6ZU35 1233 aa17.22■□□□□ 0.35
TNIP3-201ENST00000057513 RUNDC1Q96C34 613 aa17.22■□□□□ 0.35
TNIP3-201ENST00000057513 PHF23Q9BUL5 403 aaPredicted RBP17.22■□□□□ 0.35
TNIP3-201ENST00000057513 WDR63Q8IWG1 891 aa17.21■□□□□ 0.35
TNIP3-201ENST00000057513 FBLN2P98095 1184 aa17.21■□□□□ 0.35
TNIP3-201ENST00000057513 GBP4Q96PP9 640 aa17.21■□□□□ 0.35
TNIP3-201ENST00000057513 SMC5Q8IY18 1101 aa17.2■□□□□ 0.34
TNIP3-201ENST00000057513 FTSJ3Q8IY81 847 aaKnown RBP17.2■□□□□ 0.34
TNIP3-201ENST00000057513 SKOR2Q2VWA4 1001 aaPredicted RBP17.2■□□□□ 0.34
TNIP3-201ENST00000057513 SNX21Q969T3 373 aa17.2■□□□□ 0.34
TNIP3-201ENST00000057513 SHPRHQ149N8 1683 aa17.2■□□□□ 0.34
TNIP3-201ENST00000057513 IQSEC2Q5JU85 1478 aa17.19■□□□□ 0.34
TNIP3-201ENST00000057513 RAB3GAP1Q15042 981 aa17.19■□□□□ 0.34
TNIP3-201ENST00000057513 ZKSCAN2Q63HK3 967 aa17.19■□□□□ 0.34
TNIP3-201ENST00000057513 DZIP1LQ8IYY4 767 aaKnown RBP17.19■□□□□ 0.34
TNIP3-201ENST00000057513 SPHKAPQ2M3C7 1700 aa17.19■□□□□ 0.34
TNIP3-201ENST00000057513 RBM25P49756 843 aaKnown RBP17.19■□□□□ 0.34
TNIP3-201ENST00000057513 CIZ1Q9ULV3 898 aaPredicted RBP17.19■□□□□ 0.34
TNIP3-201ENST00000057513 TTC37Q6PGP7 1564 aa17.19■□□□□ 0.34
TNIP3-201ENST00000057513 TNNT2P45379 298 aaPredicted RBP17.18■□□□□ 0.34
TNIP3-201ENST00000057513 ERVK-7P63135 1459 aa17.18■□□□□ 0.34
TNIP3-201ENST00000057513 DUOX2Q9NRD8 1548 aa17.18■□□□□ 0.34
TNIP3-201ENST00000057513 HSP90AB1P08238 724 aaKnown RBP17.18■□□□□ 0.34
TNIP3-201ENST00000057513 CCDC173Q0VFZ6 552 aa17.18■□□□□ 0.34
TNIP3-201ENST00000057513 HDAC1Q13547 482 aaPredicted RBP17.17■□□□□ 0.34
TNIP3-201ENST00000057513 ZSCAN30Q86W11 494 aa17.16■□□□□ 0.34
TNIP3-201ENST00000057513 PPP1R9BQ96SB3 815 aa17.16■□□□□ 0.34
TNIP3-201ENST00000057513 ARHGAP5Q13017 1502 aa17.16■□□□□ 0.34
TNIP3-201ENST00000057513 NASPP49321 788 aaPredicted RBP17.16■□□□□ 0.34
TNIP3-201ENST00000057513 FOXD4L1Q9NU39 408 aa17.15■□□□□ 0.34
TNIP3-201ENST00000057513 KANK1Q14678 1352 aa17.15■□□□□ 0.34
TNIP3-201ENST00000057513 OFD1O75665 1012 aa17.15■□□□□ 0.34
TNIP3-201ENST00000057513 MORC1Q86VD1 984 aa17.15■□□□□ 0.34
TNIP3-201ENST00000057513 SHROOM2Q13796 1616 aa17.14■□□□□ 0.33
TNIP3-201ENST00000057513 PTMSP20962 102 aa17.14■□□□□ 0.33
TNIP3-201ENST00000057513 CCDC27Q2M243 656 aa17.14■□□□□ 0.33
TNIP3-201ENST00000057513 ITPRIPQ8IWB1 547 aa17.13■□□□□ 0.33
TNIP3-201ENST00000057513 STAC3Q96MF2 364 aa17.13■□□□□ 0.33
TNIP3-201ENST00000057513 CD2BP2O95400 341 aaKnown RBP17.12■□□□□ 0.33
TNIP3-201ENST00000057513 TRIM27P14373 513 aa17.12■□□□□ 0.33
TNIP3-201ENST00000057513 RIPK4P57078 832 aa17.12■□□□□ 0.33
TNIP3-201ENST00000057513 RBM10P98175 930 aaKnown RBP17.12■□□□□ 0.33
TNIP3-201ENST00000057513 MSNP26038 577 aaKnown RBP17.11■□□□□ 0.33
TNIP3-201ENST00000057513 KIF2CQ99661 725 aa17.11■□□□□ 0.33
TNIP3-201ENST00000057513 SMC4Q9NTJ3 1288 aa17.11■□□□□ 0.33
TNIP3-201ENST00000057513 CFAP70Q5T0N1 1121 aa17.11■□□□□ 0.33
TNIP3-201ENST00000057513 ANP32BQ92688 251 aaKnown RBP17.11■□□□□ 0.33
TNIP3-201ENST00000057513 TSR2Q969E8 191 aaKnown RBP17.11■□□□□ 0.33
TNIP3-201ENST00000057513 DDX19BQ9UMR2 479 aa17.11■□□□□ 0.33
TNIP3-201ENST00000057513 TRPM2O94759 1503 aa17.1■□□□□ 0.33
TNIP3-201ENST00000057513 SSFA2P28290 1259 aa17.1■□□□□ 0.33
TNIP3-201ENST00000057513 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.1■□□□□ 0.33
TNIP3-201ENST00000057513 SLC24A1O60721 1099 aa17.1■□□□□ 0.33
TNIP3-201ENST00000057513 CALD1Q05682 793 aaKnown RBP17.1■□□□□ 0.33
TNIP3-201ENST00000057513 NSD3Q9BZ95 1437 aa17.1■□□□□ 0.33
TNIP3-201ENST00000057513 CLTCL1P53675 1640 aa17.09■□□□□ 0.33
TNIP3-201ENST00000057513 LNPKQ9C0E8 428 aa17.09■□□□□ 0.33
TNIP3-201ENST00000057513 MTHFSP49914 203 aa17.08■□□□□ 0.33
TNIP3-201ENST00000057513 DDX49Q9Y6V7 483 aaKnown RBP17.08■□□□□ 0.33
TNIP3-201ENST00000057513 K7ELQ4 463 aaPredicted RBP17.08■□□□□ 0.32
TNIP3-201ENST00000057513 NUCB1Q02818 461 aa17.08■□□□□ 0.32
TNIP3-201ENST00000057513 KIAA1210Q9ULL0 1709 aa17.08■□□□□ 0.32
TNIP3-201ENST00000057513 GOLGA6L22H0YM25 854 aa17.07■□□□□ 0.32
TNIP3-201ENST00000057513 TERF1P54274 439 aa17.07■□□□□ 0.32
TNIP3-201ENST00000057513 KLHL40Q2TBA0 621 aa17.07■□□□□ 0.32
TNIP3-201ENST00000057513 ATF7IPQ6VMQ6 1270 aa17.07■□□□□ 0.32
TNIP3-201ENST00000057513 SSH1Q8WYL5 1049 aa17.07■□□□□ 0.32
TNIP3-201ENST00000057513 ERCC6Q03468 1493 aa17.07■□□□□ 0.32
TNIP3-201ENST00000057513 IBTKQ9P2D0 1353 aaPredicted RBP17.07■□□□□ 0.32
TNIP3-201ENST00000057513 EXOSC9Q06265 439 aaKnown RBP17.07■□□□□ 0.32
TNIP3-201ENST00000057513 RBM42Q9BTD8 480 aaKnown RBP17.07■□□□□ 0.32
TNIP3-201ENST00000057513 TMEM57Q8N5G2 664 aa17.06■□□□□ 0.32
TNIP3-201ENST00000057513 ZBTB40Q9NUA8 1239 aa17.06■□□□□ 0.32
TNIP3-201ENST00000057513 FAM13BQ9NYF5 915 aa17.06■□□□□ 0.32
TNIP3-201ENST00000057513 R3HCC1Q9Y3T6 440 aaKnown RBP17.06■□□□□ 0.32
TNIP3-201ENST00000057513 ZNF518AQ6AHZ1 1483 aa17.06■□□□□ 0.32
TNIP3-201ENST00000057513 CT47B1P0C2W7 299 aaPredicted RBP17.06■□□□□ 0.32
TNIP3-201ENST00000057513 GAS2L2Q8NHY3 880 aa17.06■□□□□ 0.32
TNIP3-201ENST00000057513 NOB1Q9ULX3 412 aaKnown RBP17.06■□□□□ 0.32
TNIP3-201ENST00000057513 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.06■□□□□ 0.32
TNIP3-201ENST00000057513 PTPRTO14522 1441 aa17.05■□□□□ 0.32
TNIP3-201ENST00000057513 BAG4O95429 457 aaKnown RBP17.05■□□□□ 0.32
TNIP3-201ENST00000057513 PRDM4Q9UKN5 801 aa17.05■□□□□ 0.32
TNIP3-201ENST00000057513 CLEC17AQ6ZS10 378 aa17.05■□□□□ 0.32
TNIP3-201ENST00000057513 U2AF1L5P0DN76 240 aaPredicted RBP17.04■□□□□ 0.32
TNIP3-201ENST00000057513 U2AF1Q01081 240 aaKnown RBP eCLIP17.04■□□□□ 0.32
TNIP3-201ENST00000057513 CHD1LQ86WJ1 897 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms