RNA–Protein interactions for RNA: ENSMUST00000210061.1

Clcn4-203, Transcript of H(+)/Cl(-) exchange transporter 4, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Clcn4, Length 2,445 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4-203ENSMUST00000210061 Rims1Q99NE5 1463 aa17.42■□□□□ 0.38
Clcn4-203ENSMUST00000210061 Talpid3E9PV87 1520 aa17.41■□□□□ 0.38
Clcn4-203ENSMUST00000210061 Prdm10Q3UTQ7 1184 aa17.4■□□□□ 0.38
Clcn4-203ENSMUST00000210061 Fam135bQ9DAI6 1403 aa17.39■□□□□ 0.37
Clcn4-203ENSMUST00000210061 Htatsf1Q8BGC0 757 aa17.39■□□□□ 0.37
Clcn4-203ENSMUST00000210061 Atxn3Q9CVD2 355 aa17.39■□□□□ 0.37
Clcn4-203ENSMUST00000210061 Iqgap3F8VQ29 1632 aa17.38■□□□□ 0.37
Clcn4-203ENSMUST00000210061 Cnga1P29974 684 aa17.38■□□□□ 0.37
Clcn4-203ENSMUST00000210061 KdrP35918 1367 aa17.38■□□□□ 0.37
Clcn4-203ENSMUST00000210061 Tmem131lQ3U3D7 1597 aa17.38■□□□□ 0.37
Clcn4-203ENSMUST00000210061 Nos1Q9Z0J4 1429 aa17.38■□□□□ 0.37
Clcn4-203ENSMUST00000210061 Ipo4Q8VI75 1082 aa17.38■□□□□ 0.37
Clcn4-203ENSMUST00000210061 GsdmaQ9EST1 446 aa17.38■□□□□ 0.37
Clcn4-203ENSMUST00000210061 IbtkQ6ZPR6 1352 aaKnown RBP17.38■□□□□ 0.37
Clcn4-203ENSMUST00000210061 AatkQ80YE4 1365 aa17.37■□□□□ 0.37
Clcn4-203ENSMUST00000210061 Iqsec2Q5DU25 1478 aa17.37■□□□□ 0.37
Clcn4-203ENSMUST00000210061 Cdk5rap2Q8K389 1822 aa17.37■□□□□ 0.37
Clcn4-203ENSMUST00000210061 Ppp2r3aB2RXC8 1150 aa17.37■□□□□ 0.37
Clcn4-203ENSMUST00000210061 Amer1Q7TS75 1132 aa17.36■□□□□ 0.37
Clcn4-203ENSMUST00000210061 Fndc1E9Q043 1732 aa17.36■□□□□ 0.37
Clcn4-203ENSMUST00000210061 Abca8aQ8K442 1620 aa17.36■□□□□ 0.37
Clcn4-203ENSMUST00000210061 Zfyve16Q80U44 1528 aa17.36■□□□□ 0.37
Clcn4-203ENSMUST00000210061 DnmbpQ6TXD4 1580 aa17.36■□□□□ 0.37
Clcn4-203ENSMUST00000210061 Fgd1P52734 960 aa17.36■□□□□ 0.37
Clcn4-203ENSMUST00000210061 Gm6268A2A3U9 297 aa17.35■□□□□ 0.37
Clcn4-203ENSMUST00000210061 Puf60Q3UEB3 564 aaKnown RBP17.35■□□□□ 0.37
Clcn4-203ENSMUST00000210061 KarsQ99MN1 595 aaKnown RBP17.35■□□□□ 0.37
Clcn4-203ENSMUST00000210061 P2rx7Q9Z1M0 595 aa17.35■□□□□ 0.37
Clcn4-203ENSMUST00000210061 Abca6Q8K441 1624 aa17.35■□□□□ 0.37
Clcn4-203ENSMUST00000210061 Znf608Q56A10 1511 aa17.35■□□□□ 0.37
Clcn4-203ENSMUST00000210061 Sptbn5F6UCX4 1208 aa17.34■□□□□ 0.37
Clcn4-203ENSMUST00000210061 Armcx1Q9CX83 456 aa17.34■□□□□ 0.37
Clcn4-203ENSMUST00000210061 Chd1P40201 1711 aa17.34■□□□□ 0.37
Clcn4-203ENSMUST00000210061 Scaf11E9PZM7 1456 aaKnown RBP17.33■□□□□ 0.37
Clcn4-203ENSMUST00000210061 ArxO35085 564 aa17.32■□□□□ 0.36
Clcn4-203ENSMUST00000210061 Polr3glQ8R0C0 218 aa17.32■□□□□ 0.36
Clcn4-203ENSMUST00000210061 Uggt1Q6P5E4 1551 aa17.32■□□□□ 0.36
Clcn4-203ENSMUST00000210061 Cald1E9QA15 768 aaKnown RBP17.31■□□□□ 0.36
Clcn4-203ENSMUST00000210061 Znf518aB2RRF6 1478 aaKnown RBP17.31■□□□□ 0.36
Clcn4-203ENSMUST00000210061 Efcab6Q6P1E8 1516 aa17.31■□□□□ 0.36
Clcn4-203ENSMUST00000210061 Adgrb3Q80ZF8 1522 aa17.31■□□□□ 0.36
Clcn4-203ENSMUST00000210061 Ksr2Q3UVC0 959 aa17.3■□□□□ 0.36
Clcn4-203ENSMUST00000210061 Tbc1d32Q3URV1 1296 aa17.3■□□□□ 0.36
Clcn4-203ENSMUST00000210061 Igf1rQ60751 1373 aa17.3■□□□□ 0.36
Clcn4-203ENSMUST00000210061 Hfm1D3Z4R1 1434 aa17.29■□□□□ 0.36
Clcn4-203ENSMUST00000210061 Rabep1O35551 862 aa17.29■□□□□ 0.36
Clcn4-203ENSMUST00000210061 Atl3Q91YH5 541 aa17.29■□□□□ 0.36
Clcn4-203ENSMUST00000210061 Tnpo1Q8BFY9 898 aaKnown RBP17.29■□□□□ 0.36
Clcn4-203ENSMUST00000210061 Trpm1Q2TV84 1622 aa17.29■□□□□ 0.36
Clcn4-203ENSMUST00000210061 Apaf1O88879 1249 aa17.28■□□□□ 0.36
Clcn4-203ENSMUST00000210061 Lemd3Q9WU40 921 aa17.28■□□□□ 0.36
Clcn4-203ENSMUST00000210061 Sipa1l1Q8C0T5 1782 aa17.27■□□□□ 0.36
Clcn4-203ENSMUST00000210061 Stag3O70576 1240 aa17.27■□□□□ 0.36
Clcn4-203ENSMUST00000210061 Ccar1Q8CH18 1146 aaKnown RBP17.27■□□□□ 0.36
Clcn4-203ENSMUST00000210061 Trim26Q99PN3 545 aa17.27■□□□□ 0.36
Clcn4-203ENSMUST00000210061 InsrP15208 1372 aa17.27■□□□□ 0.35
Clcn4-203ENSMUST00000210061 Ncbp3Q8BZR9 615 aaKnown RBP17.26■□□□□ 0.35
Clcn4-203ENSMUST00000210061 Ehbp1l1Q99MS7 1716 aa17.25■□□□□ 0.35
Clcn4-203ENSMUST00000210061 U2af1Q9D883 239 aaKnown RBP17.25■□□□□ 0.35
Clcn4-203ENSMUST00000210061 Adgrl1Q80TR1 1466 aa17.25■□□□□ 0.35
Clcn4-203ENSMUST00000210061 Adgrl3Q80TS3 1537 aa17.24■□□□□ 0.35
Clcn4-203ENSMUST00000210061 Skint5A7XUY5 1461 aa17.24■□□□□ 0.35
Clcn4-203ENSMUST00000210061 Tsen2Q6P7W5 460 aa17.24■□□□□ 0.35
Clcn4-203ENSMUST00000210061 Abca9Q8K449 1623 aa17.24■□□□□ 0.35
Clcn4-203ENSMUST00000210061 MaddQ80U28 1577 aa17.24■□□□□ 0.35
Clcn4-203ENSMUST00000210061 Prex1Q69ZK0 1650 aa17.24■□□□□ 0.35
Clcn4-203ENSMUST00000210061 Phlpp2Q8BXA7 1320 aa17.24■□□□□ 0.35
Clcn4-203ENSMUST00000210061 PalldQ9ET54 1408 aa17.24■□□□□ 0.35
Clcn4-203ENSMUST00000210061 Pnmal2G3X9N3 661 aa17.23■□□□□ 0.35
Clcn4-203ENSMUST00000210061 Antxr1Q9CZ52 562 aa17.23■□□□□ 0.35
Clcn4-203ENSMUST00000210061 Eif2ak4Q9QZ05 1648 aa17.22■□□□□ 0.35
Clcn4-203ENSMUST00000210061 Cluap1Q8R3P7 413 aa17.21■□□□□ 0.35
Clcn4-203ENSMUST00000210061 Ppp1r3fQ9JIG4 799 aa17.21■□□□□ 0.35
Clcn4-203ENSMUST00000210061 Topbp1Q6ZQF0 1515 aa17.21■□□□□ 0.34
Clcn4-203ENSMUST00000210061 Dusp27Q148W8 1138 aa17.2■□□□□ 0.34
Clcn4-203ENSMUST00000210061 4933402E13RikQ9D4D2 429 aa17.2■□□□□ 0.34
Clcn4-203ENSMUST00000210061 Ttc37F8VPK0 1563 aa17.2■□□□□ 0.34
Clcn4-203ENSMUST00000210061 Ino80Q6ZPV2 1559 aa17.2■□□□□ 0.34
Clcn4-203ENSMUST00000210061 AU022751B1B0V2 589 aa17.19■□□□□ 0.34
Clcn4-203ENSMUST00000210061 Hs1bp3Q3TC93 395 aa17.19■□□□□ 0.34
Clcn4-203ENSMUST00000210061 IqubQ8CDK3 788 aa17.19■□□□□ 0.34
Clcn4-203ENSMUST00000210061 CenpjQ569L8 1344 aa17.19■□□□□ 0.34
Clcn4-203ENSMUST00000210061 Plxnc1Q9QZC2 1574 aa17.19■□□□□ 0.34
Clcn4-203ENSMUST00000210061 Lrrc7Q80TE7 1490 aa17.19■□□□□ 0.34
Clcn4-203ENSMUST00000210061 AU015836B2RUM3 263 aa17.19■□□□□ 0.34
Clcn4-203ENSMUST00000210061 Hecw2Q6I6G8 1578 aa17.19■□□□□ 0.34
Clcn4-203ENSMUST00000210061 Med14A2ABV5 1459 aaKnown RBP17.18■□□□□ 0.34
Clcn4-203ENSMUST00000210061 Mfap1aC0HKD8 439 aaKnown RBP17.18■□□□□ 0.34
Clcn4-203ENSMUST00000210061 Mfap1bC0HKD9 439 aaKnown RBP17.18■□□□□ 0.34
Clcn4-203ENSMUST00000210061 Depdc5P61460 1591 aa17.18■□□□□ 0.34
Clcn4-203ENSMUST00000210061 Tecpr2Q3UH45 1423 aa17.18■□□□□ 0.34
Clcn4-203ENSMUST00000210061 Pdcl3Q8BVF2 240 aa17.17■□□□□ 0.34
Clcn4-203ENSMUST00000210061 Map7O88735 730 aa17.17■□□□□ 0.34
Clcn4-203ENSMUST00000210061 Kcnn1Q9EQR3 537 aa17.17■□□□□ 0.34
Clcn4-203ENSMUST00000210061 AU019823E9PUQ3 292 aa17.15■□□□□ 0.34
Clcn4-203ENSMUST00000210061 Spryd3E9Q9B3 442 aa17.15■□□□□ 0.34
Clcn4-203ENSMUST00000210061 Catsper2A2ARP9 588 aa17.15■□□□□ 0.34
Clcn4-203ENSMUST00000210061 Dnttip2Q8R2M2 758 aaKnown RBP17.15■□□□□ 0.34
Clcn4-203ENSMUST00000210061 Slc52a2Q9D8F3 450 aa17.15■□□□□ 0.34
Clcn4-203ENSMUST00000210061 CastP51125 788 aa17.14■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 39.6 ms