RNA–Protein interactions for RNA: ENSMUST00000202681.3

Pdgfra-208, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 2,876 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-208ENSMUST00000202681 Erbb4Q61527 1308 aa11□□□□□ -0.65
Pdgfra-208ENSMUST00000202681 AI481877A2ALV5 1481 aa10.99□□□□□ -0.65
Pdgfra-208ENSMUST00000202681 Catsper2A2ARP9 588 aa10.99□□□□□ -0.65
Pdgfra-208ENSMUST00000202681 Depdc5P61460 1591 aa10.99□□□□□ -0.65
Pdgfra-208ENSMUST00000202681 Gm32742A0A1B0GT42 1604 aa10.99□□□□□ -0.65
Pdgfra-208ENSMUST00000202681 Ppp2r3aB2RXC8 1150 aa10.99□□□□□ -0.65
Pdgfra-208ENSMUST00000202681 Abca8bQ8K440 1620 aa10.99□□□□□ -0.65
Pdgfra-208ENSMUST00000202681 Plcb2A3KGF7 1181 aa10.99□□□□□ -0.65
Pdgfra-208ENSMUST00000202681 Lekr1B2RVN1 116 aa10.99□□□□□ -0.65
Pdgfra-208ENSMUST00000202681 Ms4a5Q810P8 197 aa10.99□□□□□ -0.65
Pdgfra-208ENSMUST00000202681 Mlh3A0A1Y7VMP7 1443 aa10.98□□□□□ -0.65
Pdgfra-208ENSMUST00000202681 VgfQ0VGU4 617 aa10.98□□□□□ -0.65
Pdgfra-208ENSMUST00000202681 Fam43aQ8BUP8 424 aa10.98□□□□□ -0.65
Pdgfra-208ENSMUST00000202681 Dnajc5gQ8C632 165 aa10.98□□□□□ -0.65
Pdgfra-208ENSMUST00000202681 Iqgap1Q9JKF1 1657 aaKnown RBP10.98□□□□□ -0.65
Pdgfra-208ENSMUST00000202681 Gse1Q3U3C9 1213 aa10.98□□□□□ -0.65
Pdgfra-208ENSMUST00000202681 Polr3aB2RXC6 1390 aa10.98□□□□□ -0.65
Pdgfra-208ENSMUST00000202681 Tnnt2P50752 301 aa10.97□□□□□ -0.65
Pdgfra-208ENSMUST00000202681 Ylpm1Q9R0I7 1386 aaKnown RBP10.97□□□□□ -0.65
Pdgfra-208ENSMUST00000202681 Tarbp1E9Q368 1579 aa10.97□□□□□ -0.65
Pdgfra-208ENSMUST00000202681 Pank3Q8R2W9 370 aa10.97□□□□□ -0.65
Pdgfra-208ENSMUST00000202681 Ssh2Q5SW75 1423 aa10.96□□□□□ -0.65
Pdgfra-208ENSMUST00000202681 PrxO55103 1391 aa10.96□□□□□ -0.65
Pdgfra-208ENSMUST00000202681 Erich6D3Z6S9 713 aa10.96□□□□□ -0.65
Pdgfra-208ENSMUST00000202681 Terf2O35144 541 aa10.96□□□□□ -0.65
Pdgfra-208ENSMUST00000202681 Tcf3P15806 651 aa10.96□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 Map4P27546 1125 aaKnown RBP10.96□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 Rlbp1Q9Z275 317 aa10.96□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 Cdc42bpbQ7TT50 1713 aa10.96□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 Inpp5dQ9ES52 1191 aa10.95□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 Il16O54824 1322 aa10.95□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 Znf521Q6KAS7 1311 aa10.95□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 Ccdc30Q8BVF4 654 aa10.95□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 Trim26Q99PN3 545 aa10.95□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 Speer4f1Q9D5Q6 258 aa10.95□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 Zfyve16Q80U44 1528 aa10.95□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 Nup155Q99P88 1391 aaKnown RBP10.94□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 Kidins220E9Q9B7 1793 aa10.94□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 Abca9Q8K449 1623 aa10.94□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 Ubap1lG3UW59 384 aa10.94□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 Ddit3P35639 168 aa10.94□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 Zscan10Q3URR7 782 aa10.94□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 Pdcl2Q78Y63 240 aa10.94□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 Caskin1Q6P9K8 1431 aa10.94□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 Col17a1Q07563 1470 aa10.93□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 Rnf17Q99MV7 1640 aa10.93□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 Pank1Q8K4K6 548 aa10.93□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 TimelessQ9R1X4 1197 aa10.93□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 Ptch1Q61115 1434 aa10.93□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 Hoxd11P23813 323 aa10.93□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 Mknk2Q8CDB0 459 aa10.93□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 Igf1rQ60751 1373 aa10.93□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 Atf7ipQ7TT18 1306 aa10.92□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 Kif3bQ61771 747 aa10.92□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 Ppp2r1aQ76MZ3 589 aa10.92□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 Zbtb22Q9Z0G7 638 aa10.92□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 Duxf3A0A0N4SV92 674 aa10.92□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 Ush1cQ9ES64 910 aa10.92□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 Neurod2Q62414 383 aa10.91□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 Skida1Q80YR3 822 aa10.91□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 Gys2Q8VCB3 704 aa10.91□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 Rab3gap2Q8BMG7 1366 aa10.91□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 Mfap1aC0HKD8 439 aaKnown RBP10.91□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 Mfap1bC0HKD9 439 aaKnown RBP10.91□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 Lemd3Q9WU40 921 aa10.91□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 Usp19Q3UJD6 1360 aa10.9□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 Fbxo2Q80UW2 297 aa10.9□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 Kif2cQ922S8 721 aa10.9□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 Erich6bQ9D4S6 220 aa10.9□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 Spag9Q58A65 1321 aaKnown RBP10.9□□□□□ -0.66
Pdgfra-208ENSMUST00000202681 Dot1lQ6XZL8 1540 aa10.89□□□□□ -0.67
Pdgfra-208ENSMUST00000202681 Trim58Q5NCC9 485 aa10.89□□□□□ -0.67
Pdgfra-208ENSMUST00000202681 DekQ7TNV0 380 aaKnown RBP10.89□□□□□ -0.67
Pdgfra-208ENSMUST00000202681 Trpm2Q91YD4 1506 aa10.89□□□□□ -0.67
Pdgfra-208ENSMUST00000202681 Tmf1B9EKI3 1091 aa10.89□□□□□ -0.67
Pdgfra-208ENSMUST00000202681 Sall3Q62255 1320 aa10.88□□□□□ -0.67
Pdgfra-208ENSMUST00000202681 Fmn2Q9JL04 1578 aa10.88□□□□□ -0.67
Pdgfra-208ENSMUST00000202681 Pnmal2G3X9N3 661 aa10.88□□□□□ -0.67
Pdgfra-208ENSMUST00000202681 Rsph3aQ3UFY4 516 aa10.88□□□□□ -0.67
Pdgfra-208ENSMUST00000202681 Phlpp2Q8BXA7 1320 aa10.88□□□□□ -0.67
Pdgfra-208ENSMUST00000202681 Dnajc14Q921R4 703 aa10.87□□□□□ -0.67
Pdgfra-208ENSMUST00000202681 Abcc3B2RX12 1523 aa10.87□□□□□ -0.67
Pdgfra-208ENSMUST00000202681 Becn1O88597 448 aa10.87□□□□□ -0.67
Pdgfra-208ENSMUST00000202681 Nsfl1cQ9CZ44 370 aaKnown RBP10.87□□□□□ -0.67
Pdgfra-208ENSMUST00000202681 Ythdc1E9Q5K9 736 aaKnown RBP10.87□□□□□ -0.67
Pdgfra-208ENSMUST00000202681 Xrn1P97789 1719 aaKnown RBP10.86□□□□□ -0.67
Pdgfra-208ENSMUST00000202681 Kdm2aP59997 1161 aa10.86□□□□□ -0.67
Pdgfra-208ENSMUST00000202681 Fez1Q8K0X8 392 aa10.86□□□□□ -0.67
Pdgfra-208ENSMUST00000202681 Yeats2Q3TUF7 1407 aa10.86□□□□□ -0.67
Pdgfra-208ENSMUST00000202681 Atl3Q91YH5 541 aa10.86□□□□□ -0.67
Pdgfra-208ENSMUST00000202681 Kiaa1210E9Q0C6 1637 aa10.85□□□□□ -0.67
Pdgfra-208ENSMUST00000202681 ScaperF8VQ70 1398 aaKnown RBP10.85□□□□□ -0.67
Pdgfra-208ENSMUST00000202681 Fam135bQ9DAI6 1403 aa10.85□□□□□ -0.67
Pdgfra-208ENSMUST00000202681 Sbno1Q689Z5 1390 aa10.85□□□□□ -0.67
Pdgfra-208ENSMUST00000202681 Gm16486A0A1D5RMD1 1434 aa10.84□□□□□ -0.67
Pdgfra-208ENSMUST00000202681 Rfx1P48377 963 aa10.84□□□□□ -0.67
Pdgfra-208ENSMUST00000202681 Gas2l2Q5SSG4 860 aa10.84□□□□□ -0.67
Pdgfra-208ENSMUST00000202681 Gzf1Q4VBD9 706 aa10.84□□□□□ -0.67
Pdgfra-208ENSMUST00000202681 Tmx3Q8BXZ1 456 aa10.84□□□□□ -0.67
Pdgfra-208ENSMUST00000202681 Pdcd11Q6NS46 1862 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 22.6 ms