RNA–Protein interactions for RNA: ENSMUST00000159337.7

Vcan-205, Transcript of Versican core protein, mousemouse

TSL 1 (best) BASIC

Gene Vcan, Length 2,273 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-205ENSMUST00000159337 Nphp4P59240 1425 aa18.71■□□□□ 0.59
Vcan-205ENSMUST00000159337 NhsB1AV60 1647 aa18.71■□□□□ 0.59
Vcan-205ENSMUST00000159337 KdrP35918 1367 aa18.7■□□□□ 0.58
Vcan-205ENSMUST00000159337 Xrn1P97789 1719 aaKnown RBP18.7■□□□□ 0.58
Vcan-205ENSMUST00000159337 Gtf2e1Q9D0D5 440 aa18.7■□□□□ 0.58
Vcan-205ENSMUST00000159337 Sall3Q62255 1320 aa18.69■□□□□ 0.58
Vcan-205ENSMUST00000159337 Map3k5O35099 1380 aa18.68■□□□□ 0.58
Vcan-205ENSMUST00000159337 Dnttip2Q8R2M2 758 aaKnown RBP18.68■□□□□ 0.58
Vcan-205ENSMUST00000159337 Cdk5rap2Q8K389 1822 aa18.68■□□□□ 0.58
Vcan-205ENSMUST00000159337 Gm20521D3Z5F7 333 aa18.67■□□□□ 0.58
Vcan-205ENSMUST00000159337 Myo5cE9Q1F5 1742 aa18.67■□□□□ 0.58
Vcan-205ENSMUST00000159337 ArxO35085 564 aa18.67■□□□□ 0.58
Vcan-205ENSMUST00000159337 DnmbpQ6TXD4 1580 aa18.67■□□□□ 0.58
Vcan-205ENSMUST00000159337 Rrp9Q91WM3 475 aaKnown RBP18.67■□□□□ 0.58
Vcan-205ENSMUST00000159337 Atl3Q91YH5 541 aa18.67■□□□□ 0.58
Vcan-205ENSMUST00000159337 Myo3aQ8K3H5 1613 aa18.66■□□□□ 0.58
Vcan-205ENSMUST00000159337 Rims1Q99NE5 1463 aa18.66■□□□□ 0.58
Vcan-205ENSMUST00000159337 Erich6D3Z6S9 713 aa18.66■□□□□ 0.58
Vcan-205ENSMUST00000159337 Zfyve16Q80U44 1528 aa18.65■□□□□ 0.58
Vcan-205ENSMUST00000159337 IbtkQ6ZPR6 1352 aaKnown RBP18.65■□□□□ 0.58
Vcan-205ENSMUST00000159337 Abca8bQ8K440 1620 aa18.65■□□□□ 0.58
Vcan-205ENSMUST00000159337 Kidins220E9Q9B7 1793 aa18.65■□□□□ 0.58
Vcan-205ENSMUST00000159337 Phlpp2Q8BXA7 1320 aa18.64■□□□□ 0.58
Vcan-205ENSMUST00000159337 Usp40Q8BWR4 1235 aa18.64■□□□□ 0.57
Vcan-205ENSMUST00000159337 Atxn3Q9CVD2 355 aa18.64■□□□□ 0.57
Vcan-205ENSMUST00000159337 Tmem131lQ3U3D7 1597 aa18.64■□□□□ 0.57
Vcan-205ENSMUST00000159337 Os9Q8K2C7 672 aa18.63■□□□□ 0.57
Vcan-205ENSMUST00000159337 Iqgap3F8VQ29 1632 aa18.63■□□□□ 0.57
Vcan-205ENSMUST00000159337 Armcx1Q9CX83 456 aa18.63■□□□□ 0.57
Vcan-205ENSMUST00000159337 Abca8aQ8K442 1620 aa18.63■□□□□ 0.57
Vcan-205ENSMUST00000159337 Hfm1D3Z4R1 1434 aa18.62■□□□□ 0.57
Vcan-205ENSMUST00000159337 Adgrl3Q80TS3 1537 aa18.62■□□□□ 0.57
Vcan-205ENSMUST00000159337 Sipa1l1Q8C0T5 1782 aa18.61■□□□□ 0.57
Vcan-205ENSMUST00000159337 Adgrl1Q80TR1 1466 aa18.61■□□□□ 0.57
Vcan-205ENSMUST00000159337 Scaf11E9PZM7 1456 aaKnown RBP18.61■□□□□ 0.57
Vcan-205ENSMUST00000159337 Mcm4P49717 862 aa18.6■□□□□ 0.57
Vcan-205ENSMUST00000159337 GsdmaQ9EST1 446 aa18.6■□□□□ 0.57
Vcan-205ENSMUST00000159337 P2rx7Q9Z1M0 595 aa18.6■□□□□ 0.57
Vcan-205ENSMUST00000159337 Fndc1E9Q043 1732 aa18.6■□□□□ 0.57
Vcan-205ENSMUST00000159337 ErbinQ80TH2 1402 aa18.59■□□□□ 0.57
Vcan-205ENSMUST00000159337 Pnmal2G3X9N3 661 aa18.59■□□□□ 0.57
Vcan-205ENSMUST00000159337 Ncbp3Q8BZR9 615 aaKnown RBP18.59■□□□□ 0.57
Vcan-205ENSMUST00000159337 Fgd6Q69ZL1 1399 aa18.58■□□□□ 0.57
Vcan-205ENSMUST00000159337 Uggt1Q6P5E4 1551 aa18.58■□□□□ 0.57
Vcan-205ENSMUST00000159337 Trpm1Q2TV84 1622 aa18.58■□□□□ 0.57
Vcan-205ENSMUST00000159337 Catsper2A2ARP9 588 aa18.58■□□□□ 0.56
Vcan-205ENSMUST00000159337 Spryd3E9Q9B3 442 aa18.58■□□□□ 0.56
Vcan-205ENSMUST00000159337 Ttc37F8VPK0 1563 aa18.58■□□□□ 0.56
Vcan-205ENSMUST00000159337 Srpk2O54781 681 aaKnown RBP18.58■□□□□ 0.56
Vcan-205ENSMUST00000159337 Hs1bp3Q3TC93 395 aa18.58■□□□□ 0.56
Vcan-205ENSMUST00000159337 Ino80Q6ZPV2 1559 aa18.57■□□□□ 0.56
Vcan-205ENSMUST00000159337 Kif2cQ922S8 721 aa18.57■□□□□ 0.56
Vcan-205ENSMUST00000159337 Fan1Q69ZT1 1020 aa18.57■□□□□ 0.56
Vcan-205ENSMUST00000159337 Abca9Q8K449 1623 aa18.57■□□□□ 0.56
Vcan-205ENSMUST00000159337 Hecw2Q6I6G8 1578 aa18.56■□□□□ 0.56
Vcan-205ENSMUST00000159337 Terf2O35144 541 aa18.56■□□□□ 0.56
Vcan-205ENSMUST00000159337 Efcab6Q6P1E8 1516 aa18.56■□□□□ 0.56
Vcan-205ENSMUST00000159337 Abca6Q8K441 1624 aa18.55■□□□□ 0.56
Vcan-205ENSMUST00000159337 Znf608Q56A10 1511 aa18.55■□□□□ 0.56
Vcan-205ENSMUST00000159337 Ssh1Q76I79 1042 aa18.54■□□□□ 0.56
Vcan-205ENSMUST00000159337 Mfap1aC0HKD8 439 aaKnown RBP18.54■□□□□ 0.56
Vcan-205ENSMUST00000159337 Mfap1bC0HKD9 439 aaKnown RBP18.54■□□□□ 0.56
Vcan-205ENSMUST00000159337 Ksr2Q3UVC0 959 aa18.54■□□□□ 0.56
Vcan-205ENSMUST00000159337 Ccar1Q8CH18 1146 aaKnown RBP18.54■□□□□ 0.56
Vcan-205ENSMUST00000159337 Polr3glQ8R0C0 218 aa18.54■□□□□ 0.56
Vcan-205ENSMUST00000159337 Ttc21bQ0HA38 1315 aa18.54■□□□□ 0.56
Vcan-205ENSMUST00000159337 Eif2ak4Q9QZ05 1648 aa18.53■□□□□ 0.56
Vcan-205ENSMUST00000159337 Adgrb3Q80ZF8 1522 aa18.53■□□□□ 0.56
Vcan-205ENSMUST00000159337 Atp10dQ8K2X1 1416 aa18.53■□□□□ 0.56
Vcan-205ENSMUST00000159337 Cald1E9QA15 768 aaKnown RBP18.52■□□□□ 0.56
Vcan-205ENSMUST00000159337 MaddQ80U28 1577 aa18.52■□□□□ 0.56
Vcan-205ENSMUST00000159337 Il4rP16382 810 aa18.52■□□□□ 0.55
Vcan-205ENSMUST00000159337 Ehbp1l1Q99MS7 1716 aa18.52■□□□□ 0.55
Vcan-205ENSMUST00000159337 Med14A2ABV5 1459 aaKnown RBP18.52■□□□□ 0.55
Vcan-205ENSMUST00000159337 Isy1Q69ZQ2 285 aaKnown RBP18.51■□□□□ 0.55
Vcan-205ENSMUST00000159337 AatkQ80YE4 1365 aa18.51■□□□□ 0.55
Vcan-205ENSMUST00000159337 Nos1Q9Z0J4 1429 aa18.51■□□□□ 0.55
Vcan-205ENSMUST00000159337 Map7O88735 730 aa18.51■□□□□ 0.55
Vcan-205ENSMUST00000159337 InsrP15208 1372 aa18.49■□□□□ 0.55
Vcan-205ENSMUST00000159337 Cnga1P29974 684 aa18.49■□□□□ 0.55
Vcan-205ENSMUST00000159337 Prdm10Q3UTQ7 1184 aa18.49■□□□□ 0.55
Vcan-205ENSMUST00000159337 Cluap1Q8R3P7 413 aa18.49■□□□□ 0.55
Vcan-205ENSMUST00000159337 AU019823E9PUQ3 292 aa18.48■□□□□ 0.55
Vcan-205ENSMUST00000159337 Ppp1r3fQ9JIG4 799 aa18.48■□□□□ 0.55
Vcan-205ENSMUST00000159337 Paxip1Q6NZQ4 1056 aa18.48■□□□□ 0.55
Vcan-205ENSMUST00000159337 Stk24Q99KH8 431 aa18.48■□□□□ 0.55
Vcan-205ENSMUST00000159337 Skint5A7XUY5 1461 aa18.48■□□□□ 0.55
Vcan-205ENSMUST00000159337 Apaf1O88879 1249 aa18.47■□□□□ 0.55
Vcan-205ENSMUST00000159337 Plxnc1Q9QZC2 1574 aa18.47■□□□□ 0.55
Vcan-205ENSMUST00000159337 Rbm25B2RY56 838 aaKnown RBP18.47■□□□□ 0.55
Vcan-205ENSMUST00000159337 Ddit3P35639 168 aa18.47■□□□□ 0.55
Vcan-205ENSMUST00000159337 Puf60Q3UEB3 564 aaKnown RBP18.47■□□□□ 0.55
Vcan-205ENSMUST00000159337 Ift172Q6VH22 1749 aa18.46■□□□□ 0.55
Vcan-205ENSMUST00000159337 Kif3bQ61771 747 aa18.46■□□□□ 0.55
Vcan-205ENSMUST00000159337 Trim26Q99PN3 545 aa18.46■□□□□ 0.55
Vcan-205ENSMUST00000159337 Ncapd2Q8K2Z4 1392 aa18.46■□□□□ 0.55
Vcan-205ENSMUST00000159337 Kif18aQ91WD7 886 aa18.45■□□□□ 0.54
Vcan-205ENSMUST00000159337 Cfap65Q3V0B4 1847 aa18.45■□□□□ 0.54
Vcan-205ENSMUST00000159337 Znf518aB2RRF6 1478 aaKnown RBP18.44■□□□□ 0.54
Vcan-205ENSMUST00000159337 Kiaa0556Q8C753 1610 aa18.44■□□□□ 0.54
Retrieved 100 of 22,080 RNA–protein pairs in 14.1 ms