RNA–Protein interactions for RNA: ENSMUST00000145482.7

Prpf40b-212, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,308 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-212ENSMUST00000145482 Abca6Q8K441 1624 aa20.76■□□□□ 0.91
Prpf40b-212ENSMUST00000145482 Rock2P70336 1388 aa20.75■□□□□ 0.91
Prpf40b-212ENSMUST00000145482 KarsQ99MN1 595 aaKnown RBP20.75■□□□□ 0.91
Prpf40b-212ENSMUST00000145482 PrxO55103 1391 aa20.75■□□□□ 0.91
Prpf40b-212ENSMUST00000145482 RereQ80TZ9 1558 aa20.75■□□□□ 0.91
Prpf40b-212ENSMUST00000145482 Cnga1P29974 684 aa20.75■□□□□ 0.91
Prpf40b-212ENSMUST00000145482 Gas2l2Q5SSG4 860 aa20.74■□□□□ 0.91
Prpf40b-212ENSMUST00000145482 Stk26Q99JT2 416 aa20.74■□□□□ 0.91
Prpf40b-212ENSMUST00000145482 MyclP10166 368 aa20.73■□□□□ 0.91
Prpf40b-212ENSMUST00000145482 Trim44Q9QXA7 346 aa20.73■□□□□ 0.91
Prpf40b-212ENSMUST00000145482 Kdm2bQ6P1G2 1309 aa20.73■□□□□ 0.91
Prpf40b-212ENSMUST00000145482 Robo2Q7TPD3 1470 aa20.73■□□□□ 0.91
Prpf40b-212ENSMUST00000145482 Cluap1Q8R3P7 413 aa20.73■□□□□ 0.91
Prpf40b-212ENSMUST00000145482 Rbm10Q99KG3 930 aaKnown RBP20.73■□□□□ 0.91
Prpf40b-212ENSMUST00000145482 Lmod3E9QA62 571 aa20.72■□□□□ 0.91
Prpf40b-212ENSMUST00000145482 Ccdc183A2AJB1 534 aa20.71■□□□□ 0.91
Prpf40b-212ENSMUST00000145482 Polr3aB2RXC6 1390 aa20.71■□□□□ 0.91
Prpf40b-212ENSMUST00000145482 AatkQ80YE4 1365 aa20.7■□□□□ 0.9
Prpf40b-212ENSMUST00000145482 Ppp2r1aQ76MZ3 589 aa20.7■□□□□ 0.9
Prpf40b-212ENSMUST00000145482 Ccdc30Q8BVF4 654 aa20.7■□□□□ 0.9
Prpf40b-212ENSMUST00000145482 Abca17E9PX95 1733 aa20.69■□□□□ 0.9
Prpf40b-212ENSMUST00000145482 Smc5Q8CG46 1101 aaKnown RBP20.69■□□□□ 0.9
Prpf40b-212ENSMUST00000145482 Mbd3Q9Z2D8 285 aaKnown RBP20.69■□□□□ 0.9
Prpf40b-212ENSMUST00000145482 Srcin1Q9QWI6 1250 aa20.68■□□□□ 0.9
Prpf40b-212ENSMUST00000145482 Tmf1B9EKI3 1091 aa20.68■□□□□ 0.9
Prpf40b-212ENSMUST00000145482 NpatQ8BMA5 1420 aa20.67■□□□□ 0.9
Prpf40b-212ENSMUST00000145482 DroshaQ5HZJ0 1373 aaKnown RBP20.67■□□□□ 0.9
Prpf40b-212ENSMUST00000145482 MlecQ6ZQI3 291 aaKnown RBP20.67■□□□□ 0.9
Prpf40b-212ENSMUST00000145482 Usp40Q8BWR4 1235 aa20.67■□□□□ 0.9
Prpf40b-212ENSMUST00000145482 Il4rP16382 810 aa20.66■□□□□ 0.9
Prpf40b-212ENSMUST00000145482 Myo5cE9Q1F5 1742 aa20.66■□□□□ 0.9
Prpf40b-212ENSMUST00000145482 AnkarA2RT91 1465 aa20.66■□□□□ 0.9
Prpf40b-212ENSMUST00000145482 Zfp91Q62511 572 aa20.66■□□□□ 0.9
Prpf40b-212ENSMUST00000145482 Tnpo1Q8BFY9 898 aaKnown RBP20.66■□□□□ 0.9
Prpf40b-212ENSMUST00000145482 Abcc6Q9R1S7 1498 aa20.66■□□□□ 0.9
Prpf40b-212ENSMUST00000145482 Prex1Q69ZK0 1650 aa20.64■□□□□ 0.9
Prpf40b-212ENSMUST00000145482 AU022751B1B0V2 589 aa20.63■□□□□ 0.89
Prpf40b-212ENSMUST00000145482 Phf14Q9D4H9 881 aa20.63■□□□□ 0.89
Prpf40b-212ENSMUST00000145482 Zmym4A2A791 1549 aaKnown RBP20.63■□□□□ 0.89
Prpf40b-212ENSMUST00000145482 Mbd5B1AYB6 1498 aa20.63■□□□□ 0.89
Prpf40b-212ENSMUST00000145482 Puf60Q3UEB3 564 aaKnown RBP20.63■□□□□ 0.89
Prpf40b-212ENSMUST00000145482 Shq1Q7TMX5 569 aa20.63■□□□□ 0.89
Prpf40b-212ENSMUST00000145482 Mink1Q9JM52 1308 aa20.62■□□□□ 0.89
Prpf40b-212ENSMUST00000145482 Pnmal2G3X9N3 661 aa20.62■□□□□ 0.89
Prpf40b-212ENSMUST00000145482 Gtf2e1Q9D0D5 440 aa20.62■□□□□ 0.89
Prpf40b-212ENSMUST00000145482 Adamts13Q769J6 1426 aa20.62■□□□□ 0.89
Prpf40b-212ENSMUST00000145482 Mfap1aC0HKD8 439 aaKnown RBP20.61■□□□□ 0.89
Prpf40b-212ENSMUST00000145482 Mfap1bC0HKD9 439 aaKnown RBP20.61■□□□□ 0.89
Prpf40b-212ENSMUST00000145482 Stag3O70576 1240 aa20.61■□□□□ 0.89
Prpf40b-212ENSMUST00000145482 Senp3Q9EP97 568 aaKnown RBP20.61■□□□□ 0.89
Prpf40b-212ENSMUST00000145482 RalgapbQ8BQZ4 1484 aa20.61■□□□□ 0.89
Prpf40b-212ENSMUST00000145482 Atxn3Q9CVD2 355 aa20.61■□□□□ 0.89
Prpf40b-212ENSMUST00000145482 Q9D9H8 365 aa20.61■□□□□ 0.89
Prpf40b-212ENSMUST00000145482 Cdc42bpgQ80UW5 1551 aa20.61■□□□□ 0.89
Prpf40b-212ENSMUST00000145482 Ppp1r9bQ6R891 817 aaKnown RBP20.6■□□□□ 0.89
Prpf40b-212ENSMUST00000145482 Hecw2Q6I6G8 1578 aa20.6■□□□□ 0.89
Prpf40b-212ENSMUST00000145482 Cpsf1Q9EPU4 1441 aaKnown RBP20.6■□□□□ 0.89
Prpf40b-212ENSMUST00000145482 Txndc2Q6P902 515 aa20.6■□□□□ 0.89
Prpf40b-212ENSMUST00000145482 Plekhh1Q80TI1 1356 aa20.59■□□□□ 0.89
Prpf40b-212ENSMUST00000145482 AdgbG3UZ78 1657 aa20.59■□□□□ 0.89
Prpf40b-212ENSMUST00000145482 TnikP83510 1323 aa20.59■□□□□ 0.89
Prpf40b-212ENSMUST00000145482 Topbp1Q6ZQF0 1515 aa20.59■□□□□ 0.89
Prpf40b-212ENSMUST00000145482 Tulp4Q9JIL5 1547 aa20.59■□□□□ 0.89
Prpf40b-212ENSMUST00000145482 Rrp12Q6P5B0 1295 aaKnown RBP20.58■□□□□ 0.89
Prpf40b-212ENSMUST00000145482 Golga2Q921M4 999 aa20.58■□□□□ 0.89
Prpf40b-212ENSMUST00000145482 Mapk8ip3Q9ESN9 1337 aa20.58■□□□□ 0.89
Prpf40b-212ENSMUST00000145482 Znf330Q922H9 316 aa20.57■□□□□ 0.88
Prpf40b-212ENSMUST00000145482 Ppip5k1A2ARP1 1436 aa20.57■□□□□ 0.88
Prpf40b-212ENSMUST00000145482 Plch2A2AP18 1501 aa20.57■□□□□ 0.88
Prpf40b-212ENSMUST00000145482 Rlbp1Q9Z275 317 aa20.56■□□□□ 0.88
Prpf40b-212ENSMUST00000145482 Asxl2Q8BZ32 1370 aa20.56■□□□□ 0.88
Prpf40b-212ENSMUST00000145482 Erich6bQ9D4S6 220 aa20.56■□□□□ 0.88
Prpf40b-212ENSMUST00000145482 Kif7B7ZNG0 1348 aa20.56■□□□□ 0.88
Prpf40b-212ENSMUST00000145482 Uggt2E9Q4X2 1504 aa20.56■□□□□ 0.88
Prpf40b-212ENSMUST00000145482 Pdia4P08003 638 aaKnown RBP20.55■□□□□ 0.88
Prpf40b-212ENSMUST00000145482 Ssh1Q76I79 1042 aa20.55■□□□□ 0.88
Prpf40b-212ENSMUST00000145482 PogkQ80TC5 607 aa20.55■□□□□ 0.88
Prpf40b-212ENSMUST00000145482 Fam184bQ0KK56 942 aa20.54■□□□□ 0.88
Prpf40b-212ENSMUST00000145482 Cul9Q80TT8 1865 aa20.54■□□□□ 0.88
Prpf40b-212ENSMUST00000145482 Qser1A2BIE1 1698 aa20.53■□□□□ 0.88
Prpf40b-212ENSMUST00000145482 Rfx1P48377 963 aa20.53■□□□□ 0.88
Prpf40b-212ENSMUST00000145482 Hfm1D3Z4R1 1434 aa20.53■□□□□ 0.88
Prpf40b-212ENSMUST00000145482 Psme1P97371 249 aa20.53■□□□□ 0.88
Prpf40b-212ENSMUST00000145482 Pdlim2Q8R1G6 349 aa20.53■□□□□ 0.88
Prpf40b-212ENSMUST00000145482 Mcm4P49717 862 aa20.52■□□□□ 0.87
Prpf40b-212ENSMUST00000145482 Skint5A7XUY5 1461 aa20.51■□□□□ 0.87
Prpf40b-212ENSMUST00000145482 Irf5P56477 497 aa20.51■□□□□ 0.87
Prpf40b-212ENSMUST00000145482 Zranb1Q7M760 708 aa20.51■□□□□ 0.87
Prpf40b-212ENSMUST00000145482 Stard8Q8K031 1019 aa20.5■□□□□ 0.87
Prpf40b-212ENSMUST00000145482 Vgll3P85442 326 aa20.5■□□□□ 0.87
Prpf40b-212ENSMUST00000145482 Iqgap3F8VQ29 1632 aa20.5■□□□□ 0.87
Prpf40b-212ENSMUST00000145482 Kiaa0556Q8C753 1610 aa20.49■□□□□ 0.87
Prpf40b-212ENSMUST00000145482 Prrc2bQ7TPM1 1486 aaKnown RBP20.49■□□□□ 0.87
Prpf40b-212ENSMUST00000145482 IqubQ8CDK3 788 aa20.48■□□□□ 0.87
Prpf40b-212ENSMUST00000145482 Utp14aQ640M1 767 aaKnown RBP20.48■□□□□ 0.87
Prpf40b-212ENSMUST00000145482 Duxf3A0A0N4SV92 674 aa20.48■□□□□ 0.87
Prpf40b-212ENSMUST00000145482 Sptbn5F6UCX4 1208 aa20.47■□□□□ 0.87
Prpf40b-212ENSMUST00000145482 Dusp27Q148W8 1138 aa20.47■□□□□ 0.87
Prpf40b-212ENSMUST00000145482 Talpid3E9PV87 1520 aa20.47■□□□□ 0.87
Prpf40b-212ENSMUST00000145482 Ksr2Q3UVC0 959 aa20.47■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 124.4 ms