RNA–Protein interactions for RNA: ENSMUST00000132214.7

Ccdc38-203, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc38, Length 2,222 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-203ENSMUST00000132214 Cep162Q6ZQ06 1403 aa8.86□□□□□ -0.99
Ccdc38-203ENSMUST00000132214 Pdcd7Q9WTY1 482 aa8.86□□□□□ -0.99
Ccdc38-203ENSMUST00000132214 Adamts12Q811B3 1600 aa8.86□□□□□ -0.99
Ccdc38-203ENSMUST00000132214 SowahdQ8BY98 327 aa8.86□□□□□ -0.99
Ccdc38-203ENSMUST00000132214 Slx4Q6P1D7 1565 aa8.86□□□□□ -0.99
Ccdc38-203ENSMUST00000132214 Alpk3Q924C5 1678 aa8.85□□□□□ -0.99
Ccdc38-203ENSMUST00000132214 Abl2Q4JIM5 1182 aa8.85□□□□□ -0.99
Ccdc38-203ENSMUST00000132214 Crim1Q9JLL0 1037 aa8.85□□□□□ -0.99
Ccdc38-203ENSMUST00000132214 Cfap70D3YVL2 1141 aa8.85□□□□□ -0.99
Ccdc38-203ENSMUST00000132214 Eif4g1Q6NZJ6 1600 aaKnown RBP8.84□□□□□ -0.99
Ccdc38-203ENSMUST00000132214 Arid3cA6PWV5 409 aa8.84□□□□□ -0.99
Ccdc38-203ENSMUST00000132214 Gtf2a1Q99PM3 378 aa8.84□□□□□ -0.99
Ccdc38-203ENSMUST00000132214 Trim26Q99PN3 545 aa8.84□□□□□ -0.99
Ccdc38-203ENSMUST00000132214 DmtnQ9WV69 405 aa8.84□□□□□ -0.99
Ccdc38-203ENSMUST00000132214 Pxylp1Q8BHA9 480 aa8.83□□□□□ -1
Ccdc38-203ENSMUST00000132214 Depdc5P61460 1591 aa8.83□□□□□ -1
Ccdc38-203ENSMUST00000132214 Zfyve16Q80U44 1528 aa8.82□□□□□ -1
Ccdc38-203ENSMUST00000132214 Mfap1aC0HKD8 439 aaKnown RBP8.82□□□□□ -1
Ccdc38-203ENSMUST00000132214 Mfap1bC0HKD9 439 aaKnown RBP8.82□□□□□ -1
Ccdc38-203ENSMUST00000132214 Igf1rQ60751 1373 aa8.82□□□□□ -1
Ccdc38-203ENSMUST00000132214 Dmrta2A2A9A2 531 aa8.82□□□□□ -1
Ccdc38-203ENSMUST00000132214 BcanQ61361 883 aa8.82□□□□□ -1
Ccdc38-203ENSMUST00000132214 Rpap1Q80TE0 1409 aa8.82□□□□□ -1
Ccdc38-203ENSMUST00000132214 Ccdc85aQ5SP85 500 aa8.81□□□□□ -1
Ccdc38-203ENSMUST00000132214 NgefQ8CHT1 710 aa8.81□□□□□ -1
Ccdc38-203ENSMUST00000132214 Lrrc9Q8CDN9 1456 aa8.8□□□□□ -1
Ccdc38-203ENSMUST00000132214 Prpmp5E9PXN1 296 aa8.8□□□□□ -1
Ccdc38-203ENSMUST00000132214 MlecQ6ZQI3 291 aaKnown RBP8.8□□□□□ -1
Ccdc38-203ENSMUST00000132214 Pcdhb16Q91Y03 802 aa8.8□□□□□ -1
Ccdc38-203ENSMUST00000132214 Fndc1E9Q043 1732 aa8.8□□□□□ -1
Ccdc38-203ENSMUST00000132214 GapdhsQ64467 440 aa8.8□□□□□ -1
Ccdc38-203ENSMUST00000132214 Limd1Q9QXD8 668 aa8.8□□□□□ -1
Ccdc38-203ENSMUST00000132214 Cyb5rlB1AS42 316 aa8.79□□□□□ -1
Ccdc38-203ENSMUST00000132214 SmapQ9R0P4 181 aaKnown RBP8.79□□□□□ -1
Ccdc38-203ENSMUST00000132214 Mroh2bQ7M6Y6 1581 aa8.79□□□□□ -1
Ccdc38-203ENSMUST00000132214 Armc3A2AU72 881 aa8.78□□□□□ -1
Ccdc38-203ENSMUST00000132214 Rrp9Q91WM3 475 aaKnown RBP8.78□□□□□ -1
Ccdc38-203ENSMUST00000132214 Lemd3Q9WU40 921 aa8.78□□□□□ -1
Ccdc38-203ENSMUST00000132214 Vgll3P85442 326 aa8.78□□□□□ -1
Ccdc38-203ENSMUST00000132214 Creld1Q91XD7 420 aa8.78□□□□□ -1
Ccdc38-203ENSMUST00000132214 Gm7298A0A0N4SVU1 1476 aa8.78□□□□□ -1
Ccdc38-203ENSMUST00000132214 Cyp8b1O88962 500 aa8.77□□□□□ -1.01
Ccdc38-203ENSMUST00000132214 Hdac6Q9Z2V5 1149 aa8.77□□□□□ -1.01
Ccdc38-203ENSMUST00000132214 Wdr7Q920I9 1489 aa8.77□□□□□ -1.01
Ccdc38-203ENSMUST00000132214 Kdm5bQ80Y84 1544 aa8.77□□□□□ -1.01
Ccdc38-203ENSMUST00000132214 Col9a1Q05722 921 aa8.77□□□□□ -1.01
Ccdc38-203ENSMUST00000132214 Carmil1Q6EDY6 1374 aa8.77□□□□□ -1.01
Ccdc38-203ENSMUST00000132214 Sirt1Q923E4 737 aa8.77□□□□□ -1.01
Ccdc38-203ENSMUST00000132214 Arhgap35Q91YM2 1499 aa8.76□□□□□ -1.01
Ccdc38-203ENSMUST00000132214 Rgs9O54828 675 aa8.76□□□□□ -1.01
Ccdc38-203ENSMUST00000132214 Gtf3c6Q9D8P7 227 aa8.76□□□□□ -1.01
Ccdc38-203ENSMUST00000132214 Nudt12Q9DCN1 462 aa8.76□□□□□ -1.01
Ccdc38-203ENSMUST00000132214 Kdm2bQ6P1G2 1309 aa8.76□□□□□ -1.01
Ccdc38-203ENSMUST00000132214 Rbm46P86049 533 aa8.76□□□□□ -1.01
Ccdc38-203ENSMUST00000132214 Dnm1lQ8K1M6 742 aa8.76□□□□□ -1.01
Ccdc38-203ENSMUST00000132214 Rrbp1Q99PL5 1605 aaKnown RBP8.75□□□□□ -1.01
Ccdc38-203ENSMUST00000132214 Hsp90aa1P07901 733 aaKnown RBP8.75□□□□□ -1.01
Ccdc38-203ENSMUST00000132214 Dpp8Q80YA7 892 aa8.75□□□□□ -1.01
Ccdc38-203ENSMUST00000132214 TsksO54887 585 aa8.74□□□□□ -1.01
Ccdc38-203ENSMUST00000132214 Fndc3aQ8BX90 1198 aa8.74□□□□□ -1.01
Ccdc38-203ENSMUST00000132214 Usp3Q91W36 520 aaKnown RBP8.74□□□□□ -1.01
Ccdc38-203ENSMUST00000132214 Znf608Q56A10 1511 aa8.74□□□□□ -1.01
Ccdc38-203ENSMUST00000132214 WrnO09053 1401 aa8.74□□□□□ -1.01
Ccdc38-203ENSMUST00000132214 ClspnQ80YR7 1315 aa8.73□□□□□ -1.01
Ccdc38-203ENSMUST00000132214 Adamts19P59509 1210 aa8.73□□□□□ -1.01
Ccdc38-203ENSMUST00000132214 Igflr1Q3U4N7 345 aa8.73□□□□□ -1.01
Ccdc38-203ENSMUST00000132214 Lgr5Q9Z1P4 907 aa8.73□□□□□ -1.01
Ccdc38-203ENSMUST00000132214 AglF8VPN4 1532 aa8.73□□□□□ -1.01
Ccdc38-203ENSMUST00000132214 Map3k1P53349 1493 aa8.73□□□□□ -1.01
Ccdc38-203ENSMUST00000132214 Samd1D3YXK1 519 aa8.73□□□□□ -1.01
Ccdc38-203ENSMUST00000132214 Abca5Q8K448 1642 aa8.73□□□□□ -1.01
Ccdc38-203ENSMUST00000132214 Chtf18Q8BIW9 969 aa8.72□□□□□ -1.01
Ccdc38-203ENSMUST00000132214 Dnajc5gQ8C632 165 aa8.72□□□□□ -1.01
Ccdc38-203ENSMUST00000132214 Clip1Q922J3 1391 aa8.72□□□□□ -1.01
Ccdc38-203ENSMUST00000132214 Nolc1E9Q5C9 702 aaKnown RBP8.72□□□□□ -1.01
Ccdc38-203ENSMUST00000132214 Fam43aQ8BUP8 424 aa8.71□□□□□ -1.02
Ccdc38-203ENSMUST00000132214 Polr1aO35134 1717 aaKnown RBP8.71□□□□□ -1.02
Ccdc38-203ENSMUST00000132214 Rnf17Q99MV7 1640 aa8.7□□□□□ -1.02
Ccdc38-203ENSMUST00000132214 Dsc3P55850 896 aa8.7□□□□□ -1.02
Ccdc38-203ENSMUST00000132214 DekQ7TNV0 380 aaKnown RBP8.7□□□□□ -1.02
Ccdc38-203ENSMUST00000132214 Atp10dQ8K2X1 1416 aa8.7□□□□□ -1.02
Ccdc38-203ENSMUST00000132214 Ercc6l2Q9JIM3 1537 aa8.7□□□□□ -1.02
Ccdc38-203ENSMUST00000132214 Kdm6bQ5NCY0 1641 aa8.7□□□□□ -1.02
Ccdc38-203ENSMUST00000132214 Rbm25B2RY56 838 aaKnown RBP8.69□□□□□ -1.02
Ccdc38-203ENSMUST00000132214 Hsd17b7O88736 334 aa8.69□□□□□ -1.02
Ccdc38-203ENSMUST00000132214 Ccdc61Q3UJV1 511 aa8.69□□□□□ -1.02
Ccdc38-203ENSMUST00000132214 4933402E13RikQ9D4D2 429 aa8.69□□□□□ -1.02
Ccdc38-203ENSMUST00000132214 NhsB1AV60 1647 aa8.68□□□□□ -1.02
Ccdc38-203ENSMUST00000132214 Pcdhgb4Q91XX6 912 aa8.68□□□□□ -1.02
Ccdc38-203ENSMUST00000132214 SafbD3YXK2 937 aaKnown RBP8.68□□□□□ -1.02
Ccdc38-203ENSMUST00000132214 Scnn1aQ61180 699 aa8.68□□□□□ -1.02
Ccdc38-203ENSMUST00000132214 Brwd3A2AHJ4 1799 aa8.67□□□□□ -1.02
Ccdc38-203ENSMUST00000132214 Arhgap31A6X8Z5 1425 aa8.67□□□□□ -1.02
Ccdc38-203ENSMUST00000132214 Ivns1abpQ920Q8 642 aa8.67□□□□□ -1.02
Ccdc38-203ENSMUST00000132214 Ccdc141E9Q8Q6 1531 aa8.67□□□□□ -1.02
Ccdc38-203ENSMUST00000132214 Hecw2Q6I6G8 1578 aa8.67□□□□□ -1.02
Ccdc38-203ENSMUST00000132214 Naip2Q9QUK4 1447 aa8.66□□□□□ -1.02
Ccdc38-203ENSMUST00000132214 Wdr66E9Q743 1299 aa8.66□□□□□ -1.02
Ccdc38-203ENSMUST00000132214 Stk11ipQ3TAA7 1072 aa8.66□□□□□ -1.02
Ccdc38-203ENSMUST00000132214 Q8C6G1 249 aa8.66□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 547.5 ms