RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 BccipQ9CWI3 316 aa18.76■□□□□ 0.59
Pcdha9-201ENSMUST00000115659 Zfp644E9QA22 1323 aa18.75■□□□□ 0.59
Pcdha9-201ENSMUST00000115659 MlecQ6ZQI3 291 aaKnown RBP18.75■□□□□ 0.59
Pcdha9-201ENSMUST00000115659 AnlnQ8K298 1121 aaKnown RBP18.75■□□□□ 0.59
Pcdha9-201ENSMUST00000115659 Ftsj3Q9DBE9 838 aaKnown RBP18.75■□□□□ 0.59
Pcdha9-201ENSMUST00000115659 PogkQ80TC5 607 aa18.74■□□□□ 0.59
Pcdha9-201ENSMUST00000115659 NexnQ7TPW1 607 aa18.74■□□□□ 0.59
Pcdha9-201ENSMUST00000115659 Atp2b2Q9R0K7 1198 aa18.74■□□□□ 0.59
Pcdha9-201ENSMUST00000115659 Cfdp1O88271 295 aaKnown RBP18.74■□□□□ 0.59
Pcdha9-201ENSMUST00000115659 Fyb1O35601 819 aa18.73■□□□□ 0.59
Pcdha9-201ENSMUST00000115659 Gcc1Q9D4H2 778 aa18.73■□□□□ 0.59
Pcdha9-201ENSMUST00000115659 Arap1Q4LDD4 1452 aa18.73■□□□□ 0.59
Pcdha9-201ENSMUST00000115659 PdcQ9QW08 244 aa18.73■□□□□ 0.59
Pcdha9-201ENSMUST00000115659 Cfap99A0A140LIX9 648 aa18.73■□□□□ 0.59
Pcdha9-201ENSMUST00000115659 Nectin2P32507 530 aa18.73■□□□□ 0.59
Pcdha9-201ENSMUST00000115659 Zrsr2Q62377 462 aaKnown RBP18.72■□□□□ 0.59
Pcdha9-201ENSMUST00000115659 Tnpo1Q8BFY9 898 aaKnown RBP18.72■□□□□ 0.59
Pcdha9-201ENSMUST00000115659 Ttll5Q8CHB8 1328 aa18.72■□□□□ 0.59
Pcdha9-201ENSMUST00000115659 Tomm22Q9CPQ3 142 aa18.72■□□□□ 0.59
Pcdha9-201ENSMUST00000115659 Znhit6Q3UFB2 460 aaKnown RBP18.71■□□□□ 0.59
Pcdha9-201ENSMUST00000115659 Dixdc1Q80Y83 711 aa18.71■□□□□ 0.59
Pcdha9-201ENSMUST00000115659 Zkscan1Q8BGS3 561 aaKnown RBP18.71■□□□□ 0.59
Pcdha9-201ENSMUST00000115659 Il16O54824 1322 aa18.71■□□□□ 0.59
Pcdha9-201ENSMUST00000115659 Pabpn1Q8CCS6 302 aaKnown RBP18.7■□□□□ 0.58
Pcdha9-201ENSMUST00000115659 Mad1l1Q9WTX8 717 aaKnown RBP18.7■□□□□ 0.58
Pcdha9-201ENSMUST00000115659 Hap1O35668 628 aa18.7■□□□□ 0.58
Pcdha9-201ENSMUST00000115659 Neurod6P48986 337 aa18.7■□□□□ 0.58
Pcdha9-201ENSMUST00000115659 Cc2d2aQ8CFW7 1633 aa18.7■□□□□ 0.58
Pcdha9-201ENSMUST00000115659 CrcpO35427 148 aa18.7■□□□□ 0.58
Pcdha9-201ENSMUST00000115659 Drc7Q6V3W6 876 aa18.7■□□□□ 0.58
Pcdha9-201ENSMUST00000115659 Vps53Q8CCB4 832 aa18.69■□□□□ 0.58
Pcdha9-201ENSMUST00000115659 Gcom1E9PZ54 550 aa18.69■□□□□ 0.58
Pcdha9-201ENSMUST00000115659 MyzapQ3UIJ9 466 aa18.69■□□□□ 0.58
Pcdha9-201ENSMUST00000115659 Nutm1Q8BHP2 1126 aa18.68■□□□□ 0.58
Pcdha9-201ENSMUST00000115659 Rad54l2Q99NG0 1466 aa18.68■□□□□ 0.58
Pcdha9-201ENSMUST00000115659 Duox2A2AQ99 1517 aa18.68■□□□□ 0.58
Pcdha9-201ENSMUST00000115659 Odf2A3KGV1 830 aaKnown RBP18.67■□□□□ 0.58
Pcdha9-201ENSMUST00000115659 Tubb6Q922F4 447 aa18.67■□□□□ 0.58
Pcdha9-201ENSMUST00000115659 Trim29Q8R2Q0 587 aa18.67■□□□□ 0.58
Pcdha9-201ENSMUST00000115659 Gnl3lQ6PGG6 577 aaKnown RBP18.66■□□□□ 0.58
Pcdha9-201ENSMUST00000115659 Arhgap31A6X8Z5 1425 aa18.66■□□□□ 0.58
Pcdha9-201ENSMUST00000115659 Dhx8A2A4P0 1244 aaKnown RBP18.66■□□□□ 0.58
Pcdha9-201ENSMUST00000115659 HypkQ9CR41 129 aa18.66■□□□□ 0.58
Pcdha9-201ENSMUST00000115659 Phf14Q9D4H9 881 aa18.66■□□□□ 0.58
Pcdha9-201ENSMUST00000115659 Arhgap5P97393 1501 aa18.66■□□□□ 0.58
Pcdha9-201ENSMUST00000115659 Wdr78E9PYY5 807 aa18.65■□□□□ 0.58
Pcdha9-201ENSMUST00000115659 Fam163aQ8CAA5 168 aa18.65■□□□□ 0.58
Pcdha9-201ENSMUST00000115659 Rrp9Q91WM3 475 aaKnown RBP18.65■□□□□ 0.58
Pcdha9-201ENSMUST00000115659 UvssaQ9D479 717 aa18.65■□□□□ 0.58
Pcdha9-201ENSMUST00000115659 Chmp4cQ9D7F7 232 aa18.65■□□□□ 0.58
Pcdha9-201ENSMUST00000115659 Gm7298A0A0N4SVU1 1476 aa18.65■□□□□ 0.58
Pcdha9-201ENSMUST00000115659 Hnrnpul1Q8VDM6 859 aaKnown RBP18.65■□□□□ 0.58
Pcdha9-201ENSMUST00000115659 Anp32eP97822 260 aaKnown RBP18.64■□□□□ 0.58
Pcdha9-201ENSMUST00000115659 Tiam1Q60610 1591 aa18.64■□□□□ 0.58
Pcdha9-201ENSMUST00000115659 Dhx16G3X8X0 1044 aaKnown RBP18.64■□□□□ 0.57
Pcdha9-201ENSMUST00000115659 Gnai2P08752 355 aaKnown RBP18.64■□□□□ 0.57
Pcdha9-201ENSMUST00000115659 TatQ8QZR1 454 aa18.64■□□□□ 0.57
Pcdha9-201ENSMUST00000115659 Usp48Q3V0C5 1052 aa18.64■□□□□ 0.57
Pcdha9-201ENSMUST00000115659 Necab1Q8BG18 352 aa18.64■□□□□ 0.57
Pcdha9-201ENSMUST00000115659 Pknox2Q8BG99 474 aa18.64■□□□□ 0.57
Pcdha9-201ENSMUST00000115659 Rnf214Q8BFU3 668 aaKnown RBP18.63■□□□□ 0.57
Pcdha9-201ENSMUST00000115659 Fez1Q8K0X8 392 aa18.63■□□□□ 0.57
Pcdha9-201ENSMUST00000115659 Q9D9H8 365 aa18.63■□□□□ 0.57
Pcdha9-201ENSMUST00000115659 Mroh2bQ7M6Y6 1581 aa18.63■□□□□ 0.57
Pcdha9-201ENSMUST00000115659 Kif3cO35066 796 aa18.63■□□□□ 0.57
Pcdha9-201ENSMUST00000115659 Me1P06801 572 aa18.63■□□□□ 0.57
Pcdha9-201ENSMUST00000115659 OptnQ8K3K8 584 aa18.63■□□□□ 0.57
Pcdha9-201ENSMUST00000115659 Nphp1Q9QY53 687 aa18.62■□□□□ 0.57
Pcdha9-201ENSMUST00000115659 Cdkn1cP49919 348 aa18.62■□□□□ 0.57
Pcdha9-201ENSMUST00000115659 Ccp110Q7TSH4 1004 aa18.62■□□□□ 0.57
Pcdha9-201ENSMUST00000115659 Mphosph10Q810V0 681 aaKnown RBP18.62■□□□□ 0.57
Pcdha9-201ENSMUST00000115659 Smc2Q8CG48 1191 aaKnown RBP18.61■□□□□ 0.57
Pcdha9-201ENSMUST00000115659 Fchsd2Q3USJ8 740 aa18.61■□□□□ 0.57
Pcdha9-201ENSMUST00000115659 PsapQ61207 557 aaKnown RBP18.61■□□□□ 0.57
Pcdha9-201ENSMUST00000115659 Apaf1O88879 1249 aa18.61■□□□□ 0.57
Pcdha9-201ENSMUST00000115659 Nop14Q8R3N1 860 aaKnown RBP18.61■□□□□ 0.57
Pcdha9-201ENSMUST00000115659 Q9D9S1 216 aa18.61■□□□□ 0.57
Pcdha9-201ENSMUST00000115659 Grin2bQ01097 1482 aa18.6■□□□□ 0.57
Pcdha9-201ENSMUST00000115659 Sptbn5F6UCX4 1208 aa18.6■□□□□ 0.57
Pcdha9-201ENSMUST00000115659 Rufy1Q8BIJ7 712 aa18.6■□□□□ 0.57
Pcdha9-201ENSMUST00000115659 Mns1Q61884 491 aa18.59■□□□□ 0.57
Pcdha9-201ENSMUST00000115659 Map3k5O35099 1380 aa18.59■□□□□ 0.57
Pcdha9-201ENSMUST00000115659 Lrrcc1Q69ZB0 1026 aa18.59■□□□□ 0.57
Pcdha9-201ENSMUST00000115659 Dhx9O70133 1380 aaKnown RBP18.58■□□□□ 0.57
Pcdha9-201ENSMUST00000115659 Nol12Q8BG17 217 aa18.58■□□□□ 0.56
Pcdha9-201ENSMUST00000115659 Dusp27Q148W8 1138 aa18.58■□□□□ 0.56
Pcdha9-201ENSMUST00000115659 Kif18aQ91WD7 886 aa18.58■□□□□ 0.56
Pcdha9-201ENSMUST00000115659 PogzQ8BZH4 1409 aaKnown RBP18.57■□□□□ 0.56
Pcdha9-201ENSMUST00000115659 Urb2E9Q7L1 1524 aaKnown RBP18.57■□□□□ 0.56
Pcdha9-201ENSMUST00000115659 Pnmal2G3X9N3 661 aa18.57■□□□□ 0.56
Pcdha9-201ENSMUST00000115659 Ccdc43Q9CR29 222 aaKnown RBP18.57■□□□□ 0.56
Pcdha9-201ENSMUST00000115659 Odf2lQ9D478 642 aa18.57■□□□□ 0.56
Pcdha9-201ENSMUST00000115659 Stk3Q9JI10 497 aa18.57■□□□□ 0.56
Pcdha9-201ENSMUST00000115659 Eif3aP23116 1344 aaKnown RBP18.56■□□□□ 0.56
Pcdha9-201ENSMUST00000115659 Dusp9Q7TNL7 452 aa18.56■□□□□ 0.56
Pcdha9-201ENSMUST00000115659 March6Q6ZQ89 909 aa18.55■□□□□ 0.56
Pcdha9-201ENSMUST00000115659 Cog6Q8R3I3 657 aa18.55■□□□□ 0.56
Pcdha9-201ENSMUST00000115659 TefQ9JLC6 301 aa18.54■□□□□ 0.56
Pcdha9-201ENSMUST00000115659 Rhot2Q8JZN7 620 aa18.54■□□□□ 0.56
Pcdha9-201ENSMUST00000115659 FosbP13346 338 aa18.54■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 47 ms