RNA–Protein interactions for RNA: ENSMUST00000098441.9

Col6a6-202, Transcript of Collagen alpha-6(VI) chain, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Col6a6, Length 8,781 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6-202ENSMUST00000098441 Ncbp3Q8BZR9 615 aaKnown RBP13.27□□□□□ -0.28
Col6a6-202ENSMUST00000098441 Cep89Q9CZX2 791 aa13.27□□□□□ -0.28
Col6a6-202ENSMUST00000098441 Sox12Q04890 314 aa13.27□□□□□ -0.29
Col6a6-202ENSMUST00000098441 Chmp7Q8R1T1 451 aa13.27□□□□□ -0.29
Col6a6-202ENSMUST00000098441 Zkscan1Q8BGS3 561 aaKnown RBP13.27□□□□□ -0.29
Col6a6-202ENSMUST00000098441 Ccdc183A2AJB1 534 aa13.27□□□□□ -0.29
Col6a6-202ENSMUST00000098441 Ankrd36D3Z4K0 1415 aa13.26□□□□□ -0.29
Col6a6-202ENSMUST00000098441 Usp48Q3V0C5 1052 aa13.26□□□□□ -0.29
Col6a6-202ENSMUST00000098441 Gnl3lQ6PGG6 577 aaKnown RBP13.26□□□□□ -0.29
Col6a6-202ENSMUST00000098441 Pank3Q8R2W9 370 aa13.26□□□□□ -0.29
Col6a6-202ENSMUST00000098441 Ccar2Q8VDP4 922 aaKnown RBP13.26□□□□□ -0.29
Col6a6-202ENSMUST00000098441 SkilQ60665 675 aa13.26□□□□□ -0.29
Col6a6-202ENSMUST00000098441 Cabp1Q9JLK7 227 aa13.26□□□□□ -0.29
Col6a6-202ENSMUST00000098441 Ccdc171E9Q1U1 1324 aa13.26□□□□□ -0.29
Col6a6-202ENSMUST00000098441 TxlnaQ6PAM1 554 aaKnown RBP13.26□□□□□ -0.29
Col6a6-202ENSMUST00000098441 Otud6bQ8K2H2 294 aa13.26□□□□□ -0.29
Col6a6-202ENSMUST00000098441 Rpap1Q80TE0 1409 aa13.26□□□□□ -0.29
Col6a6-202ENSMUST00000098441 PogkQ80TC5 607 aa13.25□□□□□ -0.29
Col6a6-202ENSMUST00000098441 Med4Q9CQA5 270 aa13.25□□□□□ -0.29
Col6a6-202ENSMUST00000098441 Kif20aP97329 887 aa13.25□□□□□ -0.29
Col6a6-202ENSMUST00000098441 Ddx46Q569Z5 1032 aaKnown RBP13.25□□□□□ -0.29
Col6a6-202ENSMUST00000098441 Gsdma3Q5Y4Y6 464 aa13.25□□□□□ -0.29
Col6a6-202ENSMUST00000098441 Pak3Q61036 559 aa13.25□□□□□ -0.29
Col6a6-202ENSMUST00000098441 ItpripQ3TNL8 555 aa13.25□□□□□ -0.29
Col6a6-202ENSMUST00000098441 Gnai1B2RSH2 354 aa13.24□□□□□ -0.29
Col6a6-202ENSMUST00000098441 Plcd4Q8K3R3 807 aa13.24□□□□□ -0.29
Col6a6-202ENSMUST00000098441 Gnai3Q9DC51 354 aa13.24□□□□□ -0.29
Col6a6-202ENSMUST00000098441 AknaQ80VW7 1404 aa13.24□□□□□ -0.29
Col6a6-202ENSMUST00000098441 Cabp4Q8VHC5 271 aa13.24□□□□□ -0.29
Col6a6-202ENSMUST00000098441 IncenpQ9WU62 880 aa13.24□□□□□ -0.29
Col6a6-202ENSMUST00000098441 Cavin1O54724 392 aa13.24□□□□□ -0.29
Col6a6-202ENSMUST00000098441 Rnf214Q8BFU3 668 aaKnown RBP13.24□□□□□ -0.29
Col6a6-202ENSMUST00000098441 Q8C5K5 320 aa13.23□□□□□ -0.29
Col6a6-202ENSMUST00000098441 KarsQ99MN1 595 aaKnown RBP13.23□□□□□ -0.29
Col6a6-202ENSMUST00000098441 Slc13a4Q8BZ82 625 aa13.23□□□□□ -0.29
Col6a6-202ENSMUST00000098441 Ppp1r18Q8BQ30 594 aa13.23□□□□□ -0.29
Col6a6-202ENSMUST00000098441 Ccnb3Q810T2 1396 aa13.23□□□□□ -0.29
Col6a6-202ENSMUST00000098441 NcapgE9PWG6 1004 aa13.23□□□□□ -0.29
Col6a6-202ENSMUST00000098441 Arhgef18Q6P9R4 1021 aa13.23□□□□□ -0.29
Col6a6-202ENSMUST00000098441 StambpQ9CQ26 424 aa13.23□□□□□ -0.29
Col6a6-202ENSMUST00000098441 WrnO09053 1401 aa13.23□□□□□ -0.29
Col6a6-202ENSMUST00000098441 PrkcshO08795 521 aa13.23□□□□□ -0.29
Col6a6-202ENSMUST00000098441 Ccdc181Q80ZU5 509 aa13.22□□□□□ -0.29
Col6a6-202ENSMUST00000098441 Neurod6P48986 337 aa13.22□□□□□ -0.29
Col6a6-202ENSMUST00000098441 Triml2E9PW10 424 aa13.22□□□□□ -0.29
Col6a6-202ENSMUST00000098441 Map3k7clP58500 142 aa13.22□□□□□ -0.29
Col6a6-202ENSMUST00000098441 CenpqQ9CPQ5 267 aa13.22□□□□□ -0.29
Col6a6-202ENSMUST00000098441 Fam184bQ0KK56 942 aa13.21□□□□□ -0.29
Col6a6-202ENSMUST00000098441 Cyp46a1Q9WVK8 500 aa13.21□□□□□ -0.29
Col6a6-202ENSMUST00000098441 Fan1Q69ZT1 1020 aa13.21□□□□□ -0.29
Col6a6-202ENSMUST00000098441 Odf2lQ9D478 642 aa13.21□□□□□ -0.29
Col6a6-202ENSMUST00000098441 Kdm5dQ62240 1548 aa13.21□□□□□ -0.29
Col6a6-202ENSMUST00000098441 Zkscan2G3X952 960 aa13.21□□□□□ -0.29
Col6a6-202ENSMUST00000098441 Dhx29Q6PGC1 1365 aaKnown RBP13.21□□□□□ -0.3
Col6a6-202ENSMUST00000098441 TnmdQ9EP64 317 aa13.21□□□□□ -0.3
Col6a6-202ENSMUST00000098441 Cux2P70298 1426 aa13.21□□□□□ -0.3
Col6a6-202ENSMUST00000098441 Utp14aQ640M1 767 aaKnown RBP13.21□□□□□ -0.3
Col6a6-202ENSMUST00000098441 Rbm28Q8CGC6 750 aaKnown RBP13.21□□□□□ -0.3
Col6a6-202ENSMUST00000098441 Fmnl2A2APV2 1086 aa13.2□□□□□ -0.3
Col6a6-202ENSMUST00000098441 Tmx4Q8C0L0 335 aa13.2□□□□□ -0.3
Col6a6-202ENSMUST00000098441 Dapk1Q80YE7 1442 aa13.2□□□□□ -0.3
Col6a6-202ENSMUST00000098441 Ric3Q8BPM6 367 aa13.2□□□□□ -0.3
Col6a6-202ENSMUST00000098441 Mipol1Q9D9F8 279 aa13.2□□□□□ -0.3
Col6a6-202ENSMUST00000098441 Ccdc102aQ3TMW1 549 aa13.2□□□□□ -0.3
Col6a6-202ENSMUST00000098441 CastP51125 788 aa13.19□□□□□ -0.3
Col6a6-202ENSMUST00000098441 Ppp2r3aB2RXC8 1150 aa13.19□□□□□ -0.3
Col6a6-202ENSMUST00000098441 Lrrfip1Q3UZ39 729 aaKnown RBP13.19□□□□□ -0.3
Col6a6-202ENSMUST00000098441 LarsQ8BMJ2 1178 aa13.19□□□□□ -0.3
Col6a6-202ENSMUST00000098441 Senp3Q9EP97 568 aaKnown RBP13.19□□□□□ -0.3
Col6a6-202ENSMUST00000098441 Cc2d1aQ8K1A6 943 aa13.19□□□□□ -0.3
Col6a6-202ENSMUST00000098441 Prl7d1P04769 244 aa13.19□□□□□ -0.3
Col6a6-202ENSMUST00000098441 Hmox1P14901 289 aa13.19□□□□□ -0.3
Col6a6-202ENSMUST00000098441 Gtf2f1Q3THK3 508 aaKnown RBP13.19□□□□□ -0.3
Col6a6-202ENSMUST00000098441 Stk38Q91VJ4 465 aa13.19□□□□□ -0.3
Col6a6-202ENSMUST00000098441 Larp1Q6ZQ58 1072 aaKnown RBP13.18□□□□□ -0.3
Col6a6-202ENSMUST00000098441 Trap1aP19473 224 aa13.18□□□□□ -0.3
Col6a6-202ENSMUST00000098441 Hdgfl1Q2VPR5 283 aa13.18□□□□□ -0.3
Col6a6-202ENSMUST00000098441 Erlin1Q91X78 346 aa13.18□□□□□ -0.3
Col6a6-202ENSMUST00000098441 Gcc1Q9D4H2 778 aa13.18□□□□□ -0.3
Col6a6-202ENSMUST00000098441 Abcd1P48410 736 aa13.18□□□□□ -0.3
Col6a6-202ENSMUST00000098441 Cdkl5Q3UTQ8 938 aa13.18□□□□□ -0.3
Col6a6-202ENSMUST00000098441 Erc1Q99MI1 1120 aa13.18□□□□□ -0.3
Col6a6-202ENSMUST00000098441 Ccdc30Q8BVF4 654 aa13.17□□□□□ -0.3
Col6a6-202ENSMUST00000098441 PnisrA2AJT4 805 aaKnown RBP13.17□□□□□ -0.3
Col6a6-202ENSMUST00000098441 Cfap45Q9D9U9 551 aa13.17□□□□□ -0.3
Col6a6-202ENSMUST00000098441 TimelessQ9R1X4 1197 aa13.17□□□□□ -0.3
Col6a6-202ENSMUST00000098441 Kif3bQ61771 747 aa13.17□□□□□ -0.3
Col6a6-202ENSMUST00000098441 Sv2bQ8BG39 683 aa13.17□□□□□ -0.3
Col6a6-202ENSMUST00000098441 Tango6Q8C3S2 1079 aa13.17□□□□□ -0.3
Col6a6-202ENSMUST00000098441 CenphQ9QYM8 241 aa13.17□□□□□ -0.3
Col6a6-202ENSMUST00000098441 Ccdc191J3QQ27 883 aa13.17□□□□□ -0.3
Col6a6-202ENSMUST00000098441 Cfap53Q9D439 514 aa13.17□□□□□ -0.3
Col6a6-202ENSMUST00000098441 Trim30cD3YVI9 513 aa13.17□□□□□ -0.3
Col6a6-202ENSMUST00000098441 Rnf187Q8BFX1 236 aa13.17□□□□□ -0.3
Col6a6-202ENSMUST00000098441 Q9D9S1 216 aa13.16□□□□□ -0.3
Col6a6-202ENSMUST00000098441 Pmfbp1Q9WVQ0 1022 aa13.16□□□□□ -0.3
Col6a6-202ENSMUST00000098441 Krt85Q9Z2T6 507 aa13.16□□□□□ -0.3
Col6a6-202ENSMUST00000098441 Pafah1b1P63005 410 aaKnown RBP13.16□□□□□ -0.3
Col6a6-202ENSMUST00000098441 Gtf3c5Q8R2T8 520 aa13.16□□□□□ -0.3
Col6a6-202ENSMUST00000098441 Cttnbp2B9EJA2 1648 aa13.16□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 16 ms