RNA–Protein interactions for RNA: ENSMUST00000073691.3

Lima1-201, Transcript of LIM domain and actin-binding protein 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lima1, Length 4,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1-201ENSMUST00000073691 Cabp2Q9JLK4 216 aa13.53□□□□□ -0.24
Lima1-201ENSMUST00000073691 Caskin1Q6P9K8 1431 aa13.52□□□□□ -0.24
Lima1-201ENSMUST00000073691 Prex2Q3LAC4 1598 aa13.52□□□□□ -0.24
Lima1-201ENSMUST00000073691 Cdk13Q69ZA1 1511 aaKnown RBP13.52□□□□□ -0.24
Lima1-201ENSMUST00000073691 PalmQ9Z0P4 383 aa13.52□□□□□ -0.24
Lima1-201ENSMUST00000073691 Lmo7E9PYF4 1699 aaKnown RBP13.52□□□□□ -0.25
Lima1-201ENSMUST00000073691 Lmtk2Q3TYD6 1471 aa13.52□□□□□ -0.25
Lima1-201ENSMUST00000073691 PtmsQ9D0J8 101 aaKnown RBP13.52□□□□□ -0.25
Lima1-201ENSMUST00000073691 CatipB9EKE5 520 aa13.51□□□□□ -0.25
Lima1-201ENSMUST00000073691 Ciz1Q8VEH2 845 aa13.51□□□□□ -0.25
Lima1-201ENSMUST00000073691 Clstn1Q9EPL2 979 aa13.51□□□□□ -0.25
Lima1-201ENSMUST00000073691 Erbb3Q61526 1339 aa13.51□□□□□ -0.25
Lima1-201ENSMUST00000073691 Iffo2Q8R2V2 512 aa13.51□□□□□ -0.25
Lima1-201ENSMUST00000073691 Nol12Q8BG17 217 aa13.51□□□□□ -0.25
Lima1-201ENSMUST00000073691 Rapgef6Q5NCJ1 1609 aa13.51□□□□□ -0.25
Lima1-201ENSMUST00000073691 CrebrfQ8CDG5 640 aaKnown RBP13.5□□□□□ -0.25
Lima1-201ENSMUST00000073691 RalgapbQ8BQZ4 1484 aa13.5□□□□□ -0.25
Lima1-201ENSMUST00000073691 Sptbn5F6UCX4 1208 aa13.5□□□□□ -0.25
Lima1-201ENSMUST00000073691 Shroom2A2ALU4 1481 aa13.5□□□□□ -0.25
Lima1-201ENSMUST00000073691 FanciQ8K368 1330 aa13.49□□□□□ -0.25
Lima1-201ENSMUST00000073691 Ssh2Q5SW75 1423 aa13.49□□□□□ -0.25
Lima1-201ENSMUST00000073691 Filip1lQ6P6L0 1131 aa13.49□□□□□ -0.25
Lima1-201ENSMUST00000073691 AampJ3QN89 436 aa13.48□□□□□ -0.25
Lima1-201ENSMUST00000073691 Naip6Q9JIB6 1403 aa13.48□□□□□ -0.25
Lima1-201ENSMUST00000073691 Gas2l2Q5SSG4 860 aa13.48□□□□□ -0.25
Lima1-201ENSMUST00000073691 Cetn4Q8K4K1 168 aa13.48□□□□□ -0.25
Lima1-201ENSMUST00000073691 Ccdc171E9Q1U1 1324 aa13.48□□□□□ -0.25
Lima1-201ENSMUST00000073691 Rsph4aQ8BYM7 716 aa13.47□□□□□ -0.25
Lima1-201ENSMUST00000073691 Magi3Q9EQJ9 1476 aa13.47□□□□□ -0.25
Lima1-201ENSMUST00000073691 Peg3Q3URU2 1571 aa13.47□□□□□ -0.25
Lima1-201ENSMUST00000073691 Rrp12Q6P5B0 1295 aaKnown RBP13.47□□□□□ -0.25
Lima1-201ENSMUST00000073691 Tfip11Q9ERA6 838 aaKnown RBP13.47□□□□□ -0.25
Lima1-201ENSMUST00000073691 Kdm3bQ6ZPY7 1562 aa13.47□□□□□ -0.25
Lima1-201ENSMUST00000073691 Atp10dQ8K2X1 1416 aa13.47□□□□□ -0.25
Lima1-201ENSMUST00000073691 Bcl2l13P59017 434 aa13.47□□□□□ -0.25
Lima1-201ENSMUST00000073691 Ggnbp2Q5SV77 696 aa13.47□□□□□ -0.25
Lima1-201ENSMUST00000073691 Sv2bQ8BG39 683 aa13.47□□□□□ -0.25
Lima1-201ENSMUST00000073691 Hmox1P14901 289 aa13.46□□□□□ -0.25
Lima1-201ENSMUST00000073691 Adcy10Q8C0T9 1614 aa13.46□□□□□ -0.25
Lima1-201ENSMUST00000073691 Zmym4A2A791 1549 aaKnown RBP13.46□□□□□ -0.25
Lima1-201ENSMUST00000073691 Uspl1Q3ULM6 1089 aa13.46□□□□□ -0.25
Lima1-201ENSMUST00000073691 Arhgef12Q8R4H2 1543 aaKnown RBP13.46□□□□□ -0.26
Lima1-201ENSMUST00000073691 Gpatch11Q3UFS4 262 aa13.45□□□□□ -0.26
Lima1-201ENSMUST00000073691 Ssh1Q76I79 1042 aa13.45□□□□□ -0.26
Lima1-201ENSMUST00000073691 Cdc37l1Q9CZP7 335 aa13.45□□□□□ -0.26
Lima1-201ENSMUST00000073691 DroshaQ5HZJ0 1373 aaKnown RBP13.45□□□□□ -0.26
Lima1-201ENSMUST00000073691 Map4k4P97820 1233 aaKnown RBP13.45□□□□□ -0.26
Lima1-201ENSMUST00000073691 PogkQ80TC5 607 aa13.45□□□□□ -0.26
Lima1-201ENSMUST00000073691 Fancd2Q80V62 1450 aa13.45□□□□□ -0.26
Lima1-201ENSMUST00000073691 St18Q80TY4 1045 aa13.45□□□□□ -0.26
Lima1-201ENSMUST00000073691 Rnf214Q8BFU3 668 aaKnown RBP13.44□□□□□ -0.26
Lima1-201ENSMUST00000073691 Chmp3Q9CQ10 224 aa13.44□□□□□ -0.26
Lima1-201ENSMUST00000073691 Atp6v1dP57746 247 aa13.44□□□□□ -0.26
Lima1-201ENSMUST00000073691 4933402E13RikQ9D4D2 429 aa13.44□□□□□ -0.26
Lima1-201ENSMUST00000073691 AI481877A2ALV5 1481 aa13.43□□□□□ -0.26
Lima1-201ENSMUST00000073691 Slc12a5Q91V14 1138 aa13.43□□□□□ -0.26
Lima1-201ENSMUST00000073691 Cfdp1O88271 295 aaKnown RBP13.43□□□□□ -0.26
Lima1-201ENSMUST00000073691 Cyp46a1Q9WVK8 500 aa13.43□□□□□ -0.26
Lima1-201ENSMUST00000073691 Larp1bA0A0A6YXJ7 370 aaKnown RBP13.42□□□□□ -0.26
Lima1-201ENSMUST00000073691 Duxf3A0A0N4SV92 674 aa13.42□□□□□ -0.26
Lima1-201ENSMUST00000073691 Ppp1r9bQ6R891 817 aaKnown RBP13.42□□□□□ -0.26
Lima1-201ENSMUST00000073691 Smarce1O54941 411 aaKnown RBP13.42□□□□□ -0.26
Lima1-201ENSMUST00000073691 Ddrgk1Q80WW9 315 aa13.42□□□□□ -0.26
Lima1-201ENSMUST00000073691 Slc52a2Q9D8F3 450 aa13.42□□□□□ -0.26
Lima1-201ENSMUST00000073691 Mapkbp1Q6NS57 1503 aa13.42□□□□□ -0.26
Lima1-201ENSMUST00000073691 MlecQ6ZQI3 291 aaKnown RBP13.41□□□□□ -0.26
Lima1-201ENSMUST00000073691 Kif21aQ9QXL2 1672 aa13.41□□□□□ -0.26
Lima1-201ENSMUST00000073691 Aplp1Q03157 653 aa13.41□□□□□ -0.26
Lima1-201ENSMUST00000073691 Mcm10Q0VBD2 885 aa13.41□□□□□ -0.26
Lima1-201ENSMUST00000073691 Plekhm2Q80TQ5 1018 aa13.41□□□□□ -0.26
Lima1-201ENSMUST00000073691 Stk3Q9JI10 497 aa13.41□□□□□ -0.26
Lima1-201ENSMUST00000073691 HnrnpmQ9D0E1 729 aaKnown RBP13.4□□□□□ -0.26
Lima1-201ENSMUST00000073691 CarsQ9ER72 831 aaKnown RBP13.4□□□□□ -0.26
Lima1-201ENSMUST00000073691 VgfQ0VGU4 617 aa13.4□□□□□ -0.26
Lima1-201ENSMUST00000073691 Tceal9Q9DD24 104 aa13.4□□□□□ -0.26
Lima1-201ENSMUST00000073691 Cpsf1Q9EPU4 1441 aaKnown RBP13.4□□□□□ -0.27
Lima1-201ENSMUST00000073691 Pde3bQ61409 1100 aa13.39□□□□□ -0.27
Lima1-201ENSMUST00000073691 Q3UPC7 1272 aa13.39□□□□□ -0.27
Lima1-201ENSMUST00000073691 Polr3gQ6NXY9 223 aa13.39□□□□□ -0.27
Lima1-201ENSMUST00000073691 Smarca5Q91ZW3 1051 aaKnown RBP13.39□□□□□ -0.27
Lima1-201ENSMUST00000073691 PnnO35691 725 aaKnown RBP13.38□□□□□ -0.27
Lima1-201ENSMUST00000073691 MsnP26041 577 aaKnown RBP13.38□□□□□ -0.27
Lima1-201ENSMUST00000073691 Igf1rQ60751 1373 aa13.38□□□□□ -0.27
Lima1-201ENSMUST00000073691 AppP12023 770 aa13.37□□□□□ -0.27
Lima1-201ENSMUST00000073691 Babam1Q3UI43 333 aa13.37□□□□□ -0.27
Lima1-201ENSMUST00000073691 Q4VA45 678 aa13.37□□□□□ -0.27
Lima1-201ENSMUST00000073691 Rab11fip3Q8CHD8 1047 aa13.37□□□□□ -0.27
Lima1-201ENSMUST00000073691 Sf3a1Q8K4Z5 791 aaKnown RBP13.37□□□□□ -0.27
Lima1-201ENSMUST00000073691 MvpQ9EQK5 861 aa13.37□□□□□ -0.27
Lima1-201ENSMUST00000073691 Becn1O88597 448 aa13.37□□□□□ -0.27
Lima1-201ENSMUST00000073691 Znf692Q3U381 531 aa13.37□□□□□ -0.27
Lima1-201ENSMUST00000073691 AlkP97793 1621 aa13.37□□□□□ -0.27
Lima1-201ENSMUST00000073691 Aldh1l1Q8R0Y6 902 aa13.37□□□□□ -0.27
Lima1-201ENSMUST00000073691 Utp3Q9JI13 469 aaKnown RBP13.36□□□□□ -0.27
Lima1-201ENSMUST00000073691 Gripap1Q8VD04 806 aa13.36□□□□□ -0.27
Lima1-201ENSMUST00000073691 Ush1cQ9ES64 910 aa13.36□□□□□ -0.27
Lima1-201ENSMUST00000073691 CastP51125 788 aa13.36□□□□□ -0.27
Lima1-201ENSMUST00000073691 Anapc15P60007 132 aa13.36□□□□□ -0.27
Lima1-201ENSMUST00000073691 Cwc27Q3TKY6 469 aa13.36□□□□□ -0.27
Lima1-201ENSMUST00000073691 Znf326O88291 580 aa13.35□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 30.4 ms