RNA–Protein interactions for RNA: ENSMUST00000068378.5

Cntn1-202, Transcript of Contactin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cntn1, Length 3,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1-202ENSMUST00000068378 Ift140E9PY46 1464 aa8.98□□□□□ -0.97
Cntn1-202ENSMUST00000068378 Shroom2A2ALU4 1481 aa8.97□□□□□ -0.97
Cntn1-202ENSMUST00000068378 Ppp1r9bQ6R891 817 aaKnown RBP8.97□□□□□ -0.97
Cntn1-202ENSMUST00000068378 Nfatc2ipO09130 412 aa8.97□□□□□ -0.97
Cntn1-202ENSMUST00000068378 RbsnQ80Y56 783 aa8.97□□□□□ -0.97
Cntn1-202ENSMUST00000068378 Znf771Q8BJ90 317 aa8.97□□□□□ -0.97
Cntn1-202ENSMUST00000068378 Irx5Q9JKQ4 484 aa8.97□□□□□ -0.97
Cntn1-202ENSMUST00000068378 Q7TT23 1179 aa8.97□□□□□ -0.97
Cntn1-202ENSMUST00000068378 Ccdc88bQ4QRL3 1481 aa8.96□□□□□ -0.97
Cntn1-202ENSMUST00000068378 Pcmtd1P59913 357 aa8.96□□□□□ -0.97
Cntn1-202ENSMUST00000068378 Ice2Q3UZ18 988 aaKnown RBP8.96□□□□□ -0.97
Cntn1-202ENSMUST00000068378 Rps6ka5Q8C050 863 aa8.96□□□□□ -0.97
Cntn1-202ENSMUST00000068378 Ush1cQ9ES64 910 aa8.96□□□□□ -0.97
Cntn1-202ENSMUST00000068378 Hsp90ab1P11499 724 aaKnown RBP8.96□□□□□ -0.98
Cntn1-202ENSMUST00000068378 Prkrip1Q9CWV6 186 aaKnown RBP8.96□□□□□ -0.98
Cntn1-202ENSMUST00000068378 Duox2A2AQ99 1517 aa8.95□□□□□ -0.98
Cntn1-202ENSMUST00000068378 Ankrd13aQ80UP5 588 aa8.95□□□□□ -0.98
Cntn1-202ENSMUST00000068378 PnisrA2AJT4 805 aaKnown RBP8.95□□□□□ -0.98
Cntn1-202ENSMUST00000068378 U2af2P26369 475 aaKnown RBP8.94□□□□□ -0.98
Cntn1-202ENSMUST00000068378 Rnf25Q9QZR0 456 aa8.94□□□□□ -0.98
Cntn1-202ENSMUST00000068378 Cep126Q0VBV7 1103 aa8.94□□□□□ -0.98
Cntn1-202ENSMUST00000068378 Mctp2Q5RJH2 878 aa8.94□□□□□ -0.98
Cntn1-202ENSMUST00000068378 Grin2bQ01097 1482 aa8.94□□□□□ -0.98
Cntn1-202ENSMUST00000068378 Trim30dE9PWL0 497 aa8.94□□□□□ -0.98
Cntn1-202ENSMUST00000068378 Kdm5bQ80Y84 1544 aa8.93□□□□□ -0.98
Cntn1-202ENSMUST00000068378 PtmsQ9D0J8 101 aaKnown RBP8.93□□□□□ -0.98
Cntn1-202ENSMUST00000068378 Rusc2Q80U22 1514 aa8.93□□□□□ -0.98
Cntn1-202ENSMUST00000068378 Anapc15-psA0A140T8L6 141 aa8.92□□□□□ -0.98
Cntn1-202ENSMUST00000068378 MsnP26041 577 aaKnown RBP8.92□□□□□ -0.98
Cntn1-202ENSMUST00000068378 Ssr1Q9CY50 286 aaKnown RBP8.92□□□□□ -0.98
Cntn1-202ENSMUST00000068378 Flt3Q00342 1000 aa8.92□□□□□ -0.98
Cntn1-202ENSMUST00000068378 Dixdc1Q80Y83 711 aa8.92□□□□□ -0.98
Cntn1-202ENSMUST00000068378 Trim66Q924W6 1242 aa8.92□□□□□ -0.98
Cntn1-202ENSMUST00000068378 Hspa5P20029 655 aaKnown RBP8.91□□□□□ -0.98
Cntn1-202ENSMUST00000068378 Ccdc102aQ3TMW1 549 aa8.91□□□□□ -0.98
Cntn1-202ENSMUST00000068378 Mak16Q8BGS0 296 aaKnown RBP8.91□□□□□ -0.98
Cntn1-202ENSMUST00000068378 Mink1Q9JM52 1308 aa8.91□□□□□ -0.98
Cntn1-202ENSMUST00000068378 Plcb2A3KGF7 1181 aa8.91□□□□□ -0.98
Cntn1-202ENSMUST00000068378 Pabpn1Q8CCS6 302 aaKnown RBP8.91□□□□□ -0.98
Cntn1-202ENSMUST00000068378 Npm3Q9CPP0 175 aaKnown RBP8.91□□□□□ -0.98
Cntn1-202ENSMUST00000068378 Chmp5Q9D7S9 219 aa8.91□□□□□ -0.98
Cntn1-202ENSMUST00000068378 Wdr78E9PYY5 807 aa8.9□□□□□ -0.98
Cntn1-202ENSMUST00000068378 Serpina10Q8R121 448 aa8.9□□□□□ -0.98
Cntn1-202ENSMUST00000068378 Kif27Q7M6Z4 1394 aa8.9□□□□□ -0.98
Cntn1-202ENSMUST00000068378 Becn1O88597 448 aa8.9□□□□□ -0.98
Cntn1-202ENSMUST00000068378 Tor1aip2Q8BYU6 502 aa8.9□□□□□ -0.98
Cntn1-202ENSMUST00000068378 Ppm1fQ8CGA0 452 aa8.9□□□□□ -0.98
Cntn1-202ENSMUST00000068378 Calr3Q9D9Q6 380 aa8.9□□□□□ -0.98
Cntn1-202ENSMUST00000068378 Repin1Q5U4E2 545 aa8.9□□□□□ -0.99
Cntn1-202ENSMUST00000068378 Tnpo1Q8BFY9 898 aaKnown RBP8.9□□□□□ -0.99
Cntn1-202ENSMUST00000068378 Efcab5A0JP43 1406 aa8.9□□□□□ -0.99
Cntn1-202ENSMUST00000068378 Gm10354K7N6A0 256 aa8.89□□□□□ -0.99
Cntn1-202ENSMUST00000068378 Pdcl2Q78Y63 240 aa8.89□□□□□ -0.99
Cntn1-202ENSMUST00000068378 Disp1Q3TDN0 1521 aa8.89□□□□□ -0.99
Cntn1-202ENSMUST00000068378 Zc3h4Q6ZPZ3 1304 aaKnown RBP8.89□□□□□ -0.99
Cntn1-202ENSMUST00000068378 Skor2A7M7C7 1008 aa8.89□□□□□ -0.99
Cntn1-202ENSMUST00000068378 Snd1Q78PY7 910 aaKnown RBP8.89□□□□□ -0.99
Cntn1-202ENSMUST00000068378 Ipo8Q7TMY7 1010 aa8.88□□□□□ -0.99
Cntn1-202ENSMUST00000068378 Rbm42Q91V81 474 aaKnown RBP8.88□□□□□ -0.99
Cntn1-202ENSMUST00000068378 Sugp2Q8CH09 1067 aa8.88□□□□□ -0.99
Cntn1-202ENSMUST00000068378 Lcmt1A0A0U1RNF2 332 aa8.87□□□□□ -0.99
Cntn1-202ENSMUST00000068378 Cc2d2bA0A286YDU8 1405 aa8.87□□□□□ -0.99
Cntn1-202ENSMUST00000068378 Arid3cA6PWV5 409 aa8.86□□□□□ -0.99
Cntn1-202ENSMUST00000068378 Grpel1Q99LP6 217 aa8.86□□□□□ -0.99
Cntn1-202ENSMUST00000068378 Gipc2Q9Z2H7 314 aa8.86□□□□□ -0.99
Cntn1-202ENSMUST00000068378 Pbrm1Q8BSQ9 1634 aaKnown RBP8.86□□□□□ -0.99
Cntn1-202ENSMUST00000068378 NcapgE9PWG6 1004 aa8.86□□□□□ -0.99
Cntn1-202ENSMUST00000068378 Ddit3P35639 168 aa8.86□□□□□ -0.99
Cntn1-202ENSMUST00000068378 Znf526Q8BI66 675 aa8.86□□□□□ -0.99
Cntn1-202ENSMUST00000068378 SnrkQ8VDU5 748 aa8.86□□□□□ -0.99
Cntn1-202ENSMUST00000068378 Samd9lQ69Z37 1561 aa8.86□□□□□ -0.99
Cntn1-202ENSMUST00000068378 Nup160Q9Z0W3 1402 aaKnown RBP8.86□□□□□ -0.99
Cntn1-202ENSMUST00000068378 Catsper2A2ARP9 588 aa8.86□□□□□ -0.99
Cntn1-202ENSMUST00000068378 AdnpQ9Z103 1108 aaKnown RBP8.86□□□□□ -0.99
Cntn1-202ENSMUST00000068378 Ralbp1Q62172 648 aa8.85□□□□□ -0.99
Cntn1-202ENSMUST00000068378 Trerf1Q8BXJ2 1205 aa8.85□□□□□ -0.99
Cntn1-202ENSMUST00000068378 Top2aQ01320 1528 aaKnown RBP8.85□□□□□ -0.99
Cntn1-202ENSMUST00000068378 EprsQ8CGC7 1512 aaKnown RBP8.85□□□□□ -0.99
Cntn1-202ENSMUST00000068378 MafgO54790 162 aa8.85□□□□□ -0.99
Cntn1-202ENSMUST00000068378 Rfx1P48377 963 aa8.85□□□□□ -0.99
Cntn1-202ENSMUST00000068378 NrkQ9R0G8 1455 aa8.85□□□□□ -0.99
Cntn1-202ENSMUST00000068378 Atp2b1G5E829 1220 aa8.85□□□□□ -0.99
Cntn1-202ENSMUST00000068378 Tmco5bQ80X59 307 aa8.85□□□□□ -0.99
Cntn1-202ENSMUST00000068378 Swt1Q9DBQ9 907 aa8.85□□□□□ -0.99
Cntn1-202ENSMUST00000068378 Col17a1Q07563 1470 aa8.84□□□□□ -0.99
Cntn1-202ENSMUST00000068378 Ca8P28651 291 aa8.84□□□□□ -0.99
Cntn1-202ENSMUST00000068378 Lrriq3Q14DL3 633 aa8.84□□□□□ -0.99
Cntn1-202ENSMUST00000068378 NmiO35309 314 aa8.84□□□□□ -0.99
Cntn1-202ENSMUST00000068378 Plekhg5Q66T02 1073 aa8.84□□□□□ -0.99
Cntn1-202ENSMUST00000068378 Pnma2Q8BHK0 365 aa8.84□□□□□ -0.99
Cntn1-202ENSMUST00000068378 Frmd4bQ920B0 1035 aa8.84□□□□□ -0.99
Cntn1-202ENSMUST00000068378 Kdm2bQ6P1G2 1309 aa8.84□□□□□ -0.99
Cntn1-202ENSMUST00000068378 Ncoa2Q61026 1462 aa8.84□□□□□ -0.99
Cntn1-202ENSMUST00000068378 Slc20a2Q80UP8 656 aa8.84□□□□□ -0.99
Cntn1-202ENSMUST00000068378 Tmc1Q8R4P5 757 aa8.84□□□□□ -0.99
Cntn1-202ENSMUST00000068378 CntlnA2AM05 1397 aa8.83□□□□□ -1
Cntn1-202ENSMUST00000068378 Tnnt1O88346 262 aa8.83□□□□□ -1
Cntn1-202ENSMUST00000068378 TnikP83510 1323 aa8.83□□□□□ -1
Cntn1-202ENSMUST00000068378 Kank1E9Q238 1360 aa8.83□□□□□ -1
Cntn1-202ENSMUST00000068378 Map7d2A2AG50 781 aa8.83□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 58.8 ms