RNA–Protein interactions for RNA: ENSMUST00000060896.4

Col6a6-201, Transcript of Collagen alpha-6(VI) chain, mousemouse

TSL 1 (best) BASIC

Gene Col6a6, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6-201ENSMUST00000060896 PalmQ9Z0P4 383 aa8.73□□□□□ -1.01
Col6a6-201ENSMUST00000060896 Gcc2Q8CHG3 1679 aa8.73□□□□□ -1.01
Col6a6-201ENSMUST00000060896 Mcm10Q0VBD2 885 aa8.73□□□□□ -1.01
Col6a6-201ENSMUST00000060896 Map7O88735 730 aa8.73□□□□□ -1.01
Col6a6-201ENSMUST00000060896 Erbb3Q61526 1339 aa8.73□□□□□ -1.01
Col6a6-201ENSMUST00000060896 OvosQ3UU35 1456 aa8.73□□□□□ -1.01
Col6a6-201ENSMUST00000060896 Triml2E9PW10 424 aa8.72□□□□□ -1.01
Col6a6-201ENSMUST00000060896 Plcd4Q8K3R3 807 aa8.72□□□□□ -1.01
Col6a6-201ENSMUST00000060896 Hsp90b1P08113 802 aaKnown RBP8.72□□□□□ -1.01
Col6a6-201ENSMUST00000060896 PtprgQ05909 1442 aa8.72□□□□□ -1.01
Col6a6-201ENSMUST00000060896 Stk11ipQ3TAA7 1072 aa8.71□□□□□ -1.01
Col6a6-201ENSMUST00000060896 Chd1P40201 1711 aa8.71□□□□□ -1.01
Col6a6-201ENSMUST00000060896 Chmp4cQ9D7F7 232 aa8.71□□□□□ -1.01
Col6a6-201ENSMUST00000060896 Lrrc9Q8CDN9 1456 aa8.71□□□□□ -1.01
Col6a6-201ENSMUST00000060896 Larp1bA0A0A6YXJ7 370 aaKnown RBP8.71□□□□□ -1.02
Col6a6-201ENSMUST00000060896 Aplp1Q03157 653 aa8.7□□□□□ -1.02
Col6a6-201ENSMUST00000060896 Swt1Q9DBQ9 907 aa8.7□□□□□ -1.02
Col6a6-201ENSMUST00000060896 Bcl2l13P59017 434 aa8.7□□□□□ -1.02
Col6a6-201ENSMUST00000060896 Ggnbp2Q5SV77 696 aa8.7□□□□□ -1.02
Col6a6-201ENSMUST00000060896 Slc12a5Q91V14 1138 aa8.7□□□□□ -1.02
Col6a6-201ENSMUST00000060896 Ptch1Q61115 1434 aa8.7□□□□□ -1.02
Col6a6-201ENSMUST00000060896 KnstrnQ9D9Z1 312 aaKnown RBP8.7□□□□□ -1.02
Col6a6-201ENSMUST00000060896 Rsph4aQ8BYM7 716 aa8.69□□□□□ -1.02
Col6a6-201ENSMUST00000060896 Kiaa1551Q5DTW7 1521 aa8.69□□□□□ -1.02
Col6a6-201ENSMUST00000060896 Cavin4A2AMM0 362 aa8.69□□□□□ -1.02
Col6a6-201ENSMUST00000060896 Rfx1P48377 963 aa8.69□□□□□ -1.02
Col6a6-201ENSMUST00000060896 Kiaa1210E9Q0C6 1637 aa8.69□□□□□ -1.02
Col6a6-201ENSMUST00000060896 Cpsf1Q9EPU4 1441 aaKnown RBP8.69□□□□□ -1.02
Col6a6-201ENSMUST00000060896 Ccdc183A2AJB1 534 aa8.69□□□□□ -1.02
Col6a6-201ENSMUST00000060896 Gtf3c5Q8R2T8 520 aa8.69□□□□□ -1.02
Col6a6-201ENSMUST00000060896 Setbp1Q9Z180 1582 aa8.69□□□□□ -1.02
Col6a6-201ENSMUST00000060896 Clasp1Q80TV8 1535 aaKnown RBP8.68□□□□□ -1.02
Col6a6-201ENSMUST00000060896 Gtf3c3Q3TMP1 882 aa8.68□□□□□ -1.02
Col6a6-201ENSMUST00000060896 Ric3Q8BPM6 367 aa8.68□□□□□ -1.02
Col6a6-201ENSMUST00000060896 Slc52a2Q9D8F3 450 aa8.68□□□□□ -1.02
Col6a6-201ENSMUST00000060896 Mroh2aD3Z750 1679 aa8.68□□□□□ -1.02
Col6a6-201ENSMUST00000060896 FanciQ8K368 1330 aa8.68□□□□□ -1.02
Col6a6-201ENSMUST00000060896 Edc4Q3UJB9 1406 aaKnown RBP8.68□□□□□ -1.02
Col6a6-201ENSMUST00000060896 Kank1E9Q238 1360 aa8.67□□□□□ -1.02
Col6a6-201ENSMUST00000060896 Abcc6Q9R1S7 1498 aa8.67□□□□□ -1.02
Col6a6-201ENSMUST00000060896 AatkQ80YE4 1365 aa8.67□□□□□ -1.02
Col6a6-201ENSMUST00000060896 Htatsf1Q8BGC0 757 aa8.67□□□□□ -1.02
Col6a6-201ENSMUST00000060896 Adgrl2Q8JZZ7 1487 aa8.67□□□□□ -1.02
Col6a6-201ENSMUST00000060896 Kif14L0N7N1 1674 aaKnown RBP8.67□□□□□ -1.02
Col6a6-201ENSMUST00000060896 Cul7Q8VE73 1689 aa8.67□□□□□ -1.02
Col6a6-201ENSMUST00000060896 Maco1Q7TQE6 664 aaKnown RBP8.66□□□□□ -1.02
Col6a6-201ENSMUST00000060896 Pip4k2bQ80XI4 416 aa8.66□□□□□ -1.02
Col6a6-201ENSMUST00000060896 DroshaQ5HZJ0 1373 aaKnown RBP8.66□□□□□ -1.02
Col6a6-201ENSMUST00000060896 Klhdc4Q921I2 584 aa8.66□□□□□ -1.02
Col6a6-201ENSMUST00000060896 BccipQ9CWI3 316 aa8.66□□□□□ -1.02
Col6a6-201ENSMUST00000060896 Uspl1Q3ULM6 1089 aa8.66□□□□□ -1.02
Col6a6-201ENSMUST00000060896 Slc4a10Q5DTL9 1118 aa8.66□□□□□ -1.02
Col6a6-201ENSMUST00000060896 Tarbp1E9Q368 1579 aa8.65□□□□□ -1.02
Col6a6-201ENSMUST00000060896 Supt6hQ62383 1726 aaKnown RBP8.65□□□□□ -1.02
Col6a6-201ENSMUST00000060896 HnrnpuQ8VEK3 800 aaKnown RBP8.65□□□□□ -1.03
Col6a6-201ENSMUST00000060896 NinlQ6ZQ12 1394 aa8.65□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Gnai1B2RSH2 354 aa8.64□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Gnai3Q9DC51 354 aa8.64□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Ythdc1E9Q5K9 736 aaKnown RBP8.64□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Chmp4bQ9D8B3 224 aaKnown RBP8.64□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Fyb1O35601 819 aa8.64□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Cdc37l1Q9CZP7 335 aa8.64□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Zfyve16Q80U44 1528 aa8.64□□□□□ -1.03
Col6a6-201ENSMUST00000060896 AU022751B1B0V2 589 aa8.63□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Irx3P81067 507 aa8.63□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Cog6Q8R3I3 657 aa8.63□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Fam208aQ69ZR9 1610 aaKnown RBP8.63□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Ppp1r3fQ9JIG4 799 aa8.63□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Evi5lH3BKQ3 813 aa8.63□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Zmym4A2A791 1549 aaKnown RBP8.63□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Q4VA45 678 aa8.63□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Tnpo1Q8BFY9 898 aaKnown RBP8.63□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Nek4Q9Z1J2 792 aa8.63□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Brpf1B2RRD7 1212 aa8.62□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Eif4g2Q62448 906 aaKnown RBP8.62□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Fmn2Q9JL04 1578 aa8.62□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Q3UJC8 639 aa8.62□□□□□ -1.03
Col6a6-201ENSMUST00000060896 TatQ8QZR1 454 aa8.62□□□□□ -1.03
Col6a6-201ENSMUST00000060896 NhsB1AV60 1647 aa8.61□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Egfem1Q8C088 590 aa8.61□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Cdc42bpaQ3UU96 1719 aa8.61□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Map4k4P97820 1233 aaKnown RBP8.61□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Smc5Q8CG46 1101 aaKnown RBP8.61□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Ak9G3UYQ4 1894 aa8.61□□□□□ -1.03
Col6a6-201ENSMUST00000060896 AdgbG3UZ78 1657 aa8.61□□□□□ -1.03
Col6a6-201ENSMUST00000060896 TmpoQ61033 693 aaKnown RBP8.61□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Dennd6aQ8BH65 605 aa8.61□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Q9D2X8 372 aa8.61□□□□□ -1.03
Col6a6-201ENSMUST00000060896 TnikP83510 1323 aa8.61□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Duxf3A0A0N4SV92 674 aa8.6□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Ppp2r3aB2RXC8 1150 aa8.6□□□□□ -1.03
Col6a6-201ENSMUST00000060896 PtmaP26350 111 aa8.6□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Fkbp4P30416 458 aa8.6□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Sv2bQ8BG39 683 aa8.6□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Pprc1Q6NZN1 1644 aa8.6□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Plekhm2Q80TQ5 1018 aa8.6□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Znf518aB2RRF6 1478 aaKnown RBP8.6□□□□□ -1.03
Col6a6-201ENSMUST00000060896 AglF8VPN4 1532 aa8.6□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Gm10471E9Q1C7 252 aa8.6□□□□□ -1.03
Col6a6-201ENSMUST00000060896 Gm10563F6WIE4 79 aa8.6□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 33.3 ms