RNA–Protein interactions for RNA: ENSMUST00000057438.6

Vcpip1-201, Transcript of Deubiquitinating protein VCIP135, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcpip1, Length 9,749 nt, Biotype protein coding, Subcellular localisation Nucleus, Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1-201ENSMUST00000057438 Gnai3Q9DC51 354 aa14.85□□□□□ -0.03
Vcpip1-201ENSMUST00000057438 Utp14aQ640M1 767 aaKnown RBP14.85□□□□□ -0.03
Vcpip1-201ENSMUST00000057438 Ccdc183A2AJB1 534 aa14.84□□□□□ -0.03
Vcpip1-201ENSMUST00000057438 SkilQ60665 675 aa14.84□□□□□ -0.03
Vcpip1-201ENSMUST00000057438 TxlnbQ8VBT1 685 aa14.84□□□□□ -0.03
Vcpip1-201ENSMUST00000057438 Fez1Q8K0X8 392 aa14.83□□□□□ -0.04
Vcpip1-201ENSMUST00000057438 A0A0U1RNP2 1173 aa14.83□□□□□ -0.04
Vcpip1-201ENSMUST00000057438 Nat10Q8K224 1024 aaKnown RBP14.83□□□□□ -0.04
Vcpip1-201ENSMUST00000057438 OptnQ8K3K8 584 aa14.83□□□□□ -0.04
Vcpip1-201ENSMUST00000057438 Q9D2X8 372 aa14.83□□□□□ -0.04
Vcpip1-201ENSMUST00000057438 Me1P06801 572 aa14.83□□□□□ -0.04
Vcpip1-201ENSMUST00000057438 Senp3Q9EP97 568 aaKnown RBP14.82□□□□□ -0.04
Vcpip1-201ENSMUST00000057438 Inpp5dQ9ES52 1191 aa14.82□□□□□ -0.04
Vcpip1-201ENSMUST00000057438 Paf1Q8K2T8 535 aa14.82□□□□□ -0.04
Vcpip1-201ENSMUST00000057438 SelenooQ9DBC0 667 aa14.81□□□□□ -0.04
Vcpip1-201ENSMUST00000057438 Triml2E9PW10 424 aa14.81□□□□□ -0.04
Vcpip1-201ENSMUST00000057438 Zscan10Q3URR7 782 aa14.8□□□□□ -0.04
Vcpip1-201ENSMUST00000057438 Ric3Q8BPM6 367 aa14.8□□□□□ -0.04
Vcpip1-201ENSMUST00000057438 Gnl3lQ6PGG6 577 aaKnown RBP14.8□□□□□ -0.04
Vcpip1-201ENSMUST00000057438 Cyp46a1Q9WVK8 500 aa14.8□□□□□ -0.04
Vcpip1-201ENSMUST00000057438 Map9Q3TRR0 646 aa14.8□□□□□ -0.04
Vcpip1-201ENSMUST00000057438 Stim1P70302 685 aa14.8□□□□□ -0.04
Vcpip1-201ENSMUST00000057438 Bag1Q60739 355 aa14.8□□□□□ -0.04
Vcpip1-201ENSMUST00000057438 Ccdc30Q8BVF4 654 aa14.8□□□□□ -0.04
Vcpip1-201ENSMUST00000057438 Gtf2a1Q99PM3 378 aa14.8□□□□□ -0.04
Vcpip1-201ENSMUST00000057438 Ccdc96Q9CR92 584 aa14.8□□□□□ -0.04
Vcpip1-201ENSMUST00000057438 Usp48Q3V0C5 1052 aa14.79□□□□□ -0.04
Vcpip1-201ENSMUST00000057438 PogkQ80TC5 607 aa14.79□□□□□ -0.04
Vcpip1-201ENSMUST00000057438 Hmox1P14901 289 aa14.79□□□□□ -0.04
Vcpip1-201ENSMUST00000057438 Zkscan1Q8BGS3 561 aaKnown RBP14.79□□□□□ -0.04
Vcpip1-201ENSMUST00000057438 Q8C5K5 320 aa14.79□□□□□ -0.04
Vcpip1-201ENSMUST00000057438 KarsQ99MN1 595 aaKnown RBP14.79□□□□□ -0.04
Vcpip1-201ENSMUST00000057438 Ppp2r3aB2RXC8 1150 aa14.79□□□□□ -0.04
Vcpip1-201ENSMUST00000057438 Neurod6P48986 337 aa14.79□□□□□ -0.04
Vcpip1-201ENSMUST00000057438 FanciQ8K368 1330 aa14.78□□□□□ -0.04
Vcpip1-201ENSMUST00000057438 ErbinQ80TH2 1402 aa14.78□□□□□ -0.04
Vcpip1-201ENSMUST00000057438 PnisrA2AJT4 805 aaKnown RBP14.77□□□□□ -0.04
Vcpip1-201ENSMUST00000057438 Jakmip2D3YXK0 820 aa14.77□□□□□ -0.04
Vcpip1-201ENSMUST00000057438 Usp40Q8BWR4 1235 aa14.77□□□□□ -0.04
Vcpip1-201ENSMUST00000057438 Cc2d1aQ8K1A6 943 aa14.77□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 Vps8Q0P5W1 1427 aa14.77□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 Zkscan2G3X952 960 aa14.77□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 Ercc6lQ8BHK9 1240 aa14.77□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 Med4Q9CQA5 270 aa14.77□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 Nsd2Q8BVE8 1365 aa14.77□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 Lrrc45Q8CIM1 670 aa14.77□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 Ecm2Q5FW85 670 aa14.76□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 Arid3cA6PWV5 409 aa14.76□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 Fam184aE9PW83 1143 aa14.76□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 Samd1D3YXK1 519 aa14.76□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 Sv2bQ8BG39 683 aa14.76□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 Usp16Q99LG0 825 aa14.76□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 Fam43aQ8BUP8 424 aa14.76□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 Gbp4Q61107 620 aa14.76□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 Swt1Q9DBQ9 907 aa14.76□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 Spag5Q7TME2 1165 aa14.75□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 Eif3aP23116 1344 aaKnown RBP14.75□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 Commd10Q8JZY2 202 aa14.75□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 Gcc1Q9D4H2 778 aa14.75□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 IbspQ61711 324 aa14.75□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 Gsto1O09131 240 aa14.75□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 NefhP19246 1090 aa14.75□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 Dnaaf4Q8R368 420 aa14.75□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 Ccdc83Q9D4V3 305 aa14.74□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 Odf2lQ9D478 642 aa14.74□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 CftrP26361 1476 aa14.74□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 Rbm25B2RY56 838 aaKnown RBP14.73□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 Cecr2E9Q2Z1 1453 aa14.73□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 Rnf214Q8BFU3 668 aaKnown RBP14.73□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 MicalclQ9D5U9 680 aa14.73□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 Nek4Q9Z1J2 792 aa14.73□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 Esx1O88933 382 aa14.72□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 TnmdQ9EP64 317 aa14.72□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 Kif20aP97329 887 aa14.72□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 Otud6bQ8K2H2 294 aa14.72□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 Ttll13A4Q9F6 804 aa14.72□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 Arglu1Q3UL36 271 aaKnown RBP14.72□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 Sycp2Q9CUU3 1500 aa14.72□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 Rsph6aQ8CDR2 708 aa14.72□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 Sart1Q9Z315 806 aaKnown RBP14.72□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 Plcd4Q8K3R3 807 aa14.72□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 Cep89Q9CZX2 791 aa14.72□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 Prl7d1P04769 244 aa14.71□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 Gtf2f1Q3THK3 508 aaKnown RBP14.71□□□□□ -0.05
Vcpip1-201ENSMUST00000057438 Ubap1lG3UW59 384 aa14.71□□□□□ -0.06
Vcpip1-201ENSMUST00000057438 Rab3gap2Q8BMG7 1366 aa14.71□□□□□ -0.06
Vcpip1-201ENSMUST00000057438 Gm21190A0A0G2JGJ6 266 aa14.7□□□□□ -0.06
Vcpip1-201ENSMUST00000057438 Erc1Q99MI1 1120 aa14.7□□□□□ -0.06
Vcpip1-201ENSMUST00000057438 ScaperF8VQ70 1398 aaKnown RBP14.7□□□□□ -0.06
Vcpip1-201ENSMUST00000057438 Stk38Q91VJ4 465 aa14.69□□□□□ -0.06
Vcpip1-201ENSMUST00000057438 Mical3Q8CJ19 1993 aa14.69□□□□□ -0.06
Vcpip1-201ENSMUST00000057438 FosbP13346 338 aa14.69□□□□□ -0.06
Vcpip1-201ENSMUST00000057438 Ncbp3Q8BZR9 615 aaKnown RBP14.69□□□□□ -0.06
Vcpip1-201ENSMUST00000057438 Cdkl5Q3UTQ8 938 aa14.69□□□□□ -0.06
Vcpip1-201ENSMUST00000057438 Rbm28Q8CGC6 750 aaKnown RBP14.69□□□□□ -0.06
Vcpip1-201ENSMUST00000057438 Q9D9S1 216 aa14.69□□□□□ -0.06
Vcpip1-201ENSMUST00000057438 Cavin1O54724 392 aa14.68□□□□□ -0.06
Vcpip1-201ENSMUST00000057438 CenpqQ9CPQ5 267 aa14.68□□□□□ -0.06
Vcpip1-201ENSMUST00000057438 Pank1Q8K4K6 548 aa14.68□□□□□ -0.06
Vcpip1-201ENSMUST00000057438 Fmnl2A2APV2 1086 aa14.68□□□□□ -0.06
Retrieved 100 of 22,080 RNA–protein pairs in 74.3 ms