RNA–Protein interactions for RNA: ENSMUST00000055353.8

Msx3-201, Transcript of Homeobox protein MSX-3, mousemouse

TSL 1 (best) BASIC

Gene Msx3, Length 2,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3-201ENSMUST00000055353 Lemd3Q9WU40 921 aa18.79■□□□□ 0.6
Msx3-201ENSMUST00000055353 Polr3glQ8R0C0 218 aa18.79■□□□□ 0.6
Msx3-201ENSMUST00000055353 Abca9Q8K449 1623 aa18.79■□□□□ 0.6
Msx3-201ENSMUST00000055353 Ak7Q9D2H2 614 aa18.78■□□□□ 0.6
Msx3-201ENSMUST00000055353 Zfyve16Q80U44 1528 aa18.78■□□□□ 0.6
Msx3-201ENSMUST00000055353 Tmem131lQ3U3D7 1597 aa18.78■□□□□ 0.6
Msx3-201ENSMUST00000055353 4933416C03RikQ3V063 378 aa18.78■□□□□ 0.6
Msx3-201ENSMUST00000055353 Trim26Q99PN3 545 aa18.78■□□□□ 0.6
Msx3-201ENSMUST00000055353 Rlbp1Q9Z275 317 aa18.77■□□□□ 0.6
Msx3-201ENSMUST00000055353 Rims1Q99NE5 1463 aa18.77■□□□□ 0.59
Msx3-201ENSMUST00000055353 ArxO35085 564 aa18.76■□□□□ 0.59
Msx3-201ENSMUST00000055353 Abca8aQ8K442 1620 aa18.76■□□□□ 0.59
Msx3-201ENSMUST00000055353 Ythdc2B2RR83 1445 aaKnown RBP18.76■□□□□ 0.59
Msx3-201ENSMUST00000055353 Ralbp1Q62172 648 aa18.75■□□□□ 0.59
Msx3-201ENSMUST00000055353 Stag3O70576 1240 aa18.75■□□□□ 0.59
Msx3-201ENSMUST00000055353 Apaf1O88879 1249 aa18.74■□□□□ 0.59
Msx3-201ENSMUST00000055353 Igf1rQ60751 1373 aa18.74■□□□□ 0.59
Msx3-201ENSMUST00000055353 Gprasp1Q5U4C1 1347 aa18.74■□□□□ 0.59
Msx3-201ENSMUST00000055353 Duxf3A0A0N4SV92 674 aa18.74■□□□□ 0.59
Msx3-201ENSMUST00000055353 Stard8Q8K031 1019 aa18.74■□□□□ 0.59
Msx3-201ENSMUST00000055353 Znf518aB2RRF6 1478 aaKnown RBP18.73■□□□□ 0.59
Msx3-201ENSMUST00000055353 Prex1Q69ZK0 1650 aa18.73■□□□□ 0.59
Msx3-201ENSMUST00000055353 Mapk8ip3Q9ESN9 1337 aa18.73■□□□□ 0.59
Msx3-201ENSMUST00000055353 Talpid3E9PV87 1520 aa18.73■□□□□ 0.59
Msx3-201ENSMUST00000055353 Zranb1Q7M760 708 aa18.73■□□□□ 0.59
Msx3-201ENSMUST00000055353 AU022751B1B0V2 589 aa18.72■□□□□ 0.59
Msx3-201ENSMUST00000055353 Plcd4Q8K3R3 807 aa18.72■□□□□ 0.59
Msx3-201ENSMUST00000055353 GsdmaQ9EST1 446 aa18.71■□□□□ 0.59
Msx3-201ENSMUST00000055353 IbtkQ6ZPR6 1352 aaKnown RBP18.71■□□□□ 0.59
Msx3-201ENSMUST00000055353 Ppm1gQ61074 542 aa18.7■□□□□ 0.58
Msx3-201ENSMUST00000055353 Hsp90ab1P11499 724 aaKnown RBP18.7■□□□□ 0.58
Msx3-201ENSMUST00000055353 Ipo8Q7TMY7 1010 aa18.7■□□□□ 0.58
Msx3-201ENSMUST00000055353 Znf521Q6KAS7 1311 aa18.7■□□□□ 0.58
Msx3-201ENSMUST00000055353 Adgrb3Q80ZF8 1522 aa18.69■□□□□ 0.58
Msx3-201ENSMUST00000055353 Ccdc183A2AJB1 534 aa18.69■□□□□ 0.58
Msx3-201ENSMUST00000055353 Mre11Q61216 706 aa18.69■□□□□ 0.58
Msx3-201ENSMUST00000055353 Ccdc9Q8VC31 543 aaKnown RBP18.69■□□□□ 0.58
Msx3-201ENSMUST00000055353 PtprtQ99M80 1454 aa18.69■□□□□ 0.58
Msx3-201ENSMUST00000055353 Efcab6Q6P1E8 1516 aa18.69■□□□□ 0.58
Msx3-201ENSMUST00000055353 Map4k4P97820 1233 aaKnown RBP18.69■□□□□ 0.58
Msx3-201ENSMUST00000055353 Zmym3Q9JLM4 1370 aa18.69■□□□□ 0.58
Msx3-201ENSMUST00000055353 Scaf11E9PZM7 1456 aaKnown RBP18.68■□□□□ 0.58
Msx3-201ENSMUST00000055353 Ppp1r3fQ9JIG4 799 aa18.68■□□□□ 0.58
Msx3-201ENSMUST00000055353 Ehbp1l1Q99MS7 1716 aa18.68■□□□□ 0.58
Msx3-201ENSMUST00000055353 Ecm2Q5FW85 670 aa18.67■□□□□ 0.58
Msx3-201ENSMUST00000055353 Trim58Q5NCC9 485 aa18.67■□□□□ 0.58
Msx3-201ENSMUST00000055353 DnmbpQ6TXD4 1580 aa18.67■□□□□ 0.58
Msx3-201ENSMUST00000055353 Irx3P81067 507 aa18.67■□□□□ 0.58
Msx3-201ENSMUST00000055353 Ksr2Q3UVC0 959 aa18.67■□□□□ 0.58
Msx3-201ENSMUST00000055353 Zfp777B9EKF4 885 aa18.66■□□□□ 0.58
Msx3-201ENSMUST00000055353 Cald1E9QA15 768 aaKnown RBP18.66■□□□□ 0.58
Msx3-201ENSMUST00000055353 Pnmal2G3X9N3 661 aa18.66■□□□□ 0.58
Msx3-201ENSMUST00000055353 Sipa1l1Q8C0T5 1782 aa18.66■□□□□ 0.58
Msx3-201ENSMUST00000055353 Rangap1P46061 589 aaKnown RBP18.65■□□□□ 0.58
Msx3-201ENSMUST00000055353 Iqsec2Q5DU25 1478 aa18.65■□□□□ 0.58
Msx3-201ENSMUST00000055353 KarsQ99MN1 595 aaKnown RBP18.64■□□□□ 0.58
Msx3-201ENSMUST00000055353 U2af1Q9D883 239 aaKnown RBP18.64■□□□□ 0.58
Msx3-201ENSMUST00000055353 Myom2Q14BI5 1463 aa18.64■□□□□ 0.57
Msx3-201ENSMUST00000055353 Trpm1Q2TV84 1622 aa18.63■□□□□ 0.57
Msx3-201ENSMUST00000055353 Ipo4Q8VI75 1082 aa18.63■□□□□ 0.57
Msx3-201ENSMUST00000055353 Stk26Q99JT2 416 aa18.63■□□□□ 0.57
Msx3-201ENSMUST00000055353 Uggt1Q6P5E4 1551 aa18.63■□□□□ 0.57
Msx3-201ENSMUST00000055353 Ptch1Q61115 1434 aa18.62■□□□□ 0.57
Msx3-201ENSMUST00000055353 Gm6268A2A3U9 297 aa18.62■□□□□ 0.57
Msx3-201ENSMUST00000055353 Tsen2Q6P7W5 460 aa18.62■□□□□ 0.57
Msx3-201ENSMUST00000055353 Ppp1r9bQ6R891 817 aaKnown RBP18.61■□□□□ 0.57
Msx3-201ENSMUST00000055353 Cluap1Q8R3P7 413 aa18.6■□□□□ 0.57
Msx3-201ENSMUST00000055353 Lrrc7Q80TE7 1490 aa18.59■□□□□ 0.57
Msx3-201ENSMUST00000055353 Topbp1Q6ZQF0 1515 aa18.59■□□□□ 0.57
Msx3-201ENSMUST00000055353 PalldQ9ET54 1408 aa18.59■□□□□ 0.57
Msx3-201ENSMUST00000055353 Gli2Q0VGT2 1544 aa18.59■□□□□ 0.57
Msx3-201ENSMUST00000055353 Prdm2A2A7B5 1709 aaKnown RBP18.59■□□□□ 0.57
Msx3-201ENSMUST00000055353 InsrP15208 1372 aa18.58■□□□□ 0.56
Msx3-201ENSMUST00000055353 IqubQ8CDK3 788 aa18.57■□□□□ 0.56
Msx3-201ENSMUST00000055353 Dusp27Q148W8 1138 aa18.56■□□□□ 0.56
Msx3-201ENSMUST00000055353 KdrP35918 1367 aa18.56■□□□□ 0.56
Msx3-201ENSMUST00000055353 OvosQ3UU35 1456 aa18.56■□□□□ 0.56
Msx3-201ENSMUST00000055353 Ppp2r3aB2RXC8 1150 aa18.55■□□□□ 0.56
Msx3-201ENSMUST00000055353 Exosc9Q9JHI7 438 aaKnown RBP18.55■□□□□ 0.56
Msx3-201ENSMUST00000055353 Atp1b4Q99ME6 356 aa18.55■□□□□ 0.56
Msx3-201ENSMUST00000055353 Fam135bQ9DAI6 1403 aa18.54■□□□□ 0.56
Msx3-201ENSMUST00000055353 Skint5A7XUY5 1461 aa18.54■□□□□ 0.56
Msx3-201ENSMUST00000055353 Znf330Q922H9 316 aa18.54■□□□□ 0.56
Msx3-201ENSMUST00000055353 MaddQ80U28 1577 aa18.54■□□□□ 0.56
Msx3-201ENSMUST00000055353 CenpjQ569L8 1344 aa18.53■□□□□ 0.56
Msx3-201ENSMUST00000055353 Ccar1Q8CH18 1146 aaKnown RBP18.52■□□□□ 0.55
Msx3-201ENSMUST00000055353 Tnpo1Q8BFY9 898 aaKnown RBP18.51■□□□□ 0.55
Msx3-201ENSMUST00000055353 Pdlim2Q8R1G6 349 aa18.51■□□□□ 0.55
Msx3-201ENSMUST00000055353 Tmc1Q8R4P5 757 aa18.51■□□□□ 0.55
Msx3-201ENSMUST00000055353 Cfap65Q3V0B4 1847 aa18.51■□□□□ 0.55
Msx3-201ENSMUST00000055353 AU019823E9PUQ3 292 aa18.5■□□□□ 0.55
Msx3-201ENSMUST00000055353 Depdc5P61460 1591 aa18.5■□□□□ 0.55
Msx3-201ENSMUST00000055353 Ift172Q6VH22 1749 aa18.49■□□□□ 0.55
Msx3-201ENSMUST00000055353 Adgrl1Q80TR1 1466 aa18.49■□□□□ 0.55
Msx3-201ENSMUST00000055353 Kiaa0556Q8C753 1610 aa18.49■□□□□ 0.55
Msx3-201ENSMUST00000055353 Senp3Q9EP97 568 aaKnown RBP18.48■□□□□ 0.55
Msx3-201ENSMUST00000055353 Ino80Q6ZPV2 1559 aa18.48■□□□□ 0.55
Msx3-201ENSMUST00000055353 Ttc37F8VPK0 1563 aa18.48■□□□□ 0.55
Msx3-201ENSMUST00000055353 Tecpr2Q3UH45 1423 aa18.48■□□□□ 0.55
Msx3-201ENSMUST00000055353 Sptbn5F6UCX4 1208 aa18.48■□□□□ 0.55
Retrieved 100 of 22,080 RNA–protein pairs in 30.8 ms