RNA–Protein interactions for RNA: ENSMUST00000027367.13

Ctdsp1-201, Transcript of Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdsp1, Length 2,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1-201ENSMUST00000027367 PtprmP28828 1452 aa26.76■■□□□ 1.87
Ctdsp1-201ENSMUST00000027367 MaddQ80U28 1577 aa26.76■■□□□ 1.87
Ctdsp1-201ENSMUST00000027367 NpatQ8BMA5 1420 aa26.76■■□□□ 1.87
Ctdsp1-201ENSMUST00000027367 Plcd4Q8K3R3 807 aa26.75■■□□□ 1.87
Ctdsp1-201ENSMUST00000027367 Esx1O88933 382 aa26.74■■□□□ 1.87
Ctdsp1-201ENSMUST00000027367 Atp1b4Q99ME6 356 aa26.74■■□□□ 1.87
Ctdsp1-201ENSMUST00000027367 Rad21Q61550 635 aaKnown RBP26.73■■□□□ 1.87
Ctdsp1-201ENSMUST00000027367 Rsph4aQ8BYM7 716 aa26.72■■□□□ 1.87
Ctdsp1-201ENSMUST00000027367 Kif13aQ9EQW7 1749 aa26.72■■□□□ 1.87
Ctdsp1-201ENSMUST00000027367 Prdm10Q3UTQ7 1184 aa26.72■■□□□ 1.87
Ctdsp1-201ENSMUST00000027367 Irx3P81067 507 aa26.71■■□□□ 1.87
Ctdsp1-201ENSMUST00000027367 Ppp4r2Q0VGB7 417 aa26.71■■□□□ 1.87
Ctdsp1-201ENSMUST00000027367 InsrP15208 1372 aa26.71■■□□□ 1.87
Ctdsp1-201ENSMUST00000027367 Stk26Q99JT2 416 aa26.71■■□□□ 1.87
Ctdsp1-201ENSMUST00000027367 Shq1Q7TMX5 569 aa26.7■■□□□ 1.87
Ctdsp1-201ENSMUST00000027367 Atf7ipQ7TT18 1306 aa26.7■■□□□ 1.86
Ctdsp1-201ENSMUST00000027367 Wdr43Q6ZQL4 677 aaKnown RBP26.69■■□□□ 1.86
Ctdsp1-201ENSMUST00000027367 Kank1E9Q238 1360 aa26.69■■□□□ 1.86
Ctdsp1-201ENSMUST00000027367 Arhgap23Q69ZH9 1483 aa26.68■■□□□ 1.86
Ctdsp1-201ENSMUST00000027367 CenpjQ569L8 1344 aa26.68■■□□□ 1.86
Ctdsp1-201ENSMUST00000027367 Gprasp1Q5U4C1 1347 aa26.68■■□□□ 1.86
Ctdsp1-201ENSMUST00000027367 Erbb3Q61526 1339 aa26.68■■□□□ 1.86
Ctdsp1-201ENSMUST00000027367 Itsn1Q9Z0R4 1714 aa26.66■■□□□ 1.86
Ctdsp1-201ENSMUST00000027367 Nlrp6Q91WS2 869 aa26.65■■□□□ 1.86
Ctdsp1-201ENSMUST00000027367 Naip7Q9JIB3 1402 aa26.64■■□□□ 1.85
Ctdsp1-201ENSMUST00000027367 RictorQ6QI06 1708 aa26.64■■□□□ 1.85
Ctdsp1-201ENSMUST00000027367 Pak3Q61036 559 aa26.61■■□□□ 1.85
Ctdsp1-201ENSMUST00000027367 Arhgef28P97433 1693 aa26.61■■□□□ 1.85
Ctdsp1-201ENSMUST00000027367 CrbnQ8C7D2 445 aa26.61■■□□□ 1.85
Ctdsp1-201ENSMUST00000027367 Cep170bQ80U49 1574 aa26.6■■□□□ 1.85
Ctdsp1-201ENSMUST00000027367 Eif2ak4Q9QZ05 1648 aa26.6■■□□□ 1.85
Ctdsp1-201ENSMUST00000027367 Q9D9H8 365 aa26.6■■□□□ 1.85
Ctdsp1-201ENSMUST00000027367 Kif16bB1AVY7 1312 aa26.58■■□□□ 1.85
Ctdsp1-201ENSMUST00000027367 Ercc6l2Q9JIM3 1537 aa26.58■■□□□ 1.85
Ctdsp1-201ENSMUST00000027367 Mink1Q9JM52 1308 aa26.55■■□□□ 1.84
Ctdsp1-201ENSMUST00000027367 Exosc9Q9JHI7 438 aaKnown RBP26.55■■□□□ 1.84
Ctdsp1-201ENSMUST00000027367 KdrP35918 1367 aa26.54■■□□□ 1.84
Ctdsp1-201ENSMUST00000027367 Liat1Q810M6 228 aa26.54■■□□□ 1.84
Ctdsp1-201ENSMUST00000027367 Zranb1Q7M760 708 aa26.53■■□□□ 1.84
Ctdsp1-201ENSMUST00000027367 Utp14aQ640M1 767 aaKnown RBP26.52■■□□□ 1.84
Ctdsp1-201ENSMUST00000027367 Dnajc5gQ8C632 165 aa26.52■■□□□ 1.84
Ctdsp1-201ENSMUST00000027367 Kiaa1107Q80TK0 1369 aa26.51■■□□□ 1.83
Ctdsp1-201ENSMUST00000027367 Egfem1Q8C088 590 aa26.5■■□□□ 1.83
Ctdsp1-201ENSMUST00000027367 Scaf11E9PZM7 1456 aaKnown RBP26.5■■□□□ 1.83
Ctdsp1-201ENSMUST00000027367 Usp19Q3UJD6 1360 aa26.5■■□□□ 1.83
Ctdsp1-201ENSMUST00000027367 Zc3h13E9Q784 1729 aaKnown RBP26.5■■□□□ 1.83
Ctdsp1-201ENSMUST00000027367 Nrxn1Q9CS84 1514 aa26.48■■□□□ 1.83
Ctdsp1-201ENSMUST00000027367 Kcnh8P59111 1102 aa26.48■■□□□ 1.83
Ctdsp1-201ENSMUST00000027367 Hsp90aa1P07901 733 aaKnown RBP26.47■■□□□ 1.83
Ctdsp1-201ENSMUST00000027367 Abca14E9Q8F8 1683 aa26.47■■□□□ 1.83
Ctdsp1-201ENSMUST00000027367 Atp2b2Q9R0K7 1198 aa26.46■■□□□ 1.83
Ctdsp1-201ENSMUST00000027367 IbtkQ6ZPR6 1352 aaKnown RBP26.45■■□□□ 1.82
Ctdsp1-201ENSMUST00000027367 Golga2Q921M4 999 aa26.44■■□□□ 1.82
Ctdsp1-201ENSMUST00000027367 Cald1E9QA15 768 aaKnown RBP26.44■■□□□ 1.82
Ctdsp1-201ENSMUST00000027367 Ipo4Q8VI75 1082 aa26.44■■□□□ 1.82
Ctdsp1-201ENSMUST00000027367 P2rx7Q9Z1M0 595 aa26.44■■□□□ 1.82
Ctdsp1-201ENSMUST00000027367 Speer4f1Q9D5Q6 258 aa26.44■■□□□ 1.82
Ctdsp1-201ENSMUST00000027367 Asxl2Q8BZ32 1370 aa26.43■■□□□ 1.82
Ctdsp1-201ENSMUST00000027367 Plekhg1F6S200 1446 aa26.42■■□□□ 1.82
Ctdsp1-201ENSMUST00000027367 Gsto1O09131 240 aa26.42■■□□□ 1.82
Ctdsp1-201ENSMUST00000027367 PplQ9R269 1755 aa26.41■■□□□ 1.82
Ctdsp1-201ENSMUST00000027367 Cdk19Q8BWD8 501 aa26.41■■□□□ 1.82
Ctdsp1-201ENSMUST00000027367 Ttc41Q692V3 1318 aa26.4■■□□□ 1.82
Ctdsp1-201ENSMUST00000027367 Adamtsl3G3UXC7 1706 aa26.4■■□□□ 1.82
Ctdsp1-201ENSMUST00000027367 Med14A2ABV5 1459 aaKnown RBP26.39■■□□□ 1.82
Ctdsp1-201ENSMUST00000027367 Neurod2Q62414 383 aa26.38■■□□□ 1.81
Ctdsp1-201ENSMUST00000027367 Plppr3Q7TPB0 716 aa26.38■■□□□ 1.81
Ctdsp1-201ENSMUST00000027367 NktrP30415 1453 aa26.37■■□□□ 1.81
Ctdsp1-201ENSMUST00000027367 Dip2aQ8BWT5 1523 aa26.37■■□□□ 1.81
Ctdsp1-201ENSMUST00000027367 GsdmaQ9EST1 446 aa26.37■■□□□ 1.81
Ctdsp1-201ENSMUST00000027367 Txndc2Q6P902 515 aa26.36■■□□□ 1.81
Ctdsp1-201ENSMUST00000027367 Psme1P97371 249 aa26.36■■□□□ 1.81
Ctdsp1-201ENSMUST00000027367 Uspl1Q3ULM6 1089 aa26.36■■□□□ 1.81
Ctdsp1-201ENSMUST00000027367 Ccdc30Q8BVF4 654 aa26.36■■□□□ 1.81
Ctdsp1-201ENSMUST00000027367 Ipo9Q91YE6 1041 aa26.35■■□□□ 1.81
Ctdsp1-201ENSMUST00000027367 Plekhh1Q80TI1 1356 aa26.34■■□□□ 1.81
Ctdsp1-201ENSMUST00000027367 Nwd1A6H603 1563 aa26.33■■□□□ 1.81
Ctdsp1-201ENSMUST00000027367 Slc4a3P16283 1227 aa26.33■■□□□ 1.81
Ctdsp1-201ENSMUST00000027367 Map4k4P97820 1233 aaKnown RBP26.32■■□□□ 1.8
Ctdsp1-201ENSMUST00000027367 Adgrl1Q80TR1 1466 aa26.32■■□□□ 1.8
Ctdsp1-201ENSMUST00000027367 NeflP08551 543 aa26.31■■□□□ 1.8
Ctdsp1-201ENSMUST00000027367 Chd2E9PZM4 1827 aaKnown RBP26.31■■□□□ 1.8
Ctdsp1-201ENSMUST00000027367 NinlQ6ZQ12 1394 aa26.31■■□□□ 1.8
Ctdsp1-201ENSMUST00000027367 FanciQ8K368 1330 aa26.29■■□□□ 1.8
Ctdsp1-201ENSMUST00000027367 Ralbp1Q62172 648 aa26.28■■□□□ 1.8
Ctdsp1-201ENSMUST00000027367 Safb2Q80YR5 991 aaKnown RBP26.27■■□□□ 1.8
Ctdsp1-201ENSMUST00000027367 IghaA0A0A6YXW6 389 aa26.26■■□□□ 1.79
Ctdsp1-201ENSMUST00000027367 Rwdd1Q9CQK7 243 aa26.26■■□□□ 1.79
Ctdsp1-201ENSMUST00000027367 Iqsec2Q5DU25 1478 aa26.26■■□□□ 1.79
Ctdsp1-201ENSMUST00000027367 Gemin5Q8BX17 1502 aaKnown RBP26.25■■□□□ 1.79
Ctdsp1-201ENSMUST00000027367 Prkrip1Q9CWV6 186 aaKnown RBP26.25■■□□□ 1.79
Ctdsp1-201ENSMUST00000027367 Tsen2Q6P7W5 460 aa26.25■■□□□ 1.79
Ctdsp1-201ENSMUST00000027367 U2af1Q9D883 239 aaKnown RBP26.24■■□□□ 1.79
Ctdsp1-201ENSMUST00000027367 Tcerg1Q8CGF7 1100 aaKnown RBP26.23■■□□□ 1.79
Ctdsp1-201ENSMUST00000027367 Map3k19E9Q3S4 1311 aa26.21■■□□□ 1.79
Ctdsp1-201ENSMUST00000027367 Gas2l2Q5SSG4 860 aa26.2■■□□□ 1.78
Ctdsp1-201ENSMUST00000027367 Apaf1O88879 1249 aa26.19■■□□□ 1.78
Ctdsp1-201ENSMUST00000027367 Apbb1Q9QXJ1 710 aa26.19■■□□□ 1.78
Ctdsp1-201ENSMUST00000027367 TnikP83510 1323 aa26.18■■□□□ 1.78
Ctdsp1-201ENSMUST00000027367 Atxn3Q9CVD2 355 aa26.17■■□□□ 1.78
Retrieved 100 of 22,080 RNA–protein pairs in 213.8 ms