RNA–Protein interactions for RNA: ENSMUST00000023123.14

Col2a1-201, Transcript of Collagen alpha-1(II) chain, mousemouse

TSL 1 (best) BASIC

Gene Col2a1, Length 5,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-201ENSMUST00000023123 Nol12Q8BG17 217 aa18.33■□□□□ 0.52
Col2a1-201ENSMUST00000023123 Ppp2r1aQ76MZ3 589 aa18.32■□□□□ 0.52
Col2a1-201ENSMUST00000023123 Hnrnpul1Q8VDM6 859 aaKnown RBP18.32■□□□□ 0.52
Col2a1-201ENSMUST00000023123 Zkscan2G3X952 960 aa18.32■□□□□ 0.52
Col2a1-201ENSMUST00000023123 Rufy1Q8BIJ7 712 aa18.32■□□□□ 0.52
Col2a1-201ENSMUST00000023123 AnlnQ8K298 1121 aaKnown RBP18.32■□□□□ 0.52
Col2a1-201ENSMUST00000023123 Arid4aF8VPQ2 1261 aaKnown RBP18.32■□□□□ 0.52
Col2a1-201ENSMUST00000023123 Rab3gap2Q8BMG7 1366 aa18.31■□□□□ 0.52
Col2a1-201ENSMUST00000023123 Psma5Q9Z2U1 241 aaKnown RBP18.31■□□□□ 0.52
Col2a1-201ENSMUST00000023123 Rbm10Q99KG3 930 aaKnown RBP18.31■□□□□ 0.52
Col2a1-201ENSMUST00000023123 Usp48Q3V0C5 1052 aa18.31■□□□□ 0.52
Col2a1-201ENSMUST00000023123 Nutm1Q8BHP2 1126 aa18.31■□□□□ 0.52
Col2a1-201ENSMUST00000023123 Cfap99A0A140LIX9 648 aa18.3■□□□□ 0.52
Col2a1-201ENSMUST00000023123 Nop14Q8R3N1 860 aaKnown RBP18.29■□□□□ 0.52
Col2a1-201ENSMUST00000023123 Sptbn5F6UCX4 1208 aa18.29■□□□□ 0.52
Col2a1-201ENSMUST00000023123 Kif3cO35066 796 aa18.29■□□□□ 0.52
Col2a1-201ENSMUST00000023123 Plekhg5Q66T02 1073 aa18.29■□□□□ 0.52
Col2a1-201ENSMUST00000023123 Q8BT18 775 aa18.28■□□□□ 0.52
Col2a1-201ENSMUST00000023123 Ssh1Q76I79 1042 aa18.27■□□□□ 0.52
Col2a1-201ENSMUST00000023123 Sv2bQ8BG39 683 aa18.27■□□□□ 0.51
Col2a1-201ENSMUST00000023123 Wdr78E9PYY5 807 aa18.27■□□□□ 0.51
Col2a1-201ENSMUST00000023123 Gsto1O09131 240 aa18.26■□□□□ 0.51
Col2a1-201ENSMUST00000023123 Kif20aP97329 887 aa18.26■□□□□ 0.51
Col2a1-201ENSMUST00000023123 Q8C5K5 320 aa18.26■□□□□ 0.51
Col2a1-201ENSMUST00000023123 Cavin4A2AMM0 362 aa18.26■□□□□ 0.51
Col2a1-201ENSMUST00000023123 Fam193aQ8CGI1 1231 aaKnown RBP18.26■□□□□ 0.51
Col2a1-201ENSMUST00000023123 Gcc1Q9D4H2 778 aa18.26■□□□□ 0.51
Col2a1-201ENSMUST00000023123 BicraF8VPZ9 1578 aa18.25■□□□□ 0.51
Col2a1-201ENSMUST00000023123 Ift140E9PY46 1464 aa18.25■□□□□ 0.51
Col2a1-201ENSMUST00000023123 Vps53Q8CCB4 832 aa18.25■□□□□ 0.51
Col2a1-201ENSMUST00000023123 Cc2d2aQ8CFW7 1633 aa18.25■□□□□ 0.51
Col2a1-201ENSMUST00000023123 Cfdp1O88271 295 aaKnown RBP18.25■□□□□ 0.51
Col2a1-201ENSMUST00000023123 Efcab5A0JP43 1406 aa18.25■□□□□ 0.51
Col2a1-201ENSMUST00000023123 Necab1Q8BG18 352 aa18.25■□□□□ 0.51
Col2a1-201ENSMUST00000023123 Ncapd3Q6ZQK0 1506 aa18.25■□□□□ 0.51
Col2a1-201ENSMUST00000023123 Dhx8A2A4P0 1244 aaKnown RBP18.24■□□□□ 0.51
Col2a1-201ENSMUST00000023123 Neurod6P48986 337 aa18.24■□□□□ 0.51
Col2a1-201ENSMUST00000023123 Ncoa2Q61026 1462 aa18.24■□□□□ 0.51
Col2a1-201ENSMUST00000023123 Chmp7Q8R1T1 451 aa18.24■□□□□ 0.51
Col2a1-201ENSMUST00000023123 Tmco3Q8BH01 678 aa18.24■□□□□ 0.51
Col2a1-201ENSMUST00000023123 A0A0U1RNP2 1173 aa18.23■□□□□ 0.51
Col2a1-201ENSMUST00000023123 Olfml1Q8BSH2 233 aa18.23■□□□□ 0.51
Col2a1-201ENSMUST00000023123 Puf60Q3UEB3 564 aaKnown RBP18.23■□□□□ 0.51
Col2a1-201ENSMUST00000023123 Naip1Q9QWK5 1403 aa18.22■□□□□ 0.51
Col2a1-201ENSMUST00000023123 Gm21190A0A0G2JGJ6 266 aa18.22■□□□□ 0.51
Col2a1-201ENSMUST00000023123 FosbP13346 338 aa18.22■□□□□ 0.51
Col2a1-201ENSMUST00000023123 Shroom4Q1W617 1475 aa18.22■□□□□ 0.51
Col2a1-201ENSMUST00000023123 Stk11ipQ3TAA7 1072 aa18.22■□□□□ 0.51
Col2a1-201ENSMUST00000023123 Gsdma3Q5Y4Y6 464 aa18.22■□□□□ 0.51
Col2a1-201ENSMUST00000023123 Fmnl2A2APV2 1086 aa18.21■□□□□ 0.51
Col2a1-201ENSMUST00000023123 Zfp644E9QA22 1323 aa18.21■□□□□ 0.51
Col2a1-201ENSMUST00000023123 Frmpd1A2AKB4 1549 aa18.21■□□□□ 0.51
Col2a1-201ENSMUST00000023123 Ggt6Q6PDE7 497 aa18.21■□□□□ 0.51
Col2a1-201ENSMUST00000023123 Kcnh8P59111 1102 aa18.21■□□□□ 0.51
Col2a1-201ENSMUST00000023123 Trim29Q8R2Q0 587 aa18.21■□□□□ 0.51
Col2a1-201ENSMUST00000023123 FanciQ8K368 1330 aa18.2■□□□□ 0.5
Col2a1-201ENSMUST00000023123 Odf2A3KGV1 830 aaKnown RBP18.2■□□□□ 0.5
Col2a1-201ENSMUST00000023123 CrcpO35427 148 aa18.2■□□□□ 0.5
Col2a1-201ENSMUST00000023123 Paxip1Q6NZQ4 1056 aa18.2■□□□□ 0.5
Col2a1-201ENSMUST00000023123 Cog6Q8R3I3 657 aa18.2■□□□□ 0.5
Col2a1-201ENSMUST00000023123 Kif18aQ91WD7 886 aa18.2■□□□□ 0.5
Col2a1-201ENSMUST00000023123 Rad54l2Q99NG0 1466 aa18.2■□□□□ 0.5
Col2a1-201ENSMUST00000023123 Myom3A2ABU4 1439 aa18.2■□□□□ 0.5
Col2a1-201ENSMUST00000023123 Q9D9S1 216 aa18.2■□□□□ 0.5
Col2a1-201ENSMUST00000023123 Chaf1aQ9QWF0 911 aa18.2■□□□□ 0.5
Col2a1-201ENSMUST00000023123 Pde4cQ3UEI1 686 aa18.18■□□□□ 0.5
Col2a1-201ENSMUST00000023123 Me1P06801 572 aa18.18■□□□□ 0.5
Col2a1-201ENSMUST00000023123 Prdm16A2A935 1275 aa18.18■□□□□ 0.5
Col2a1-201ENSMUST00000023123 Fam184aE9PW83 1143 aa18.18■□□□□ 0.5
Col2a1-201ENSMUST00000023123 Hoxa7P02830 229 aa18.18■□□□□ 0.5
Col2a1-201ENSMUST00000023123 NexnQ7TPW1 607 aa18.18■□□□□ 0.5
Col2a1-201ENSMUST00000023123 Jph4Q80WT0 628 aa18.18■□□□□ 0.5
Col2a1-201ENSMUST00000023123 Tubb6Q922F4 447 aa18.17■□□□□ 0.5
Col2a1-201ENSMUST00000023123 Stk3Q9JI10 497 aa18.17■□□□□ 0.5
Col2a1-201ENSMUST00000023123 Top2aQ01320 1528 aaKnown RBP18.17■□□□□ 0.5
Col2a1-201ENSMUST00000023123 Apaf1O88879 1249 aa18.17■□□□□ 0.5
Col2a1-201ENSMUST00000023123 CalrP14211 416 aaKnown RBP18.16■□□□□ 0.5
Col2a1-201ENSMUST00000023123 Ccp110Q7TSH4 1004 aa18.16■□□□□ 0.5
Col2a1-201ENSMUST00000023123 Urb2E9Q7L1 1524 aaKnown RBP18.16■□□□□ 0.5
Col2a1-201ENSMUST00000023123 Ubap1lG3UW59 384 aa18.16■□□□□ 0.5
Col2a1-201ENSMUST00000023123 HmmrQ00547 794 aaKnown RBP18.16■□□□□ 0.5
Col2a1-201ENSMUST00000023123 Def6Q8C2K1 630 aa18.16■□□□□ 0.5
Col2a1-201ENSMUST00000023123 Dctn1O08788 1281 aa18.16■□□□□ 0.5
Col2a1-201ENSMUST00000023123 Smc2Q8CG48 1191 aaKnown RBP18.16■□□□□ 0.5
Col2a1-201ENSMUST00000023123 Ccdc43Q9CR29 222 aaKnown RBP18.15■□□□□ 0.5
Col2a1-201ENSMUST00000023123 Nphp1Q9QY53 687 aa18.15■□□□□ 0.5
Col2a1-201ENSMUST00000023123 Mrvi1Q9WUX5 899 aaKnown RBP18.15■□□□□ 0.5
Col2a1-201ENSMUST00000023123 Duox2A2AQ99 1517 aa18.15■□□□□ 0.5
Col2a1-201ENSMUST00000023123 Pabpn1Q8CCS6 302 aaKnown RBP18.15■□□□□ 0.5
Col2a1-201ENSMUST00000023123 Gnai2P08752 355 aaKnown RBP18.15■□□□□ 0.5
Col2a1-201ENSMUST00000023123 TnmdQ9EP64 317 aa18.14■□□□□ 0.49
Col2a1-201ENSMUST00000023123 Soga1E1U8D0 1418 aa18.14■□□□□ 0.49
Col2a1-201ENSMUST00000023123 CastP51125 788 aa18.14■□□□□ 0.49
Col2a1-201ENSMUST00000023123 March6Q6ZQ89 909 aa18.13■□□□□ 0.49
Col2a1-201ENSMUST00000023123 Dhx16G3X8X0 1044 aaKnown RBP18.13■□□□□ 0.49
Col2a1-201ENSMUST00000023123 Znf771Q8BJ90 317 aa18.13■□□□□ 0.49
Col2a1-201ENSMUST00000023123 Hap1O35668 628 aa18.12■□□□□ 0.49
Col2a1-201ENSMUST00000023123 Cnnm3Q32NY4 713 aa18.12■□□□□ 0.49
Col2a1-201ENSMUST00000023123 Babam1Q3UI43 333 aa18.12■□□□□ 0.49
Col2a1-201ENSMUST00000023123 NefhP19246 1090 aa18.12■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 14.8 ms