RNA–Protein interactions for RNA: ENSMUST00000020163.6

Nedd1-201, Transcript of Protein NEDD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nedd1, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd1-201ENSMUST00000020163 Kif7B7ZNG0 1348 aa12.56□□□□□ -0.4
Nedd1-201ENSMUST00000020163 Nlrp6Q91WS2 869 aa12.56□□□□□ -0.4
Nedd1-201ENSMUST00000020163 Map4k4P97820 1233 aaKnown RBP12.55□□□□□ -0.4
Nedd1-201ENSMUST00000020163 Neo1P97798 1493 aa12.54□□□□□ -0.4
Nedd1-201ENSMUST00000020163 Hs1bp3Q3TC93 395 aa12.54□□□□□ -0.4
Nedd1-201ENSMUST00000020163 Fam208aQ69ZR9 1610 aaKnown RBP12.54□□□□□ -0.4
Nedd1-201ENSMUST00000020163 Robo2Q7TPD3 1470 aa12.54□□□□□ -0.4
Nedd1-201ENSMUST00000020163 Armcx1Q9CX83 456 aa12.54□□□□□ -0.4
Nedd1-201ENSMUST00000020163 Iqsec2Q5DU25 1478 aa12.53□□□□□ -0.4
Nedd1-201ENSMUST00000020163 Edc4Q3UJB9 1406 aaKnown RBP12.53□□□□□ -0.4
Nedd1-201ENSMUST00000020163 Hecw1Q8K4P8 1604 aa12.53□□□□□ -0.4
Nedd1-201ENSMUST00000020163 Plcb2A3KGF7 1181 aa12.53□□□□□ -0.4
Nedd1-201ENSMUST00000020163 Pnmal2G3X9N3 661 aa12.53□□□□□ -0.4
Nedd1-201ENSMUST00000020163 Rrp7aQ9D1C9 280 aaKnown RBP12.53□□□□□ -0.4
Nedd1-201ENSMUST00000020163 Mfap1aC0HKD8 439 aaKnown RBP12.53□□□□□ -0.4
Nedd1-201ENSMUST00000020163 Mfap1bC0HKD9 439 aaKnown RBP12.53□□□□□ -0.4
Nedd1-201ENSMUST00000020163 Dhx16G3X8X0 1044 aaKnown RBP12.53□□□□□ -0.4
Nedd1-201ENSMUST00000020163 Chd1P40201 1711 aa12.53□□□□□ -0.4
Nedd1-201ENSMUST00000020163 Gprasp1Q5U4C1 1347 aa12.52□□□□□ -0.4
Nedd1-201ENSMUST00000020163 Ncapd2Q8K2Z4 1392 aa12.52□□□□□ -0.41
Nedd1-201ENSMUST00000020163 Myom1Q62234 1667 aaKnown RBP12.51□□□□□ -0.41
Nedd1-201ENSMUST00000020163 Rbm25B2RY56 838 aaKnown RBP12.51□□□□□ -0.41
Nedd1-201ENSMUST00000020163 SlkO54988 1233 aa12.51□□□□□ -0.41
Nedd1-201ENSMUST00000020163 Rsph3aQ3UFY4 516 aa12.51□□□□□ -0.41
Nedd1-201ENSMUST00000020163 Map7O88735 730 aa12.51□□□□□ -0.41
Nedd1-201ENSMUST00000020163 Pdcl2Q78Y63 240 aa12.51□□□□□ -0.41
Nedd1-201ENSMUST00000020163 Gm32742A0A1B0GT42 1604 aa12.5□□□□□ -0.41
Nedd1-201ENSMUST00000020163 Pcdh10E9PXQ7 1057 aa12.5□□□□□ -0.41
Nedd1-201ENSMUST00000020163 Ripk4Q9ERK0 786 aa12.5□□□□□ -0.41
Nedd1-201ENSMUST00000020163 Cul9Q80TT8 1865 aa12.49□□□□□ -0.41
Nedd1-201ENSMUST00000020163 Gm10093D3YYI8 482 aa12.49□□□□□ -0.41
Nedd1-201ENSMUST00000020163 Hdac1O09106 482 aaKnown RBP12.49□□□□□ -0.41
Nedd1-201ENSMUST00000020163 Irf5P56477 497 aa12.48□□□□□ -0.41
Nedd1-201ENSMUST00000020163 Gse1Q3U3C9 1213 aa12.48□□□□□ -0.41
Nedd1-201ENSMUST00000020163 Nsfl1cQ9CZ44 370 aaKnown RBP12.48□□□□□ -0.41
Nedd1-201ENSMUST00000020163 Pdcd11Q6NS46 1862 aaKnown RBP12.48□□□□□ -0.41
Nedd1-201ENSMUST00000020163 AI481877A2ALV5 1481 aa12.47□□□□□ -0.41
Nedd1-201ENSMUST00000020163 VgfQ0VGU4 617 aa12.47□□□□□ -0.41
Nedd1-201ENSMUST00000020163 Uggt2E9Q4X2 1504 aa12.47□□□□□ -0.41
Nedd1-201ENSMUST00000020163 ScaperF8VQ70 1398 aaKnown RBP12.47□□□□□ -0.41
Nedd1-201ENSMUST00000020163 Ncbp3Q8BZR9 615 aaKnown RBP12.47□□□□□ -0.41
Nedd1-201ENSMUST00000020163 Atxn3Q9CVD2 355 aa12.47□□□□□ -0.41
Nedd1-201ENSMUST00000020163 KdrP35918 1367 aa12.47□□□□□ -0.41
Nedd1-201ENSMUST00000020163 Jph4Q80WT0 628 aa12.46□□□□□ -0.41
Nedd1-201ENSMUST00000020163 Pdia4P08003 638 aaKnown RBP12.46□□□□□ -0.41
Nedd1-201ENSMUST00000020163 Erbb4Q61527 1308 aa12.46□□□□□ -0.42
Nedd1-201ENSMUST00000020163 Abcc6Q9R1S7 1498 aa12.45□□□□□ -0.42
Nedd1-201ENSMUST00000020163 Znf608Q56A10 1511 aa12.45□□□□□ -0.42
Nedd1-201ENSMUST00000020163 Kdm4cQ8VCD7 1054 aa12.45□□□□□ -0.42
Nedd1-201ENSMUST00000020163 Kif18aQ91WD7 886 aa12.45□□□□□ -0.42
Nedd1-201ENSMUST00000020163 Zfyve16Q80U44 1528 aa12.44□□□□□ -0.42
Nedd1-201ENSMUST00000020163 Rbm10Q99KG3 930 aaKnown RBP12.44□□□□□ -0.42
Nedd1-201ENSMUST00000020163 Fancd2Q80V62 1450 aa12.44□□□□□ -0.42
Nedd1-201ENSMUST00000020163 Rnf17Q99MV7 1640 aa12.44□□□□□ -0.42
Nedd1-201ENSMUST00000020163 Cep152A2AUM9 1736 aaKnown RBP12.44□□□□□ -0.42
Nedd1-201ENSMUST00000020163 Lekr1B2RVN1 116 aa12.44□□□□□ -0.42
Nedd1-201ENSMUST00000020163 Tmx3Q8BXZ1 456 aa12.44□□□□□ -0.42
Nedd1-201ENSMUST00000020163 IbtkQ6ZPR6 1352 aaKnown RBP12.43□□□□□ -0.42
Nedd1-201ENSMUST00000020163 AU019823E9PUQ3 292 aa12.43□□□□□ -0.42
Nedd1-201ENSMUST00000020163 Ccar1Q8CH18 1146 aaKnown RBP12.43□□□□□ -0.42
Nedd1-201ENSMUST00000020163 Stard8Q8K031 1019 aa12.43□□□□□ -0.42
Nedd1-201ENSMUST00000020163 Cluap1Q8R3P7 413 aa12.43□□□□□ -0.42
Nedd1-201ENSMUST00000020163 Ush1cQ9ES64 910 aa12.43□□□□□ -0.42
Nedd1-201ENSMUST00000020163 Rfx1P48377 963 aa12.42□□□□□ -0.42
Nedd1-201ENSMUST00000020163 Mknk2Q8CDB0 459 aa12.42□□□□□ -0.42
Nedd1-201ENSMUST00000020163 Talpid3E9PV87 1520 aa12.42□□□□□ -0.42
Nedd1-201ENSMUST00000020163 Zfp91Q62511 572 aa12.42□□□□□ -0.42
Nedd1-201ENSMUST00000020163 Fez1Q8K0X8 392 aa12.42□□□□□ -0.42
Nedd1-201ENSMUST00000020163 Nsd2Q8BVE8 1365 aa12.42□□□□□ -0.42
Nedd1-201ENSMUST00000020163 Ksr2Q3UVC0 959 aa12.42□□□□□ -0.42
Nedd1-201ENSMUST00000020163 Hfm1D3Z4R1 1434 aa12.41□□□□□ -0.42
Nedd1-201ENSMUST00000020163 Chrna2Q91X60 512 aa12.41□□□□□ -0.42
Nedd1-201ENSMUST00000020163 KnstrnQ9D9Z1 312 aaKnown RBP12.41□□□□□ -0.42
Nedd1-201ENSMUST00000020163 GsdmaQ9EST1 446 aa12.41□□□□□ -0.42
Nedd1-201ENSMUST00000020163 Arhgap5P97393 1501 aa12.41□□□□□ -0.42
Nedd1-201ENSMUST00000020163 Ppp1r18Q8BQ30 594 aa12.41□□□□□ -0.42
Nedd1-201ENSMUST00000020163 Polr3glQ8R0C0 218 aa12.41□□□□□ -0.42
Nedd1-201ENSMUST00000020163 Brd1E9PZ26 1189 aaKnown RBP12.4□□□□□ -0.42
Nedd1-201ENSMUST00000020163 Kdm2aP59997 1161 aa12.4□□□□□ -0.42
Nedd1-201ENSMUST00000020163 Pde4cQ3UEI1 686 aa12.4□□□□□ -0.42
Nedd1-201ENSMUST00000020163 SkilQ60665 675 aa12.4□□□□□ -0.42
Nedd1-201ENSMUST00000020163 DekQ7TNV0 380 aaKnown RBP12.4□□□□□ -0.42
Nedd1-201ENSMUST00000020163 Abca8bQ8K440 1620 aa12.4□□□□□ -0.42
Nedd1-201ENSMUST00000020163 Cog6Q8R3I3 657 aa12.4□□□□□ -0.42
Nedd1-201ENSMUST00000020163 Ppp1r3fQ9JIG4 799 aa12.4□□□□□ -0.42
Nedd1-201ENSMUST00000020163 Spag9Q58A65 1321 aaKnown RBP12.4□□□□□ -0.42
Nedd1-201ENSMUST00000020163 Kif1bQ60575 1816 aaKnown RBP12.4□□□□□ -0.42
Nedd1-201ENSMUST00000020163 Adgrl1Q80TR1 1466 aa12.4□□□□□ -0.42
Nedd1-201ENSMUST00000020163 Gtf2e1Q9D0D5 440 aa12.4□□□□□ -0.43
Nedd1-201ENSMUST00000020163 Igf1rQ60751 1373 aa12.39□□□□□ -0.43
Nedd1-201ENSMUST00000020163 Nphp4P59240 1425 aa12.39□□□□□ -0.43
Nedd1-201ENSMUST00000020163 Sart1Q9Z315 806 aaKnown RBP12.39□□□□□ -0.43
Nedd1-201ENSMUST00000020163 ShprhQ7TPQ3 1674 aa12.38□□□□□ -0.43
Nedd1-201ENSMUST00000020163 Abca9Q8K449 1623 aa12.38□□□□□ -0.43
Nedd1-201ENSMUST00000020163 Scaf11E9PZM7 1456 aaKnown RBP12.38□□□□□ -0.43
Nedd1-201ENSMUST00000020163 Becn1O88597 448 aa12.38□□□□□ -0.43
Nedd1-201ENSMUST00000020163 P2rx7Q9Z1M0 595 aa12.38□□□□□ -0.43
Nedd1-201ENSMUST00000020163 Cdc42bpbQ7TT50 1713 aa12.38□□□□□ -0.43
Nedd1-201ENSMUST00000020163 Prdm16A2A935 1275 aa12.38□□□□□ -0.43
Nedd1-201ENSMUST00000020163 Ttc37F8VPK0 1563 aa12.38□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 37.3 ms