RNA–Protein interactions for RNA: ENSMUST00000004201.7

Col5a3-201, Transcript of Collagen type V alpha 3 chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a3, Length 6,119 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a3-201ENSMUST00000004201 Bcl11bQ99PV8 884 aa17.39■□□□□ 0.37
Col5a3-201ENSMUST00000004201 Trim55G3X8Y1 545 aa17.39■□□□□ 0.37
Col5a3-201ENSMUST00000004201 Nutm1Q8BHP2 1126 aa17.39■□□□□ 0.37
Col5a3-201ENSMUST00000004201 Fyb1O35601 819 aa17.39■□□□□ 0.37
Col5a3-201ENSMUST00000004201 Q8C5K5 320 aa17.39■□□□□ 0.37
Col5a3-201ENSMUST00000004201 Tdrd9Q14BI7 1383 aa17.38■□□□□ 0.37
Col5a3-201ENSMUST00000004201 March6Q6ZQ89 909 aa17.38■□□□□ 0.37
Col5a3-201ENSMUST00000004201 Nol12Q8BG17 217 aa17.38■□□□□ 0.37
Col5a3-201ENSMUST00000004201 Ccdc183A2AJB1 534 aa17.38■□□□□ 0.37
Col5a3-201ENSMUST00000004201 Hdgfl1Q2VPR5 283 aa17.37■□□□□ 0.37
Col5a3-201ENSMUST00000004201 Gnai1B2RSH2 354 aa17.37■□□□□ 0.37
Col5a3-201ENSMUST00000004201 KarsQ99MN1 595 aaKnown RBP17.37■□□□□ 0.37
Col5a3-201ENSMUST00000004201 Gnai3Q9DC51 354 aa17.37■□□□□ 0.37
Col5a3-201ENSMUST00000004201 PhaxQ9JJT9 385 aaKnown RBP17.37■□□□□ 0.37
Col5a3-201ENSMUST00000004201 Rbm25B2RY56 838 aaKnown RBP17.37■□□□□ 0.37
Col5a3-201ENSMUST00000004201 CrcpO35427 148 aa17.37■□□□□ 0.37
Col5a3-201ENSMUST00000004201 Sycp1Q62209 993 aa17.37■□□□□ 0.37
Col5a3-201ENSMUST00000004201 Tmco3Q8BH01 678 aa17.36■□□□□ 0.37
Col5a3-201ENSMUST00000004201 Ncoa2Q61026 1462 aa17.36■□□□□ 0.37
Col5a3-201ENSMUST00000004201 Atl3Q91YH5 541 aa17.36■□□□□ 0.37
Col5a3-201ENSMUST00000004201 Fnbp4Q6ZQ03 1031 aa17.35■□□□□ 0.37
Col5a3-201ENSMUST00000004201 Gsto1O09131 240 aa17.35■□□□□ 0.37
Col5a3-201ENSMUST00000004201 Phf14Q9D4H9 881 aa17.35■□□□□ 0.37
Col5a3-201ENSMUST00000004201 Erc2Q6PH08 957 aa17.35■□□□□ 0.37
Col5a3-201ENSMUST00000004201 Usp48Q3V0C5 1052 aa17.34■□□□□ 0.37
Col5a3-201ENSMUST00000004201 BcanQ61361 883 aa17.34■□□□□ 0.37
Col5a3-201ENSMUST00000004201 Swt1Q9DBQ9 907 aa17.34■□□□□ 0.37
Col5a3-201ENSMUST00000004201 Cfdp1O88271 295 aaKnown RBP17.34■□□□□ 0.37
Col5a3-201ENSMUST00000004201 Bcl2l13P59017 434 aa17.34■□□□□ 0.37
Col5a3-201ENSMUST00000004201 Ttll5Q8CHB8 1328 aa17.34■□□□□ 0.37
Col5a3-201ENSMUST00000004201 Gsdma3Q5Y4Y6 464 aa17.33■□□□□ 0.37
Col5a3-201ENSMUST00000004201 Chrna2Q91X60 512 aa17.33■□□□□ 0.37
Col5a3-201ENSMUST00000004201 Paf1Q8K2T8 535 aa17.33■□□□□ 0.37
Col5a3-201ENSMUST00000004201 TimelessQ9R1X4 1197 aa17.33■□□□□ 0.36
Col5a3-201ENSMUST00000004201 Prkrip1Q9CWV6 186 aaKnown RBP17.33■□□□□ 0.36
Col5a3-201ENSMUST00000004201 Cchcr1Q8K2I2 770 aa17.33■□□□□ 0.36
Col5a3-201ENSMUST00000004201 Nek4Q9Z1J2 792 aa17.32■□□□□ 0.36
Col5a3-201ENSMUST00000004201 Nop14Q8R3N1 860 aaKnown RBP17.32■□□□□ 0.36
Col5a3-201ENSMUST00000004201 PdcQ9QW08 244 aa17.32■□□□□ 0.36
Col5a3-201ENSMUST00000004201 Dhx29Q6PGC1 1365 aaKnown RBP17.32■□□□□ 0.36
Col5a3-201ENSMUST00000004201 Sv2bQ8BG39 683 aa17.31■□□□□ 0.36
Col5a3-201ENSMUST00000004201 Cux1P53564 1515 aa17.31■□□□□ 0.36
Col5a3-201ENSMUST00000004201 Cfap99A0A140LIX9 648 aa17.31■□□□□ 0.36
Col5a3-201ENSMUST00000004201 Fmnl2A2APV2 1086 aa17.3■□□□□ 0.36
Col5a3-201ENSMUST00000004201 Soga1E1U8D0 1418 aa17.3■□□□□ 0.36
Col5a3-201ENSMUST00000004201 Cep112Q5PR68 954 aa17.3■□□□□ 0.36
Col5a3-201ENSMUST00000004201 Cyp46a1Q9WVK8 500 aa17.3■□□□□ 0.36
Col5a3-201ENSMUST00000004201 NexnQ7TPW1 607 aa17.3■□□□□ 0.36
Col5a3-201ENSMUST00000004201 Ccar2Q8VDP4 922 aaKnown RBP17.3■□□□□ 0.36
Col5a3-201ENSMUST00000004201 Fez1Q8K0X8 392 aa17.3■□□□□ 0.36
Col5a3-201ENSMUST00000004201 Znf704Q9ERQ3 566 aa17.3■□□□□ 0.36
Col5a3-201ENSMUST00000004201 Stk3Q9JI10 497 aa17.3■□□□□ 0.36
Col5a3-201ENSMUST00000004201 Gprasp1Q5U4C1 1347 aa17.29■□□□□ 0.36
Col5a3-201ENSMUST00000004201 Ttll13A4Q9F6 804 aa17.29■□□□□ 0.36
Col5a3-201ENSMUST00000004201 NefhP19246 1090 aa17.29■□□□□ 0.36
Col5a3-201ENSMUST00000004201 Mex3cQ05A36 652 aaKnown RBP17.29■□□□□ 0.36
Col5a3-201ENSMUST00000004201 Cetn4Q8K4K1 168 aa17.29■□□□□ 0.36
Col5a3-201ENSMUST00000004201 Shroom4Q1W617 1475 aa17.29■□□□□ 0.36
Col5a3-201ENSMUST00000004201 Ints3Q7TPD0 1041 aaKnown RBP17.29■□□□□ 0.36
Col5a3-201ENSMUST00000004201 Me1P06801 572 aa17.28■□□□□ 0.36
Col5a3-201ENSMUST00000004201 Gtf2f1Q3THK3 508 aaKnown RBP17.28■□□□□ 0.36
Col5a3-201ENSMUST00000004201 Mphosph10Q810V0 681 aaKnown RBP17.28■□□□□ 0.36
Col5a3-201ENSMUST00000004201 Tnpo1Q8BFY9 898 aaKnown RBP17.28■□□□□ 0.36
Col5a3-201ENSMUST00000004201 Trim29Q8R2Q0 587 aa17.27■□□□□ 0.36
Col5a3-201ENSMUST00000004201 Nsd2Q8BVE8 1365 aa17.27■□□□□ 0.36
Col5a3-201ENSMUST00000004201 Olfml1Q8BSH2 233 aa17.27■□□□□ 0.36
Col5a3-201ENSMUST00000004201 Puf60Q3UEB3 564 aaKnown RBP17.27■□□□□ 0.36
Col5a3-201ENSMUST00000004201 Plekhh1Q80TI1 1356 aa17.27■□□□□ 0.35
Col5a3-201ENSMUST00000004201 Ankrd36D3Z4K0 1415 aa17.27■□□□□ 0.35
Col5a3-201ENSMUST00000004201 Eva1cP58659 440 aa17.27■□□□□ 0.35
Col5a3-201ENSMUST00000004201 Jph4Q80WT0 628 aa17.26■□□□□ 0.35
Col5a3-201ENSMUST00000004201 Ppp2r3aB2RXC8 1150 aa17.26■□□□□ 0.35
Col5a3-201ENSMUST00000004201 Paxip1Q6NZQ4 1056 aa17.26■□□□□ 0.35
Col5a3-201ENSMUST00000004201 PnisrA2AJT4 805 aaKnown RBP17.25■□□□□ 0.35
Col5a3-201ENSMUST00000004201 Trim30cD3YVI9 513 aa17.25■□□□□ 0.35
Col5a3-201ENSMUST00000004201 Psma5Q9Z2U1 241 aaKnown RBP17.25■□□□□ 0.35
Col5a3-201ENSMUST00000004201 CastP51125 788 aa17.25■□□□□ 0.35
Col5a3-201ENSMUST00000004201 Stk11ipQ3TAA7 1072 aa17.25■□□□□ 0.35
Col5a3-201ENSMUST00000004201 Ccdc102aQ3TMW1 549 aa17.25■□□□□ 0.35
Col5a3-201ENSMUST00000004201 Iqgap2Q3UQ44 1575 aa17.25■□□□□ 0.35
Col5a3-201ENSMUST00000004201 Gbp4Q61107 620 aa17.25■□□□□ 0.35
Col5a3-201ENSMUST00000004201 1700010I14RikQ7TPG0 532 aa17.24■□□□□ 0.35
Col5a3-201ENSMUST00000004201 Q9D9H8 365 aa17.24■□□□□ 0.35
Col5a3-201ENSMUST00000004201 Atp2b2Q9R0K7 1198 aa17.24■□□□□ 0.35
Col5a3-201ENSMUST00000004201 TatQ8QZR1 454 aa17.23■□□□□ 0.35
Col5a3-201ENSMUST00000004201 Polr1aO35134 1717 aaKnown RBP17.23■□□□□ 0.35
Col5a3-201ENSMUST00000004201 Gm10471E9Q1C7 252 aa17.23■□□□□ 0.35
Col5a3-201ENSMUST00000004201 OptnQ8K3K8 584 aa17.23■□□□□ 0.35
Col5a3-201ENSMUST00000004201 SelenooQ9DBC0 667 aa17.23■□□□□ 0.35
Col5a3-201ENSMUST00000004201 Q7TT23 1179 aa17.23■□□□□ 0.35
Col5a3-201ENSMUST00000004201 Erlin2Q8BFZ9 340 aa17.22■□□□□ 0.35
Col5a3-201ENSMUST00000004201 AnlnQ8K298 1121 aaKnown RBP17.22■□□□□ 0.35
Col5a3-201ENSMUST00000004201 Zpr1Q62384 459 aa17.22■□□□□ 0.35
Col5a3-201ENSMUST00000004201 ItpripQ3TNL8 555 aa17.22■□□□□ 0.35
Col5a3-201ENSMUST00000004201 Frmd3Q8BHD4 595 aa17.22■□□□□ 0.35
Col5a3-201ENSMUST00000004201 Abl1P00520 1123 aa17.22■□□□□ 0.35
Col5a3-201ENSMUST00000004201 Zfp644E9QA22 1323 aa17.21■□□□□ 0.35
Col5a3-201ENSMUST00000004201 FanciQ8K368 1330 aa17.21■□□□□ 0.35
Col5a3-201ENSMUST00000004201 Dhx8A2A4P0 1244 aaKnown RBP17.21■□□□□ 0.35
Col5a3-201ENSMUST00000004201 SkilQ60665 675 aa17.21■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 13.2 ms