RNA–Protein interactions for RNA: ENSMUST00000003599.8

Pcdhgb6-201, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhgb6, Length 4,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb6-201ENSMUST00000003599 Rfx7F8VPJ6 1459 aa15.06■□□□□ 0
Pcdhgb6-201ENSMUST00000003599 PsapQ61207 557 aaKnown RBP15.06■□□□□ 0
Pcdhgb6-201ENSMUST00000003599 Thoc2B1AZI6 1594 aaKnown RBP15.06■□□□□ 0
Pcdhgb6-201ENSMUST00000003599 CgnP59242 1191 aa15.05■□□□□ 0
Pcdhgb6-201ENSMUST00000003599 Fkbp4P30416 458 aa15.05■□□□□ 0
Pcdhgb6-201ENSMUST00000003599 Neurod6P48986 337 aa15.05■□□□□ -0
Pcdhgb6-201ENSMUST00000003599 Cabp2Q9JLK4 216 aa15.05■□□□□ -0
Pcdhgb6-201ENSMUST00000003599 Abcc1O35379 1528 aa15.05■□□□□ -0
Pcdhgb6-201ENSMUST00000003599 Trappc8E9PWG2 1437 aa15.05■□□□□ -0
Pcdhgb6-201ENSMUST00000003599 IbtkQ6ZPR6 1352 aaKnown RBP15.04■□□□□ -0
Pcdhgb6-201ENSMUST00000003599 Sugp2Q8CH09 1067 aa15.04■□□□□ -0
Pcdhgb6-201ENSMUST00000003599 Dhx16G3X8X0 1044 aaKnown RBP15.04■□□□□ -0
Pcdhgb6-201ENSMUST00000003599 Mphosph10Q810V0 681 aaKnown RBP15.04■□□□□ -0
Pcdhgb6-201ENSMUST00000003599 Nutm1Q8BHP2 1126 aa15.04■□□□□ -0
Pcdhgb6-201ENSMUST00000003599 Gm21663A0A0G2JE01 267 aa15.04■□□□□ -0
Pcdhgb6-201ENSMUST00000003599 Gm7361D3Z6R1 267 aa15.04■□□□□ -0
Pcdhgb6-201ENSMUST00000003599 5031410I06RikE9Q4E0 267 aa15.04■□□□□ -0
Pcdhgb6-201ENSMUST00000003599 Gm1979E9QAN3 267 aa15.04■□□□□ -0
Pcdhgb6-201ENSMUST00000003599 Gm5862K7N5V5 267 aa15.04■□□□□ -0
Pcdhgb6-201ENSMUST00000003599 Gm10220K7N660 267 aa15.04■□□□□ -0
Pcdhgb6-201ENSMUST00000003599 Cald1E9QA15 768 aaKnown RBP15.04■□□□□ -0
Pcdhgb6-201ENSMUST00000003599 4930572O03RikQ8C5Y0 211 aa15.04■□□□□ -0
Pcdhgb6-201ENSMUST00000003599 Zeb2Q9R0G7 1215 aa15.04■□□□□ -0
Pcdhgb6-201ENSMUST00000003599 Samd9lQ69Z37 1561 aa15.04■□□□□ -0
Pcdhgb6-201ENSMUST00000003599 Kif16bB1AVY7 1312 aa15.03■□□□□ -0
Pcdhgb6-201ENSMUST00000003599 WizO88286 1684 aaKnown RBP15.03■□□□□ -0
Pcdhgb6-201ENSMUST00000003599 Smarce1O54941 411 aaKnown RBP15.02■□□□□ -0
Pcdhgb6-201ENSMUST00000003599 Pank1Q8K4K6 548 aa15.02■□□□□ -0
Pcdhgb6-201ENSMUST00000003599 Kcnh5Q920E3 988 aa15.02■□□□□ -0
Pcdhgb6-201ENSMUST00000003599 PrxO55103 1391 aa15.02□□□□□ -0.01
Pcdhgb6-201ENSMUST00000003599 Dusp27Q148W8 1138 aa15.02□□□□□ -0.01
Pcdhgb6-201ENSMUST00000003599 Rbm5Q91YE7 815 aaKnown RBP15.01□□□□□ -0.01
Pcdhgb6-201ENSMUST00000003599 Rapgef6Q5NCJ1 1609 aa15.01□□□□□ -0.01
Pcdhgb6-201ENSMUST00000003599 Eif4g1Q6NZJ6 1600 aaKnown RBP15.01□□□□□ -0.01
Pcdhgb6-201ENSMUST00000003599 Slc4a2P13808 1237 aaKnown RBP15.01□□□□□ -0.01
Pcdhgb6-201ENSMUST00000003599 Pcmtd1P59913 357 aa15.01□□□□□ -0.01
Pcdhgb6-201ENSMUST00000003599 R3hcc1Q8BSI6 488 aa15.01□□□□□ -0.01
Pcdhgb6-201ENSMUST00000003599 BC005561E9Q5E2 1589 aa15□□□□□ -0.01
Pcdhgb6-201ENSMUST00000003599 Kif21aQ9QXL2 1672 aa15□□□□□ -0.01
Pcdhgb6-201ENSMUST00000003599 Acsbg1Q99PU5 721 aa15□□□□□ -0.01
Pcdhgb6-201ENSMUST00000003599 PalmQ9Z0P4 383 aa15□□□□□ -0.01
Pcdhgb6-201ENSMUST00000003599 Ccdc171E9Q1U1 1324 aa15□□□□□ -0.01
Pcdhgb6-201ENSMUST00000003599 Gm1043A0A140LJC2 1431 aa15□□□□□ -0.01
Pcdhgb6-201ENSMUST00000003599 Slc5a4bQ91ZP4 660 aa14.99□□□□□ -0.01
Pcdhgb6-201ENSMUST00000003599 Atp6v1dP57746 247 aa14.99□□□□□ -0.01
Pcdhgb6-201ENSMUST00000003599 CrebrfQ8CDG5 640 aaKnown RBP14.99□□□□□ -0.01
Pcdhgb6-201ENSMUST00000003599 Slx4Q6P1D7 1565 aa14.99□□□□□ -0.01
Pcdhgb6-201ENSMUST00000003599 Wdr7Q920I9 1489 aa14.99□□□□□ -0.01
Pcdhgb6-201ENSMUST00000003599 CatipB9EKE5 520 aa14.98□□□□□ -0.01
Pcdhgb6-201ENSMUST00000003599 AampJ3QN89 436 aa14.98□□□□□ -0.01
Pcdhgb6-201ENSMUST00000003599 TmpoQ61033 693 aaKnown RBP14.98□□□□□ -0.01
Pcdhgb6-201ENSMUST00000003599 Asxl1P59598 1514 aa14.98□□□□□ -0.01
Pcdhgb6-201ENSMUST00000003599 Ggnbp2Q5SV77 696 aa14.98□□□□□ -0.01
Pcdhgb6-201ENSMUST00000003599 Tomm22Q9CPQ3 142 aa14.98□□□□□ -0.01
Pcdhgb6-201ENSMUST00000003599 Fam50bQ9WTJ8 334 aa14.98□□□□□ -0.01
Pcdhgb6-201ENSMUST00000003599 Kdm5bQ80Y84 1544 aa14.97□□□□□ -0.01
Pcdhgb6-201ENSMUST00000003599 Polr3aB2RXC6 1390 aa14.97□□□□□ -0.01
Pcdhgb6-201ENSMUST00000003599 Plekhh1Q80TI1 1356 aa14.97□□□□□ -0.01
Pcdhgb6-201ENSMUST00000003599 Nup160Q9Z0W3 1402 aaKnown RBP14.97□□□□□ -0.01
Pcdhgb6-201ENSMUST00000003599 Gimap5Q8BWF2 308 aa14.97□□□□□ -0.01
Pcdhgb6-201ENSMUST00000003599 CrcpO35427 148 aa14.96□□□□□ -0.01
Pcdhgb6-201ENSMUST00000003599 Zfp444Q3TDV8 331 aaKnown RBP14.96□□□□□ -0.01
Pcdhgb6-201ENSMUST00000003599 Fchsd2Q3USJ8 740 aa14.96□□□□□ -0.01
Pcdhgb6-201ENSMUST00000003599 Stard3nlQ9DCI3 235 aa14.96□□□□□ -0.01
Pcdhgb6-201ENSMUST00000003599 Eif3bQ8JZQ9 803 aaKnown RBP14.96□□□□□ -0.01
Pcdhgb6-201ENSMUST00000003599 Farp2Q91VS8 1065 aa14.96□□□□□ -0.01
Pcdhgb6-201ENSMUST00000003599 Ccdc47Q9D024 483 aaKnown RBP14.96□□□□□ -0.01
Pcdhgb6-201ENSMUST00000003599 Ddx11Q6AXC6 880 aa14.95□□□□□ -0.02
Pcdhgb6-201ENSMUST00000003599 ApobrQ8VBT6 942 aa14.95□□□□□ -0.02
Pcdhgb6-201ENSMUST00000003599 Tpm3-rs7D3Z2H9 248 aa14.95□□□□□ -0.02
Pcdhgb6-201ENSMUST00000003599 Prex2Q3LAC4 1598 aa14.94□□□□□ -0.02
Pcdhgb6-201ENSMUST00000003599 TnnQ80Z71 1560 aa14.94□□□□□ -0.02
Pcdhgb6-201ENSMUST00000003599 Q9D2X8 372 aa14.94□□□□□ -0.02
Pcdhgb6-201ENSMUST00000003599 Erc2Q6PH08 957 aa14.94□□□□□ -0.02
Pcdhgb6-201ENSMUST00000003599 Tmem94Q7TSH8 1360 aa14.94□□□□□ -0.02
Pcdhgb6-201ENSMUST00000003599 Noc3lQ8VI84 807 aaKnown RBP14.93□□□□□ -0.02
Pcdhgb6-201ENSMUST00000003599 Cplx2P84086 134 aa14.92□□□□□ -0.02
Pcdhgb6-201ENSMUST00000003599 TimelessQ9R1X4 1197 aa14.92□□□□□ -0.02
Pcdhgb6-201ENSMUST00000003599 Gprasp1Q5U4C1 1347 aa14.92□□□□□ -0.02
Pcdhgb6-201ENSMUST00000003599 Idi2Q8BFZ6 227 aa14.92□□□□□ -0.02
Pcdhgb6-201ENSMUST00000003599 Atl3Q91YH5 541 aa14.92□□□□□ -0.02
Pcdhgb6-201ENSMUST00000003599 Sytl4Q9R0Q1 673 aa14.92□□□□□ -0.02
Pcdhgb6-201ENSMUST00000003599 Tom1O88746 492 aa14.92□□□□□ -0.02
Pcdhgb6-201ENSMUST00000003599 Atp7aQ64430 1491 aa14.91□□□□□ -0.02
Pcdhgb6-201ENSMUST00000003599 PrkcshO08795 521 aa14.91□□□□□ -0.02
Pcdhgb6-201ENSMUST00000003599 Gm973E9Q295 1059 aa14.91□□□□□ -0.02
Pcdhgb6-201ENSMUST00000003599 Ccne1Q61457 408 aa14.91□□□□□ -0.02
Pcdhgb6-201ENSMUST00000003599 Btbd11Q6GQW0 1109 aa14.9□□□□□ -0.02
Pcdhgb6-201ENSMUST00000003599 Flad1Q8R123 492 aa14.9□□□□□ -0.02
Pcdhgb6-201ENSMUST00000003599 Ccer1Q9CQL2 403 aa14.9□□□□□ -0.02
Pcdhgb6-201ENSMUST00000003599 3425401B19RikD3Z1D3 1412 aa14.9□□□□□ -0.02
Pcdhgb6-201ENSMUST00000003599 Ppp1r15aP17564 657 aa14.9□□□□□ -0.02
Pcdhgb6-201ENSMUST00000003599 Trim34aQ99PP6 485 aa14.9□□□□□ -0.02
Pcdhgb6-201ENSMUST00000003599 Filip1lQ6P6L0 1131 aa14.9□□□□□ -0.02
Pcdhgb6-201ENSMUST00000003599 Dennd4bQ3U1Y4 1499 aa14.89□□□□□ -0.03
Pcdhgb6-201ENSMUST00000003599 Rprd2Q6NXI6 1469 aaKnown RBP14.89□□□□□ -0.03
Pcdhgb6-201ENSMUST00000003599 Rapgef4Q9EQZ6 1011 aa14.89□□□□□ -0.03
Pcdhgb6-201ENSMUST00000003599 Hmox1P14901 289 aa14.89□□□□□ -0.03
Pcdhgb6-201ENSMUST00000003599 Rnf20Q5DTM8 973 aa14.89□□□□□ -0.03
Pcdhgb6-201ENSMUST00000003599 Cetn4Q8K4K1 168 aa14.89□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 31.7 ms