RNA–Protein interactions for RNA: YNL039W

BDP1, Transcript of Essential subunit of RNA polymerase III transcription factor (TFIIIB), yeastyeast

Gene BDP1, Length 1,785 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDP1YNL039W HKR1P41809 1802 aa1.56□□□□□ -2.16
BDP1YNL039W UFD4P33202 1483 aa1.55□□□□□ -2.16
BDP1YNL039W ATX1P38636 73 aa1.54□□□□□ -2.16
BDP1YNL039W YFL041W-AQ3E817 63 aa1.52□□□□□ -2.17
BDP1YNL039W YBR032WP38223 100 aa1.51□□□□□ -2.17
BDP1YNL039W TY2B-LR1P0C2J3 1770 aa1.51□□□□□ -2.17
BDP1YNL039W TY2B-FP0CX63 1770 aa1.51□□□□□ -2.17
BDP1YNL039W TY2B-GR2P0CX64 1770 aa1.51□□□□□ -2.17
BDP1YNL039W TY2B-DR2Q03494 1770 aa1.51□□□□□ -2.17
BDP1YNL039W TY2B-OR1Q12113 1770 aa1.51□□□□□ -2.17
BDP1YNL039W TY2B-BQ12491 1770 aa1.51□□□□□ -2.17
BDP1YNL039W TY2B-OR2Q12501 1770 aa1.51□□□□□ -2.17
BDP1YNL039W RPS29BP41058 56 aaKnown RBP1.5□□□□□ -2.17
BDP1YNL039W ATP17Q06405 101 aa1.49□□□□□ -2.17
BDP1YNL039W PAU7P39545 55 aa1.49□□□□□ -2.17
BDP1YNL039W APC1P53886 1748 aa1.49□□□□□ -2.17
BDP1YNL039W PMD1P32634 1753 aa1.49□□□□□ -2.17
BDP1YNL039W TCB3Q03640 1545 aaKnown RBP1.48□□□□□ -2.17
BDP1YNL039W SSS1P35179 80 aa1.48□□□□□ -2.17
BDP1YNL039W YKL018C-AQ3E7A7 99 aa1.48□□□□□ -2.17
BDP1YNL039W YOR032W-AQ8TGS1 66 aa1.48□□□□□ -2.17
BDP1YNL039W TY2B-DR3Q07791 1770 aaKnown RBP1.48□□□□□ -2.17
BDP1YNL039W YFR009W-AP0C5M9 85 aa1.47□□□□□ -2.17
BDP1YNL039W YBR016WP38216 128 aa1.47□□□□□ -2.17
BDP1YNL039W SCC2Q04002 1493 aa1.46□□□□□ -2.18
BDP1YNL039W EDC1P53080 175 aaPredicted RBP1.46□□□□□ -2.18
BDP1YNL039W YIL134C-AQ45U18 67 aa1.46□□□□□ -2.18
BDP1YNL039W SPI1P40092 148 aa1.44□□□□□ -2.18
BDP1YNL039W ERI1P62651 68 aaKnown RBP1.44□□□□□ -2.18
BDP1YNL039W DNF1P32660 1571 aa1.4□□□□□ -2.19
BDP1YNL039W IML1P47170 1584 aa1.38□□□□□ -2.19
BDP1YNL039W YLR146W-AQ2V2P1 62 aa1.38□□□□□ -2.19
BDP1YNL039W RRP5Q05022 1729 aaKnown RBP1.36□□□□□ -2.19
BDP1YNL039W VPS15P22219 1454 aa1.35□□□□□ -2.19
BDP1YNL039W ARO1P08566 1588 aaKnown RBP1.35□□□□□ -2.19
BDP1YNL039W SEN1Q00416 2231 aaKnown RBP1.34□□□□□ -2.19
BDP1YNL039W TAO3P40468 2376 aa1.33□□□□□ -2.2
BDP1YNL039W FKS3Q04952 1785 aa1.33□□□□□ -2.2
BDP1YNL039W DNF2Q12675 1612 aa1.33□□□□□ -2.2
BDP1YNL039W YSY6P38374 65 aa1.33□□□□□ -2.2
BDP1YNL039W YDR246W-AQ3E763 66 aa1.33□□□□□ -2.2
BDP1YNL039W HUB1Q6Q546 73 aa1.33□□□□□ -2.2
BDP1YNL039W MYO4P32492 1471 aa1.32□□□□□ -2.2
BDP1YNL039W YOL131WQ08270 108 aa1.32□□□□□ -2.2
BDP1YNL039W IQG1Q12280 1495 aa1.32□□□□□ -2.2
BDP1YNL039W SMC4Q12267 1418 aa1.31□□□□□ -2.2
BDP1YNL039W YIL102C-AQ2V2P5 75 aa1.29□□□□□ -2.2
BDP1YNL039W RPO31P04051 1460 aa1.29□□□□□ -2.2
BDP1YNL039W YBR200W-AQ3E755 54 aa1.29□□□□□ -2.2
BDP1YNL039W YBL039W-BP0C268 59 aa1.27□□□□□ -2.21
BDP1YNL039W YGR025WP53216 100 aa1.27□□□□□ -2.21
BDP1YNL039W YDR182W-AQ3E796 67 aa1.26□□□□□ -2.21
BDP1YNL039W YFR010W-AP0C5N0 62 aa1.26□□□□□ -2.21
BDP1YNL039W YOR011W-AQ3E807 68 aa1.26□□□□□ -2.21
BDP1YNL039W KOG1P38873 1557 aa1.24□□□□□ -2.21
BDP1YNL039W RPS30AP0CX33 63 aaKnown RBP1.24□□□□□ -2.21
BDP1YNL039W RPS30BP0CX34 63 aaKnown RBP1.24□□□□□ -2.21
BDP1YNL039W RPS27AP35997 82 aaKnown RBP1.24□□□□□ -2.21
BDP1YNL039W YBL044WP38194 122 aa1.24□□□□□ -2.21
BDP1YNL039W OLI1P61829 76 aa1.23□□□□□ -2.21
BDP1YNL039W YOR394C-AQ8TGJ0 55 aa1.23□□□□□ -2.21
BDP1YNL039W IRC20Q06554 1556 aa1.22□□□□□ -2.21
BDP1YNL039W VMA9Q3E7B6 73 aa1.21□□□□□ -2.22
BDP1YNL039W TY3B-GQ99315 1547 aa1.2□□□□□ -2.22
BDP1YNL039W MMS1Q06211 1407 aa1.18□□□□□ -2.22
BDP1YNL039W BCK1Q01389 1478 aa1.13□□□□□ -2.23
BDP1YNL039W PDR12Q02785 1511 aa1.13□□□□□ -2.23
BDP1YNL039W RPO21P04050 1733 aaKnown RBP1.13□□□□□ -2.23
BDP1YNL039W YCR108CQ3E819 63 aa1.11□□□□□ -2.23
BDP1YNL039W YOL166W-AQ8TGJ1 51 aa1.11□□□□□ -2.23
BDP1YNL039W VMR1P38735 1592 aa1.1□□□□□ -2.23
BDP1YNL039W HAP1P0CE41 1502 aa1.09□□□□□ -2.24
BDP1YNL039W SIP18P50263 79 aa1.08□□□□□ -2.24
BDP1YNL039W YMR001C-AQ8TGS9 76 aa1.08□□□□□ -2.24
BDP1YNL039W SPO14P36126 1683 aa1.04□□□□□ -2.24
BDP1YNL039W YLR157W-DP0CE99 70 aa1.03□□□□□ -2.24
BDP1YNL039W PDR15Q04182 1529 aaKnown RBP1.03□□□□□ -2.24
BDP1YNL039W YOR008C-AQ3E7B9 74 aa1□□□□□ -2.25
BDP1YNL039W VTH1P40438 1549 aa0.99□□□□□ -2.25
BDP1YNL039W VTH2P40890 1549 aa0.99□□□□□ -2.25
BDP1YNL039W PDR5P33302 1511 aaKnown RBP0.98□□□□□ -2.25
BDP1YNL039W YBR230W-AQ3E762 66 aa0.97□□□□□ -2.25
BDP1YNL039W YKL023C-AQ2V2P3 75 aa0.96□□□□□ -2.26
BDP1YNL039W RPS27BP38711 82 aa0.94□□□□□ -2.26
BDP1YNL039W TOS6P48560 102 aa0.93□□□□□ -2.26
BDP1YNL039W YOR192C-CQ3E736 78 aa0.91□□□□□ -2.26
BDP1YNL039W YBT1P32386 1661 aa0.91□□□□□ -2.26
BDP1YNL039W CDC25P04821 1589 aa0.9□□□□□ -2.27
BDP1YNL039W YCF1P39109 1515 aaKnown RBP0.88□□□□□ -2.27
BDP1YNL039W SPT6P23615 1451 aaKnown RBP0.85□□□□□ -2.27
BDP1YNL039W MON2P48563 1636 aaPredicted RBP0.84□□□□□ -2.28
BDP1YNL039W TY1B-DR4Q07793 1604 aa0.84□□□□□ -2.28
BDP1YNL039W YGR146C-AQ8TGT9 53 aa0.83□□□□□ -2.28
BDP1YNL039W SNQ2P32568 1501 aaKnown RBP0.82□□□□□ -2.28
BDP1YNL039W UTP20P35194 2493 aaKnown RBP0.82□□□□□ -2.28
BDP1YNL039W YOR093CQ12275 1648 aa0.8□□□□□ -2.28
BDP1YNL039W RPS29AP41057 56 aaKnown RBP0.78□□□□□ -2.28
BDP1YNL039W NUP188P52593 1655 aaKnown RBP0.77□□□□□ -2.29
BDP1YNL039W YBR056W-AI2HB52 66 aa0.76□□□□□ -2.29
BDP1YNL039W SSK2P53599 1579 aa0.74□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms